Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B53:B52
Extra
PDB:
ATOM 1 O3' A A 52 -24.738 -17.210 5.113 1.00 52.20 O
ATOM 2 P A A 53 -25.440 -15.977 5.861 1.00 54.17 P
ATOM 3 OP1 A A 53 -26.621 -15.603 5.043 1.00 52.97 O
ATOM 4 OP2 A A 53 -24.368 -14.975 6.087 1.00 51.92 O
ATOM 5 O5' A A 53 -25.908 -16.617 7.244 1.00 51.81 O
ATOM 6 C5' A A 53 -25.414 -16.075 8.468 1.00 49.76 C
ATOM 7 C4' A A 53 -24.386 -16.981 9.094 1.00 49.16 C
ATOM 8 O4' A A 53 -23.322 -17.244 8.150 1.00 50.08 O
ATOM 9 C3' A A 53 -23.679 -16.410 10.311 1.00 47.53 C
ATOM 10 O3' A A 53 -24.433 -16.559 11.496 1.00 45.65 O
ATOM 11 C2' A A 53 -22.359 -17.176 10.317 1.00 46.84 C
ATOM 12 O2' A A 53 -22.560 -18.484 10.833 1.00 46.07 O
ATOM 13 C1' A A 53 -22.081 -17.294 8.819 1.00 48.41 C
ATOM 14 N9 A A 53 -21.271 -16.174 8.311 1.00 48.10 N
ATOM 15 C8 A A 53 -21.609 -15.318 7.294 1.00 49.19 C
ATOM 16 N7 A A 53 -20.700 -14.409 7.043 1.00 49.06 N
ATOM 17 C5 A A 53 -19.696 -14.691 7.958 1.00 48.32 C
ATOM 18 C6 A A 53 -18.455 -14.084 8.200 1.00 47.20 C
ATOM 19 N6 A A 53 -18.012 -13.030 7.511 1.00 47.51 N
ATOM 20 N1 A A 53 -17.685 -14.601 9.183 1.00 46.01 N
ATOM 21 C2 A A 53 -18.143 -15.658 9.867 1.00 45.80 C
ATOM 22 N3 A A 53 -19.293 -16.318 9.731 1.00 46.75 N
ATOM 23 C4 A A 53 -20.032 -15.777 8.747 1.00 48.14 C
ATOM 24 P U A 54 -25.652 -15.563 11.818 1.00 48.50 P
ATOM 25 OP1 U A 54 -26.824 -16.054 11.047 1.00 46.09 O
ATOM 26 OP2 U A 54 -25.165 -14.173 11.615 1.00 46.51 O
ATOM 27 O5' U A 54 -25.869 -15.865 13.362 1.00 42.70 O
TER
ATOM 1 O3' A B 51 -22.292 -17.827 -0.669 1.00 55.46 O
ATOM 2 P A B 52 -23.087 -16.453 -0.417 1.00 56.72 P
ATOM 3 OP1 A B 52 -24.025 -16.331 -1.561 1.00 56.74 O
ATOM 4 OP2 A B 52 -22.162 -15.327 -0.140 1.00 53.68 O
ATOM 5 O5' A B 52 -23.881 -16.882 0.896 1.00 57.77 O
ATOM 6 C5' A B 52 -23.653 -16.354 2.206 1.00 55.41 C
ATOM 7 C4' A B 52 -23.316 -17.465 3.172 1.00 53.60 C
ATOM 8 O4' A B 52 -21.937 -17.884 2.991 1.00 53.27 O
ATOM 9 C3' A B 52 -23.406 -17.118 4.649 1.00 52.02 C
ATOM 10 O3' A B 52 -24.738 -17.210 5.113 1.00 52.20 O
ATOM 11 C2' A B 52 -22.481 -18.147 5.291 1.00 52.67 C
ATOM 12 O2' A B 52 -23.147 -19.400 5.400 1.00 53.28 O
ATOM 13 C1' A B 52 -21.384 -18.274 4.235 1.00 52.30 C
ATOM 14 N9 A B 52 -20.176 -17.470 4.538 1.00 51.31 N
ATOM 15 C8 A B 52 -19.702 -16.355 3.889 1.00 51.59 C
ATOM 16 N7 A B 52 -18.590 -15.879 4.401 1.00 50.68 N
ATOM 17 C5 A B 52 -18.309 -16.740 5.454 1.00 49.68 C
ATOM 18 C6 A B 52 -17.264 -16.781 6.395 1.00 48.01 C
ATOM 19 N6 A B 52 -16.263 -15.899 6.430 1.00 47.69 N
ATOM 20 N1 A B 52 -17.281 -17.771 7.312 1.00 46.62 N
ATOM 21 C2 A B 52 -18.285 -18.655 7.278 1.00 47.43 C
ATOM 22 N3 A B 52 -19.322 -18.723 6.447 1.00 48.63 N
ATOM 23 C4 A B 52 -19.275 -17.726 5.546 1.00 49.89 C
