Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01192:01191
Extra
PDB:
ATOM 1 O3' A A1191 53.408 116.887 126.179 1.00 44.16 O
ATOM 2 P A A1192 51.858 117.202 125.931 1.00 45.68 P
ATOM 3 OP1 A A1192 51.200 117.246 127.260 1.00 46.14 O
ATOM 4 OP2 A A1192 51.343 116.277 124.886 1.00 45.61 O
ATOM 5 O5' A A1192 51.857 118.679 125.353 1.00 45.12 O
ATOM 6 C5' A A1192 52.392 118.965 124.055 1.00 43.77 C
ATOM 7 C4' A A1192 53.622 119.820 124.191 1.00 42.14 C
ATOM 8 O4' A A1192 54.764 118.977 124.465 1.00 40.25 O
ATOM 9 C3' A A1192 54.053 120.546 122.933 1.00 40.60 C
ATOM 10 O3' A A1192 53.276 121.729 122.797 1.00 40.07 O
ATOM 11 C2' A A1192 55.507 120.884 123.245 1.00 40.04 C
ATOM 12 O2' A A1192 55.641 122.064 124.007 1.00 39.90 O
ATOM 13 C1' A A1192 55.933 119.681 124.097 1.00 40.25 C
ATOM 14 N9 A A1192 56.853 118.759 123.436 1.00 40.48 N
ATOM 15 C8 A A1192 56.690 118.082 122.254 1.00 41.31 C
ATOM 16 N7 A A1192 57.719 117.342 121.923 1.00 40.58 N
ATOM 17 C5 A A1192 58.615 117.539 122.960 1.00 39.37 C
ATOM 18 C6 A A1192 59.893 117.036 123.200 1.00 38.63 C
ATOM 19 N6 A A1192 60.521 116.197 122.380 1.00 38.14 N
ATOM 20 N1 A A1192 60.520 117.433 124.324 1.00 39.00 N
ATOM 21 C2 A A1192 59.893 118.286 125.141 1.00 40.19 C
ATOM 22 N3 A A1192 58.690 118.831 125.024 1.00 39.19 N
ATOM 23 C4 A A1192 58.095 118.409 123.899 1.00 39.74 C
ATOM 24 P U A1193 52.967 122.321 121.345 1.00 40.19 P
ATOM 25 OP1 U A1193 52.234 121.292 120.564 1.00 40.39 O
ATOM 26 OP2 U A1193 54.235 122.889 120.824 1.00 38.82 O
ATOM 27 O5' U A1193 51.955 123.511 121.633 1.00 40.36 O
TER
ATOM 1 O3' A B1190 53.603 112.649 131.189 1.00 42.64 O
ATOM 2 P A B1191 52.848 112.768 129.774 1.00 42.17 P
ATOM 3 OP1 A B1191 51.601 113.534 130.009 1.00 41.54 O
ATOM 4 OP2 A B1191 52.773 111.423 129.162 1.00 42.57 O
ATOM 5 O5' A B1191 53.811 113.691 128.903 1.00 41.47 O
ATOM 6 C5' A B1191 54.006 115.062 129.272 1.00 42.26 C
ATOM 7 C4' A B1191 54.455 115.888 128.090 1.00 42.83 C
ATOM 8 O4' A B1191 55.869 115.698 127.864 1.00 42.07 O
ATOM 9 C3' A B1191 53.774 115.645 126.746 1.00 43.50 C
ATOM 10 O3' A B1191 53.408 116.887 126.179 1.00 44.16 O
ATOM 11 C2' A B1191 54.886 115.038 125.897 1.00 43.88 C
ATOM 12 O2' A B1191 54.757 115.390 124.537 1.00 44.76 O
ATOM 13 C1' A B1191 56.111 115.727 126.482 1.00 44.36 C
ATOM 14 N9 A B1191 57.395 115.072 126.229 1.00 46.02 N
ATOM 15 C8 A B1191 57.668 113.985 125.433 1.00 47.17 C
ATOM 16 N7 A B1191 58.933 113.643 125.426 1.00 48.39 N
ATOM 17 C5 A B1191 59.533 114.565 126.270 1.00 46.24 C
ATOM 18 C6 A B1191 60.857 114.736 126.685 1.00 46.87 C
ATOM 19 N6 A B1191 61.861 113.949 126.293 1.00 49.39 N
ATOM 20 N1 A B1191 61.124 115.752 127.531 1.00 46.54 N
ATOM 21 C2 A B1191 60.117 116.531 127.932 1.00 45.42 C
ATOM 22 N3 A B1191 58.831 116.467 127.618 1.00 45.56 N
ATOM 23 C4 A B1191 58.601 115.450 126.771 1.00 45.97 C
