ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01057:01056

Extra

PDB:
ATOM 1 O3' A A1056 21.830 91.679 110.545 1.00 40.00 O
ATOM 2 P A A1057 22.378 91.943 112.028 1.00 39.18 P
ATOM 3 OP1 A A1057 22.954 90.664 112.499 1.00 38.71 O
ATOM 4 OP2 A A1057 21.322 92.605 112.827 1.00 39.11 O
ATOM 5 O5' A A1057 23.558 92.981 111.804 1.00 38.05 O
ATOM 6 C5' A A1057 24.773 92.591 111.147 1.00 38.07 C
ATOM 7 C4' A A1057 25.583 93.813 110.805 1.00 37.74 C
ATOM 8 O4' A A1057 24.839 94.609 109.855 1.00 38.03 O
ATOM 9 C3' A A1057 25.834 94.767 111.960 1.00 37.85 C
ATOM 10 O3' A A1057 26.957 94.369 112.729 1.00 39.13 O
ATOM 11 C2' A A1057 26.080 96.085 111.249 1.00 37.10 C
ATOM 12 O2' A A1057 27.394 96.194 110.751 1.00 37.29 O
ATOM 13 C1' A A1057 25.098 95.982 110.081 1.00 38.55 C
ATOM 14 N9 A A1057 23.834 96.672 110.334 1.00 39.23 N
ATOM 15 C8 A A1057 22.727 96.227 111.013 1.00 39.39 C
ATOM 16 N7 A A1057 21.779 97.126 111.123 1.00 39.73 N
ATOM 17 C5 A A1057 22.289 98.233 110.458 1.00 40.65 C
ATOM 18 C6 A A1057 21.779 99.529 110.234 1.00 40.50 C
ATOM 19 N6 A A1057 20.600 99.953 110.685 1.00 41.37 N
ATOM 20 N1 A A1057 22.541 100.387 109.526 1.00 40.51 N
ATOM 21 C2 A A1057 23.733 99.970 109.083 1.00 40.72 C
ATOM 22 N3 A A1057 24.324 98.789 109.236 1.00 39.94 N
ATOM 23 C4 A A1057 23.543 97.957 109.945 1.00 40.21 C
ATOM 24 P G A1058 26.966 94.611 114.315 1.00 41.50 P
ATOM 25 OP1 G A1058 28.382 94.500 114.719 1.00 40.21 O
ATOM 26 OP2 G A1058 25.955 93.733 114.953 1.00 41.46 O
ATOM 27 O5' G A1058 26.517 96.129 114.491 1.00 39.38 O
TER

ATOM 1 O3' U B1055 15.767 92.450 111.043 1.00 41.89 O
ATOM 2 P A B1056 17.165 92.681 111.774 1.00 40.99 P
ATOM 3 OP1 A B1056 17.501 91.474 112.568 1.00 40.82 O
ATOM 4 OP2 A B1056 17.065 94.000 112.444 1.00 39.84 O
ATOM 5 O5' A B1056 18.200 92.805 110.570 1.00 41.67 O
ATOM 6 C5' A B1056 18.667 91.647 109.846 1.00 40.51 C
ATOM 7 C4' A B1056 19.925 91.994 109.077 1.00 40.58 C
ATOM 8 O4' A B1056 19.608 92.961 108.047 1.00 39.97 O
ATOM 9 C3' A B1056 21.025 92.660 109.894 1.00 40.49 C
ATOM 10 O3' A B1056 21.830 91.679 110.545 1.00 40.00 O
ATOM 11 C2' A B1056 21.814 93.426 108.838 1.00 41.21 C
ATOM 12 O2' A B1056 22.753 92.632 108.147 1.00 41.54 O
ATOM 13 C1' A B1056 20.710 93.830 107.858 1.00 41.46 C
ATOM 14 N9 A B1056 20.258 95.217 107.974 1.00 42.51 N
ATOM 15 C8 A B1056 19.106 95.716 108.540 1.00 42.81 C
ATOM 16 N7 A B1056 18.998 97.021 108.456 1.00 42.09 N
ATOM 17 C5 A B1056 20.156 97.408 107.795 1.00 42.60 C
ATOM 18 C6 A B1056 20.640 98.662 107.393 1.00 41.72 C
ATOM 19 N6 A B1056 19.991 99.806 107.595 1.00 41.69 N
ATOM 20 N1 A B1056 21.832 98.699 106.761 1.00 42.31 N
ATOM 21 C2 A B1056 22.480 97.550 106.545 1.00 41.86 C
ATOM 22 N3 A B1056 22.128 96.313 106.866 1.00 40.50 N
ATOM 23 C4 A B1056 20.943 96.309 107.498 1.00 42.34 C
ATOM 24 P A B1057 22.378 91.943 112.028 1.00 39.18 P
ATOM 25 OP1 A B1057 22.954 90.664 112.499 1.00 38.71 O
ATOM 26 OP2 A B1057 21.322 92.605 112.827 1.00 39.11 O
ATOM 27 O5' A B1057 23.558 92.981 111.804 1.00 38.05 O
TER

Atoms:
OP1: (22.954,90.664,112.499)
OP2: (21.322,92.605,112.827)
C3': (25.834,94.767,111.960)
C1': (25.098,95.982,110.081)
C5': (24.773,92.591,111.147)
O4': (24.839,94.609,109.855)
C8: (22.727,96.227,111.013)
O2': (27.394,96.194,110.751)
C6: (21.779,99.529,110.234)
C5: (22.289,98.233,110.458)
C4: (23.543,97.957,109.945)
P: (22.378,91.943,112.028)
C4': (25.583,93.813,110.805)
C2': (26.080,96.085,111.249)
C2: (23.733,99.970,109.083)
N1: (22.541,100.387,109.526)
N3: (24.324,98.789,109.236)
N6: (20.600,99.953,110.685)
N7: (21.779,97.126,111.123)
N9: (23.834,96.672,110.334)
O5': (23.558,92.981,111.804)
O3': (26.957,94.369,112.729)
OP1: (17.501,91.474,112.568)
OP2: (17.065,94.000,112.444)
C3': (21.025,92.660,109.894)
C1': (20.710,93.830,107.858)
C5': (18.667,91.647,109.846)
O4': (19.608,92.961,108.047)
C8: (19.106,95.716,108.540)
O2': (22.753,92.632,108.147)
C6: (20.640,98.662,107.393)
C5: (20.156,97.408,107.795)
C4: (20.943,96.309,107.498)
P: (17.165,92.681,111.774)
C4': (19.925,91.994,109.077)
C2': (21.814,93.426,108.838)
C2: (22.480,97.550,106.545)
N1: (21.832,98.699,106.761)
N3: (22.128,96.313,106.866)
N6: (19.991,99.806,107.595)
N7: (18.998,97.021,108.456)
N9: (20.258,95.217,107.974)
O5': (18.200,92.805,110.570)
O3': (21.830,91.679,110.545)
Image (generated by PyMOL):
PyMOL image
show in jmol