Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1341:A1340
Extra
PDB:
ATOM 1 O3' A A1340 -39.546 -86.367 13.643 1.00 61.75 O
ATOM 2 P A A1341 -40.037 -85.151 12.716 1.00 50.74 P
ATOM 3 OP1 A A1341 -41.321 -85.546 12.101 1.00 66.77 O
ATOM 4 OP2 A A1341 -38.929 -84.751 11.820 1.00 44.12 O
ATOM 5 O5' A A1341 -40.307 -83.990 13.790 1.00 47.46 O
ATOM 6 C5' A A1341 -41.465 -84.027 14.623 1.00 45.36 C
ATOM 7 C4' A A1341 -41.394 -82.924 15.654 1.00 43.12 C
ATOM 8 O4' A A1341 -40.154 -83.084 16.381 1.00 50.46 O
ATOM 9 C3' A A1341 -41.280 -81.526 15.067 1.00 41.54 C
ATOM 10 O3' A A1341 -42.559 -81.007 14.724 1.00 42.25 O
ATOM 11 C2' A A1341 -40.664 -80.790 16.247 1.00 43.04 C
ATOM 12 O2' A A1341 -41.585 -80.572 17.288 1.00 49.81 O
ATOM 13 C1' A A1341 -39.624 -81.808 16.704 1.00 50.42 C
ATOM 14 N9 A A1341 -38.354 -81.552 16.029 1.00 53.40 N
ATOM 15 C8 A A1341 -37.898 -82.105 14.861 1.00 58.02 C
ATOM 16 N7 A A1341 -36.722 -81.654 14.482 1.00 61.38 N
ATOM 17 C5 A A1341 -36.397 -80.738 15.474 1.00 51.87 C
ATOM 18 C6 A A1341 -35.276 -79.909 15.659 1.00 51.07 C
ATOM 19 N6 A A1341 -34.232 -79.879 14.821 1.00 63.95 N
ATOM 20 N1 A A1341 -35.268 -79.114 16.746 1.00 42.44 N
ATOM 21 C2 A A1341 -36.304 -79.149 17.590 1.00 43.70 C
ATOM 22 N3 A A1341 -37.407 -79.877 17.517 1.00 45.83 N
ATOM 23 C4 A A1341 -37.391 -80.656 16.428 1.00 47.95 C
ATOM 24 P U A1342 -42.751 -79.979 13.511 1.00 52.61 P
ATOM 25 OP1 U A1342 -44.177 -79.603 13.522 1.00 52.04 O
ATOM 26 OP2 U A1342 -42.122 -80.507 12.274 1.00 42.99 O
ATOM 27 O5' U A1342 -41.886 -78.728 13.989 1.00 47.94 O
TER
ATOM 1 O3' C B1339 -33.712 -86.497 12.498 1.00 49.95 O
ATOM 2 P A B1340 -34.594 -87.834 12.455 1.00 47.20 P
ATOM 3 OP1 A B1340 -33.997 -88.890 13.306 1.00 68.31 O
ATOM 4 OP2 A B1340 -34.965 -88.098 11.037 1.00 43.30 O
ATOM 5 O5' A B1340 -35.899 -87.306 13.199 1.00 59.08 O
ATOM 6 C5' A B1340 -36.945 -88.196 13.502 1.00 64.27 C
ATOM 7 C4' A B1340 -37.756 -87.614 14.637 1.00 64.43 C
ATOM 8 O4' A B1340 -36.869 -87.382 15.755 1.00 59.71 O
ATOM 9 C3' A B1340 -38.342 -86.245 14.364 1.00 60.79 C
ATOM 10 O3' A B1340 -39.546 -86.367 13.643 1.00 61.75 O
ATOM 11 C2' A B1340 -38.617 -85.785 15.786 1.00 67.30 C
ATOM 12 O2' A B1340 -39.795 -86.375 16.310 1.00 69.54 O
ATOM 13 C1' A B1340 -37.368 -86.294 16.509 1.00 60.79 C
ATOM 14 N9 A B1340 -36.314 -85.291 16.616 1.00 52.04 N
ATOM 15 C8 A B1340 -35.176 -85.212 15.868 1.00 60.51 C
ATOM 16 N7 A B1340 -34.407 -84.197 16.183 1.00 58.20 N
ATOM 17 C5 A B1340 -35.091 -83.576 17.205 1.00 50.83 C
ATOM 18 C6 A B1340 -34.802 -82.439 17.968 1.00 54.56 C
ATOM 19 N6 A B1340 -33.692 -81.712 17.790 1.00 69.35 N
ATOM 20 N1 A B1340 -35.692 -82.075 18.912 1.00 51.74 N
ATOM 21 C2 A B1340 -36.793 -82.810 19.069 1.00 57.35 C
ATOM 22 N3 A B1340 -37.173 -83.900 18.412 1.00 64.70 N
ATOM 23 C4 A B1340 -36.266 -84.231 17.486 1.00 56.45 C