ATOM 24 P A B1192 51.858 117.202 125.931 1.00 45.68 P
ATOM 25 OP1 A B1192 51.200 117.246 127.260 1.00 46.14 O
ATOM 26 OP2 A B1192 51.343 116.277 124.886 1.00 45.61 O
ATOM 27 O5' A B1192 51.857 118.679 125.353 1.00 45.12 O
TER
ATOM 2 P A A1192 51.858 117.202 125.931 1.00 45.68 P
ATOM 3 OP1 A A1192 51.200 117.246 127.260 1.00 46.14 O
ATOM 4 OP2 A A1192 51.343 116.277 124.886 1.00 45.61 O
ATOM 5 O5' A A1192 51.857 118.679 125.353 1.00 45.12 O
ATOM 6 C5' A A1192 52.392 118.965 124.055 1.00 43.77 C
ATOM 7 C4' A A1192 53.622 119.820 124.191 1.00 42.14 C
ATOM 8 O4' A A1192 54.764 118.977 124.465 1.00 40.25 O
ATOM 9 C3' A A1192 54.053 120.546 122.933 1.00 40.60 C
ATOM 10 O3' A A1192 53.276 121.729 122.797 1.00 40.07 O
ATOM 11 C2' A A1192 55.507 120.884 123.245 1.00 40.04 C
ATOM 12 O2' A A1192 55.641 122.064 124.007 1.00 39.90 O
ATOM 13 C1' A A1192 55.933 119.681 124.097 1.00 40.25 C
ATOM 14 N9 A A1192 56.853 118.759 123.436 1.00 40.48 N
ATOM 15 C8 A A1192 56.690 118.082 122.254 1.00 41.31 C
ATOM 16 N7 A A1192 57.719 117.342 121.923 1.00 40.58 N
ATOM 17 C5 A A1192 58.615 117.539 122.960 1.00 39.37 C
ATOM 18 C6 A A1192 59.893 117.036 123.200 1.00 38.63 C
ATOM 19 N6 A A1192 60.521 116.197 122.380 1.00 38.14 N
ATOM 20 N1 A A1192 60.520 117.433 124.324 1.00 39.00 N
ATOM 21 C2 A A1192 59.893 118.286 125.141 1.00 40.19 C
ATOM 22 N3 A A1192 58.690 118.831 125.024 1.00 39.19 N
ATOM 23 C4 A A1192 58.095 118.409 123.899 1.00 39.74 C
ATOM 24 P U A1193 52.967 122.321 121.345 1.00 40.19 P
ATOM 25 OP1 U A1193 52.234 121.292 120.564 1.00 40.39 O
ATOM 26 OP2 U A1193 54.235 122.889 120.824 1.00 38.82 O
ATOM 27 O5' U A1193 51.955 123.511 121.633 1.00 40.36 O
TER
ATOM 1 O3' A B1190 53.603 112.649 131.189 1.00 42.64 O
ATOM 2 P A B1191 52.848 112.768 129.774 1.00 42.17 P
ATOM 3 OP1 A B1191 51.601 113.534 130.009 1.00 41.54 O
ATOM 4 OP2 A B1191 52.773 111.423 129.162 1.00 42.57 O
ATOM 5 O5' A B1191 53.811 113.691 128.903 1.00 41.47 O
ATOM 6 C5' A B1191 54.006 115.062 129.272 1.00 42.26 C
ATOM 7 C4' A B1191 54.455 115.888 128.090 1.00 42.83 C
ATOM 8 O4' A B1191 55.869 115.698 127.864 1.00 42.07 O
ATOM 9 C3' A B1191 53.774 115.645 126.746 1.00 43.50 C
ATOM 10 O3' A B1191 53.408 116.887 126.179 1.00 44.16 O
ATOM 11 C2' A B1191 54.886 115.038 125.897 1.00 43.88 C
ATOM 12 O2' A B1191 54.757 115.390 124.537 1.00 44.76 O
ATOM 13 C1' A B1191 56.111 115.727 126.482 1.00 44.36 C
ATOM 14 N9 A B1191 57.395 115.072 126.229 1.00 46.02 N
ATOM 15 C8 A B1191 57.668 113.985 125.433 1.00 47.17 C
ATOM 16 N7 A B1191 58.933 113.643 125.426 1.00 48.39 N
ATOM 17 C5 A B1191 59.533 114.565 126.270 1.00 46.24 C
ATOM 18 C6 A B1191 60.857 114.736 126.685 1.00 46.87 C
ATOM 19 N6 A B1191 61.861 113.949 126.293 1.00 49.39 N
ATOM 20 N1 A B1191 61.124 115.752 127.531 1.00 46.54 N
ATOM 21 C2 A B1191 60.117 116.531 127.932 1.00 45.42 C
ATOM 22 N3 A B1191 58.831 116.467 127.618 1.00 45.56 N