ATOM 24 P A B 53 -25.440 -15.977 5.861 1.00 54.17 P
ATOM 25 OP1 A B 53 -26.621 -15.603 5.043 1.00 52.97 O
ATOM 26 OP2 A B 53 -24.368 -14.975 6.087 1.00 51.92 O
ATOM 27 O5' A B 53 -25.908 -16.617 7.244 1.00 51.81 O
TER
ATOM 2 P A A 53 -25.440 -15.977 5.861 1.00 54.17 P
ATOM 3 OP1 A A 53 -26.621 -15.603 5.043 1.00 52.97 O
ATOM 4 OP2 A A 53 -24.368 -14.975 6.087 1.00 51.92 O
ATOM 5 O5' A A 53 -25.908 -16.617 7.244 1.00 51.81 O
ATOM 6 C5' A A 53 -25.414 -16.075 8.468 1.00 49.76 C
ATOM 7 C4' A A 53 -24.386 -16.981 9.094 1.00 49.16 C
ATOM 8 O4' A A 53 -23.322 -17.244 8.150 1.00 50.08 O
ATOM 9 C3' A A 53 -23.679 -16.410 10.311 1.00 47.53 C
ATOM 10 O3' A A 53 -24.433 -16.559 11.496 1.00 45.65 O
ATOM 11 C2' A A 53 -22.359 -17.176 10.317 1.00 46.84 C
ATOM 12 O2' A A 53 -22.560 -18.484 10.833 1.00 46.07 O
ATOM 13 C1' A A 53 -22.081 -17.294 8.819 1.00 48.41 C
ATOM 14 N9 A A 53 -21.271 -16.174 8.311 1.00 48.10 N
ATOM 15 C8 A A 53 -21.609 -15.318 7.294 1.00 49.19 C
ATOM 16 N7 A A 53 -20.700 -14.409 7.043 1.00 49.06 N
ATOM 17 C5 A A 53 -19.696 -14.691 7.958 1.00 48.32 C
ATOM 18 C6 A A 53 -18.455 -14.084 8.200 1.00 47.20 C
ATOM 19 N6 A A 53 -18.012 -13.030 7.511 1.00 47.51 N
ATOM 20 N1 A A 53 -17.685 -14.601 9.183 1.00 46.01 N
ATOM 21 C2 A A 53 -18.143 -15.658 9.867 1.00 45.80 C
ATOM 22 N3 A A 53 -19.293 -16.318 9.731 1.00 46.75 N
ATOM 23 C4 A A 53 -20.032 -15.777 8.747 1.00 48.14 C
ATOM 24 P U A 54 -25.652 -15.563 11.818 1.00 48.50 P
ATOM 25 OP1 U A 54 -26.824 -16.054 11.047 1.00 46.09 O
ATOM 26 OP2 U A 54 -25.165 -14.173 11.615 1.00 46.51 O
ATOM 27 O5' U A 54 -25.869 -15.865 13.362 1.00 42.70 O
TER
ATOM 1 O3' A B 51 -22.292 -17.827 -0.669 1.00 55.46 O
ATOM 2 P A B 52 -23.087 -16.453 -0.417 1.00 56.72 P
ATOM 3 OP1 A B 52 -24.025 -16.331 -1.561 1.00 56.74 O
ATOM 4 OP2 A B 52 -22.162 -15.327 -0.140 1.00 53.68 O
ATOM 5 O5' A B 52 -23.881 -16.882 0.896 1.00 57.77 O
ATOM 6 C5' A B 52 -23.653 -16.354 2.206 1.00 55.41 C
ATOM 7 C4' A B 52 -23.316 -17.465 3.172 1.00 53.60 C
ATOM 8 O4' A B 52 -21.937 -17.884 2.991 1.00 53.27 O
ATOM 9 C3' A B 52 -23.406 -17.118 4.649 1.00 52.02 C
ATOM 10 O3' A B 52 -24.738 -17.210 5.113 1.00 52.20 O
ATOM 11 C2' A B 52 -22.481 -18.147 5.291 1.00 52.67 C
ATOM 12 O2' A B 52 -23.147 -19.400 5.400 1.00 53.28 O
ATOM 13 C1' A B 52 -21.384 -18.274 4.235 1.00 52.30 C
ATOM 14 N9 A B 52 -20.176 -17.470 4.538 1.00 51.31 N
ATOM 15 C8 A B 52 -19.702 -16.355 3.889 1.00 51.59 C
ATOM 16 N7 A B 52 -18.590 -15.879 4.401 1.00 50.68 N
ATOM 17 C5 A B 52 -18.309 -16.740 5.454 1.00 49.68 C
ATOM 18 C6 A B 52 -17.264 -16.781 6.395 1.00 48.01 C
ATOM 19 N6 A B 52 -16.263 -15.899 6.430 1.00 47.69 N
ATOM 20 N1 A B 52 -17.281 -17.771 7.312 1.00 46.62 N
ATOM 21 C2 A B 52 -18.285 -18.655 7.278 1.00 47.43 C
ATOM 22 N3 A B 52 -19.322 -18.723 6.447 1.00 48.63 N
