ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1316:A1315

Extra

PDB:
ATOM 1 O3' A A1315 54.635 -39.284 -59.677 1.00 35.56 O
ATOM 2 P A A1316 53.462 -38.800 -58.691 1.00 34.37 P
ATOM 3 OP1 A A1316 52.180 -39.124 -59.375 1.00 31.36 O
ATOM 4 OP2 A A1316 53.767 -37.385 -58.332 1.00 34.72 O
ATOM 5 O5' A A1316 53.629 -39.722 -57.396 1.00 34.34 O
ATOM 6 C5' A A1316 53.428 -41.122 -57.466 1.00 38.73 C
ATOM 7 C4' A A1316 53.868 -41.807 -56.202 1.00 37.75 C
ATOM 8 O4' A A1316 55.264 -41.515 -55.960 1.00 35.82 O
ATOM 9 C3' A A1316 53.167 -41.361 -54.922 1.00 36.74 C
ATOM 10 O3' A A1316 51.922 -42.000 -54.716 1.00 43.63 O
ATOM 11 C2' A A1316 54.184 -41.704 -53.857 1.00 41.96 C
ATOM 12 O2' A A1316 54.159 -43.092 -53.578 1.00 49.50 O
ATOM 13 C1' A A1316 55.489 -41.380 -54.574 1.00 42.48 C
ATOM 14 N9 A A1316 55.923 -40.006 -54.291 1.00 39.29 N
ATOM 15 C8 A A1316 55.904 -38.905 -55.083 1.00 33.66 C
ATOM 16 N7 A A1316 56.375 -37.858 -54.456 1.00 40.26 N
ATOM 17 C5 A A1316 56.711 -38.299 -53.193 1.00 35.97 C
ATOM 18 C6 A A1316 57.253 -37.679 -52.076 1.00 37.19 C
ATOM 19 N6 A A1316 57.576 -36.392 -51.989 1.00 51.06 N
ATOM 20 N1 A A1316 57.462 -38.431 -51.008 1.00 38.83 N
ATOM 21 C2 A A1316 57.142 -39.708 -51.054 1.00 41.67 C
ATOM 22 N3 A A1316 56.618 -40.402 -52.030 1.00 40.74 N
ATOM 23 C4 A A1316 56.432 -39.621 -53.084 1.00 39.91 C
ATOM 24 P G A1317 50.605 -41.136 -54.384 1.00 42.83 P
ATOM 25 OP1 G A1317 49.783 -41.940 -53.447 1.00 34.72 O
ATOM 26 OP2 G A1317 50.013 -40.734 -55.677 1.00 55.05 O
ATOM 27 O5' G A1317 51.179 -39.856 -53.656 1.00 30.00 O
TER

ATOM 1 O3' A B1314 59.117 -35.168 -60.437 1.00 35.12 O
ATOM 2 P A B1315 57.715 -35.039 -59.653 1.00 41.07 P
ATOM 3 OP1 A B1315 56.829 -34.224 -60.516 1.00 51.31 O
ATOM 4 OP2 A B1315 58.008 -34.541 -58.270 1.00 38.79 O
ATOM 5 O5' A B1315 57.203 -36.562 -59.571 1.00 28.93 O
ATOM 6 C5' A B1315 57.043 -37.358 -60.740 1.00 28.07 C
ATOM 7 C4' A B1315 56.930 -38.833 -60.410 1.00 28.80 C
ATOM 8 O4' A B1315 58.219 -39.342 -59.960 1.00 37.16 O
ATOM 9 C3' A B1315 55.985 -39.197 -59.274 1.00 35.98 C
ATOM 10 O3' A B1315 54.635 -39.284 -59.677 1.00 35.56 O
ATOM 11 C2' A B1315 56.550 -40.524 -58.797 1.00 33.88 C
ATOM 12 O2' A B1315 56.242 -41.545 -59.722 1.00 35.63 O
ATOM 13 C1' A B1315 58.035 -40.251 -58.886 1.00 34.58 C
ATOM 14 N9 A B1315 58.532 -39.629 -57.645 1.00 33.92 N
ATOM 15 C8 A B1315 58.789 -38.293 -57.442 1.00 33.69 C
ATOM 16 N7 A B1315 59.190 -38.027 -56.225 1.00 40.71 N
ATOM 17 C5 A B1315 59.203 -39.267 -55.582 1.00 37.58 C
ATOM 18 C6 A B1315 59.543 -39.648 -54.268 1.00 35.65 C
ATOM 19 N6 A B1315 59.952 -38.796 -53.337 1.00 34.41 N
ATOM 20 N1 A B1315 59.435 -40.954 -53.936 1.00 42.21 N
ATOM 21 C2 A B1315 59.011 -41.810 -54.888 1.00 35.29 C
ATOM 22 N3 A B1315 58.664 -41.573 -56.158 1.00 32.12 N
ATOM 23 C4 A B1315 58.783 -40.265 -56.448 1.00 33.88 C
ATOM 24 P A B1316 53.462 -38.800 -58.691 1.00 34.37 P
ATOM 25 OP1 A B1316 52.180 -39.124 -59.375 1.00 31.36 O
ATOM 26 OP2 A B1316 53.767 -37.385 -58.332 1.00 34.72 O
ATOM 27 O5' A B1316 53.629 -39.722 -57.396 1.00 34.34 O
TER

Atoms:
OP1: (52.180,-39.124,-59.375)
OP2: (53.767,-37.385,-58.332)
C3': (53.167,-41.361,-54.922)
C1': (55.489,-41.380,-54.574)
C5': (53.428,-41.122,-57.466)
O4': (55.264,-41.515,-55.960)
C8: (55.904,-38.905,-55.083)
O2': (54.159,-43.092,-53.578)
C6: (57.253,-37.679,-52.076)
C5: (56.711,-38.299,-53.193)
C4: (56.432,-39.621,-53.084)
P: (53.462,-38.800,-58.691)
C4': (53.868,-41.807,-56.202)
C2': (54.184,-41.704,-53.857)
C2: (57.142,-39.708,-51.054)
N1: (57.462,-38.431,-51.008)
N3: (56.618,-40.402,-52.030)
N6: (57.576,-36.392,-51.989)
N7: (56.375,-37.858,-54.456)
N9: (55.923,-40.006,-54.291)
O5': (53.629,-39.722,-57.396)
O3': (51.922,-42.000,-54.716)
OP1: (56.829,-34.224,-60.516)
OP2: (58.008,-34.541,-58.270)
C3': (55.985,-39.197,-59.274)
C1': (58.035,-40.251,-58.886)
C5': (57.043,-37.358,-60.740)
O4': (58.219,-39.342,-59.960)
C8: (58.789,-38.293,-57.442)
O2': (56.242,-41.545,-59.722)
C6: (59.543,-39.648,-54.268)
C5: (59.203,-39.267,-55.582)
C4: (58.783,-40.265,-56.448)
P: (57.715,-35.039,-59.653)
C4': (56.930,-38.833,-60.410)
C2': (56.550,-40.524,-58.797)
C2: (59.011,-41.810,-54.888)
N1: (59.435,-40.954,-53.936)
N3: (58.664,-41.573,-56.158)
N6: (59.952,-38.796,-53.337)
N7: (59.190,-38.027,-56.225)
N9: (58.532,-39.629,-57.645)
O5': (57.203,-36.562,-59.571)
O3': (54.635,-39.284,-59.677)
Image (generated by PyMOL):
PyMOL image
show in jmol