ATOM 23 C4 A B1191 58.601 115.450 126.771 1.00 45.97 C
ATOM 24 P A B1192 51.858 117.202 125.931 1.00 45.68 P
ATOM 25 OP1 A B1192 51.200 117.246 127.260 1.00 46.14 O
ATOM 26 OP2 A B1192 51.343 116.277 124.886 1.00 45.61 O
ATOM 27 O5' A B1192 51.857 118.679 125.353 1.00 45.12 O
TER
Atoms:
OP1: (51.200,117.246,127.260)
OP2: (51.343,116.277,124.886)
C3': (54.053,120.546,122.933)
C1': (55.933,119.681,124.097)
C5': (52.392,118.965,124.055)
O4': (54.764,118.977,124.465)
C8: (56.690,118.082,122.254)
O2': (55.641,122.064,124.007)
C6: (59.893,117.036,123.200)
C5: (58.615,117.539,122.960)
C4: (58.095,118.409,123.899)
P: (51.858,117.202,125.931)
C4': (53.622,119.820,124.191)
C2': (55.507,120.884,123.245)
C2: (59.893,118.286,125.141)
N1: (60.520,117.433,124.324)
N3: (58.690,118.831,125.024)
N6: (60.521,116.197,122.380)
N7: (57.719,117.342,121.923)
N9: (56.853,118.759,123.436)
O5': (51.857,118.679,125.353)
O3': (53.276,121.729,122.797)
OP2: (51.343,116.277,124.886)
C3': (54.053,120.546,122.933)
C1': (55.933,119.681,124.097)
C5': (52.392,118.965,124.055)
O4': (54.764,118.977,124.465)
C8: (56.690,118.082,122.254)
O2': (55.641,122.064,124.007)
C6: (59.893,117.036,123.200)
C5: (58.615,117.539,122.960)
C4: (58.095,118.409,123.899)
P: (51.858,117.202,125.931)
C4': (53.622,119.820,124.191)
C2': (55.507,120.884,123.245)
C2: (59.893,118.286,125.141)
N1: (60.520,117.433,124.324)
N3: (58.690,118.831,125.024)
N6: (60.521,116.197,122.380)
N7: (57.719,117.342,121.923)
N9: (56.853,118.759,123.436)
O5': (51.857,118.679,125.353)
O3': (53.276,121.729,122.797)
OP1: (51.601,113.534,130.009)
OP2: (52.773,111.423,129.162)
C3': (53.774,115.645,126.746)
C1': (56.111,115.727,126.482)
C5': (54.006,115.062,129.272)
O4': (55.869,115.698,127.864)
C8: (57.668,113.985,125.433)
O2': (54.757,115.390,124.537)
C6: (60.857,114.736,126.685)
C5: (59.533,114.565,126.270)
C4: (58.601,115.450,126.771)
P: (52.848,112.768,129.774)
C4': (54.455,115.888,128.090)
C2': (54.886,115.038,125.897)
C2: (60.117,116.531,127.932)
N1: (61.124,115.752,127.531)
N3: (58.831,116.467,127.618)
N6: (61.861,113.949,126.293)
N7: (58.933,113.643,125.426)
N9: (57.395,115.072,126.229)
O5': (53.811,113.691,128.903)
O3': (53.408,116.887,126.179)
OP2: (52.773,111.423,129.162)
C3': (53.774,115.645,126.746)
C1': (56.111,115.727,126.482)
C5': (54.006,115.062,129.272)
O4': (55.869,115.698,127.864)
C8: (57.668,113.985,125.433)
O2': (54.757,115.390,124.537)
C6: (60.857,114.736,126.685)
C5: (59.533,114.565,126.270)
C4: (58.601,115.450,126.771)
P: (52.848,112.768,129.774)
C4': (54.455,115.888,128.090)
C2': (54.886,115.038,125.897)
C2: (60.117,116.531,127.932)
N1: (61.124,115.752,127.531)
N3: (58.831,116.467,127.618)
N6: (61.861,113.949,126.293)
N7: (58.933,113.643,125.426)
N9: (57.395,115.072,126.229)
O5': (53.811,113.691,128.903)
O3': (53.408,116.887,126.179)
Image (generated by PyMOL):