ATOM 23 C4 A B 52 -19.275 -17.726 5.546 1.00 49.89 C
ATOM 24 P A B 53 -25.440 -15.977 5.861 1.00 54.17 P
ATOM 25 OP1 A B 53 -26.621 -15.603 5.043 1.00 52.97 O
ATOM 26 OP2 A B 53 -24.368 -14.975 6.087 1.00 51.92 O
ATOM 27 O5' A B 53 -25.908 -16.617 7.244 1.00 51.81 O
TER
Atoms:
OP1: (-26.621,-15.603,5.043)
OP2: (-24.368,-14.975,6.087)
C3': (-23.679,-16.410,10.311)
C1': (-22.081,-17.294,8.819)
C5': (-25.414,-16.075,8.468)
O4': (-23.322,-17.244,8.150)
C8: (-21.609,-15.318,7.294)
O2': (-22.560,-18.484,10.833)
C6: (-18.455,-14.084,8.200)
C5: (-19.696,-14.691,7.958)
C4: (-20.032,-15.777,8.747)
P: (-25.440,-15.977,5.861)
C4': (-24.386,-16.981,9.094)
C2': (-22.359,-17.176,10.317)
C2: (-18.143,-15.658,9.867)
N1: (-17.685,-14.601,9.183)
N3: (-19.293,-16.318,9.731)
N6: (-18.012,-13.030,7.511)
N7: (-20.700,-14.409,7.043)
N9: (-21.271,-16.174,8.311)
O5': (-25.908,-16.617,7.244)
O3': (-24.433,-16.559,11.496)
OP2: (-24.368,-14.975,6.087)
C3': (-23.679,-16.410,10.311)
C1': (-22.081,-17.294,8.819)
C5': (-25.414,-16.075,8.468)
O4': (-23.322,-17.244,8.150)
C8: (-21.609,-15.318,7.294)
O2': (-22.560,-18.484,10.833)
C6: (-18.455,-14.084,8.200)
C5: (-19.696,-14.691,7.958)
C4: (-20.032,-15.777,8.747)
P: (-25.440,-15.977,5.861)
C4': (-24.386,-16.981,9.094)
C2': (-22.359,-17.176,10.317)
C2: (-18.143,-15.658,9.867)
N1: (-17.685,-14.601,9.183)
N3: (-19.293,-16.318,9.731)
N6: (-18.012,-13.030,7.511)
N7: (-20.700,-14.409,7.043)
N9: (-21.271,-16.174,8.311)
O5': (-25.908,-16.617,7.244)
O3': (-24.433,-16.559,11.496)
OP1: (-24.025,-16.331,-1.561)
OP2: (-22.162,-15.327,-0.140)
C3': (-23.406,-17.118,4.649)
C1': (-21.384,-18.274,4.235)
C5': (-23.653,-16.354,2.206)
O4': (-21.937,-17.884,2.991)
C8: (-19.702,-16.355,3.889)
O2': (-23.147,-19.400,5.400)
C6: (-17.264,-16.781,6.395)
C5: (-18.309,-16.740,5.454)
C4: (-19.275,-17.726,5.546)
P: (-23.087,-16.453,-0.417)
C4': (-23.316,-17.465,3.172)
C2': (-22.481,-18.147,5.291)
C2: (-18.285,-18.655,7.278)
N1: (-17.281,-17.771,7.312)
N3: (-19.322,-18.723,6.447)
N6: (-16.263,-15.899,6.430)
N7: (-18.590,-15.879,4.401)
N9: (-20.176,-17.470,4.538)
O5': (-23.881,-16.882,0.896)
O3': (-24.738,-17.210,5.113)
OP2: (-22.162,-15.327,-0.140)
C3': (-23.406,-17.118,4.649)
C1': (-21.384,-18.274,4.235)
C5': (-23.653,-16.354,2.206)
O4': (-21.937,-17.884,2.991)
C8: (-19.702,-16.355,3.889)
O2': (-23.147,-19.400,5.400)
C6: (-17.264,-16.781,6.395)
C5: (-18.309,-16.740,5.454)
C4: (-19.275,-17.726,5.546)
P: (-23.087,-16.453,-0.417)
C4': (-23.316,-17.465,3.172)
C2': (-22.481,-18.147,5.291)
C2: (-18.285,-18.655,7.278)
N1: (-17.281,-17.771,7.312)
N3: (-19.322,-18.723,6.447)
N6: (-16.263,-15.899,6.430)
N7: (-18.590,-15.879,4.401)
N9: (-20.176,-17.470,4.538)
O5': (-23.881,-16.882,0.896)
O3': (-24.738,-17.210,5.113)
Image (generated by PyMOL):