ATOM 24 P A B1341 -40.037 -85.151 12.716 1.00 50.74 P
ATOM 25 OP1 A B1341 -41.321 -85.546 12.101 1.00 66.77 O
ATOM 26 OP2 A B1341 -38.929 -84.751 11.820 1.00 44.12 O
ATOM 27 O5' A B1341 -40.307 -83.990 13.790 1.00 47.46 O
TER
ATOM 2 P A A1341 -40.037 -85.151 12.716 1.00 50.74 P
ATOM 3 OP1 A A1341 -41.321 -85.546 12.101 1.00 66.77 O
ATOM 4 OP2 A A1341 -38.929 -84.751 11.820 1.00 44.12 O
ATOM 5 O5' A A1341 -40.307 -83.990 13.790 1.00 47.46 O
ATOM 6 C5' A A1341 -41.465 -84.027 14.623 1.00 45.36 C
ATOM 7 C4' A A1341 -41.394 -82.924 15.654 1.00 43.12 C
ATOM 8 O4' A A1341 -40.154 -83.084 16.381 1.00 50.46 O
ATOM 9 C3' A A1341 -41.280 -81.526 15.067 1.00 41.54 C
ATOM 10 O3' A A1341 -42.559 -81.007 14.724 1.00 42.25 O
ATOM 11 C2' A A1341 -40.664 -80.790 16.247 1.00 43.04 C
ATOM 12 O2' A A1341 -41.585 -80.572 17.288 1.00 49.81 O
ATOM 13 C1' A A1341 -39.624 -81.808 16.704 1.00 50.42 C
ATOM 14 N9 A A1341 -38.354 -81.552 16.029 1.00 53.40 N
ATOM 15 C8 A A1341 -37.898 -82.105 14.861 1.00 58.02 C
ATOM 16 N7 A A1341 -36.722 -81.654 14.482 1.00 61.38 N
ATOM 17 C5 A A1341 -36.397 -80.738 15.474 1.00 51.87 C
ATOM 18 C6 A A1341 -35.276 -79.909 15.659 1.00 51.07 C
ATOM 19 N6 A A1341 -34.232 -79.879 14.821 1.00 63.95 N
ATOM 20 N1 A A1341 -35.268 -79.114 16.746 1.00 42.44 N
ATOM 21 C2 A A1341 -36.304 -79.149 17.590 1.00 43.70 C
ATOM 22 N3 A A1341 -37.407 -79.877 17.517 1.00 45.83 N
ATOM 23 C4 A A1341 -37.391 -80.656 16.428 1.00 47.95 C
ATOM 24 P U A1342 -42.751 -79.979 13.511 1.00 52.61 P
ATOM 25 OP1 U A1342 -44.177 -79.603 13.522 1.00 52.04 O
ATOM 26 OP2 U A1342 -42.122 -80.507 12.274 1.00 42.99 O
ATOM 27 O5' U A1342 -41.886 -78.728 13.989 1.00 47.94 O
TER
ATOM 1 O3' C B1339 -33.712 -86.497 12.498 1.00 49.95 O
ATOM 2 P A B1340 -34.594 -87.834 12.455 1.00 47.20 P
ATOM 3 OP1 A B1340 -33.997 -88.890 13.306 1.00 68.31 O
ATOM 4 OP2 A B1340 -34.965 -88.098 11.037 1.00 43.30 O
ATOM 5 O5' A B1340 -35.899 -87.306 13.199 1.00 59.08 O
ATOM 6 C5' A B1340 -36.945 -88.196 13.502 1.00 64.27 C
ATOM 7 C4' A B1340 -37.756 -87.614 14.637 1.00 64.43 C
ATOM 8 O4' A B1340 -36.869 -87.382 15.755 1.00 59.71 O
ATOM 9 C3' A B1340 -38.342 -86.245 14.364 1.00 60.79 C
ATOM 10 O3' A B1340 -39.546 -86.367 13.643 1.00 61.75 O
ATOM 11 C2' A B1340 -38.617 -85.785 15.786 1.00 67.30 C
ATOM 12 O2' A B1340 -39.795 -86.375 16.310 1.00 69.54 O
ATOM 13 C1' A B1340 -37.368 -86.294 16.509 1.00 60.79 C
ATOM 14 N9 A B1340 -36.314 -85.291 16.616 1.00 52.04 N
ATOM 15 C8 A B1340 -35.176 -85.212 15.868 1.00 60.51 C
ATOM 16 N7 A B1340 -34.407 -84.197 16.183 1.00 58.20 N
ATOM 17 C5 A B1340 -35.091 -83.576 17.205 1.00 50.83 C
ATOM 18 C6 A B1340 -34.802 -82.439 17.968 1.00 54.56 C
ATOM 19 N6 A B1340 -33.692 -81.712 17.790 1.00 69.35 N
ATOM 20 N1 A B1340 -35.692 -82.075 18.912 1.00 51.74 N
ATOM 21 C2 A B1340 -36.793 -82.810 19.069 1.00 57.35 C
ATOM 22 N3 A B1340 -37.173 -83.900 18.412 1.00 64.70 N
ATOM 23 C4 A B1340 -36.266 -84.231 17.486 1.00 56.45 C
ATOM 24 P A B1341 -40.037 -85.151 12.716 1.00 50.74 P
ATOM 25 OP1 A B1341 -41.321 -85.546 12.101 1.00 66.77 O
ATOM 26 OP2 A B1341 -38.929 -84.751 11.820 1.00 44.12 O
ATOM 27 O5' A B1341 -40.307 -83.990 13.790 1.00 47.46 O
TER
Atoms:
OP1: (-41.321,-85.546,12.101)
OP2: (-38.929,-84.751,11.820)
C3': (-41.280,-81.526,15.067)
C1': (-39.624,-81.808,16.704)
C5': (-41.465,-84.027,14.623)
O4': (-40.154,-83.084,16.381)
C8: (-37.898,-82.105,14.861)
O2': (-41.585,-80.572,17.288)
C6: (-35.276,-79.909,15.659)
C5: (-36.397,-80.738,15.474)
C4: (-37.391,-80.656,16.428)
P: (-40.037,-85.151,12.716)
C4': (-41.394,-82.924,15.654)
C2': (-40.664,-80.790,16.247)
C2: (-36.304,-79.149,17.590)
N1: (-35.268,-79.114,16.746)
N3: (-37.407,-79.877,17.517)
N6: (-34.232,-79.879,14.821)
N7: (-36.722,-81.654,14.482)
N9: (-38.354,-81.552,16.029)
O5': (-40.307,-83.990,13.790)
O3': (-42.559,-81.007,14.724)
OP2: (-38.929,-84.751,11.820)
C3': (-41.280,-81.526,15.067)
C1': (-39.624,-81.808,16.704)
C5': (-41.465,-84.027,14.623)
O4': (-40.154,-83.084,16.381)
C8: (-37.898,-82.105,14.861)
O2': (-41.585,-80.572,17.288)
C6: (-35.276,-79.909,15.659)
C5: (-36.397,-80.738,15.474)
C4: (-37.391,-80.656,16.428)
P: (-40.037,-85.151,12.716)
C4': (-41.394,-82.924,15.654)
C2': (-40.664,-80.790,16.247)
C2: (-36.304,-79.149,17.590)
N1: (-35.268,-79.114,16.746)
N3: (-37.407,-79.877,17.517)
N6: (-34.232,-79.879,14.821)
N7: (-36.722,-81.654,14.482)
N9: (-38.354,-81.552,16.029)
O5': (-40.307,-83.990,13.790)
O3': (-42.559,-81.007,14.724)
OP1: (-33.997,-88.890,13.306)
OP2: (-34.965,-88.098,11.037)
C3': (-38.342,-86.245,14.364)
C1': (-37.368,-86.294,16.509)
C5': (-36.945,-88.196,13.502)
O4': (-36.869,-87.382,15.755)
C8: (-35.176,-85.212,15.868)
O2': (-39.795,-86.375,16.310)
C6: (-34.802,-82.439,17.968)
C5: (-35.091,-83.576,17.205)
C4: (-36.266,-84.231,17.486)
P: (-34.594,-87.834,12.455)
C4': (-37.756,-87.614,14.637)
C2': (-38.617,-85.785,15.786)
C2: (-36.793,-82.810,19.069)
N1: (-35.692,-82.075,18.912)
N3: (-37.173,-83.900,18.412)
N6: (-33.692,-81.712,17.790)
N7: (-34.407,-84.197,16.183)
N9: (-36.314,-85.291,16.616)
O5': (-35.899,-87.306,13.199)
O3': (-39.546,-86.367,13.643)
OP2: (-34.965,-88.098,11.037)
C3': (-38.342,-86.245,14.364)
C1': (-37.368,-86.294,16.509)
C5': (-36.945,-88.196,13.502)
O4': (-36.869,-87.382,15.755)
C8: (-35.176,-85.212,15.868)
O2': (-39.795,-86.375,16.310)
C6: (-34.802,-82.439,17.968)
C5: (-35.091,-83.576,17.205)
C4: (-36.266,-84.231,17.486)
P: (-34.594,-87.834,12.455)
C4': (-37.756,-87.614,14.637)
C2': (-38.617,-85.785,15.786)
C2: (-36.793,-82.810,19.069)
N1: (-35.692,-82.075,18.912)
N3: (-37.173,-83.900,18.412)
N6: (-33.692,-81.712,17.790)
N7: (-34.407,-84.197,16.183)
N9: (-36.314,-85.291,16.616)
O5': (-35.899,-87.306,13.199)
O3': (-39.546,-86.367,13.643)
Image (generated by PyMOL):