ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1535:A1534

Extra

PDB:
ATOM 1 O3' G A1534 10.416 -43.828 41.643 1.00 58.90 O
ATOM 2 P G A1535 9.204 -44.831 41.300 1.00 85.12 P
ATOM 3 OP1 G A1535 9.804 -46.123 40.873 1.00 70.14 O
ATOM 4 OP2 G A1535 8.253 -44.135 40.397 1.00 69.99 O
ATOM 5 O5' G A1535 8.510 -45.071 42.718 1.00 45.76 O
ATOM 6 C5' G A1535 7.116 -45.428 42.818 1.00 45.76 C
ATOM 7 C4' G A1535 6.520 -44.906 44.113 1.00 45.76 C
ATOM 8 O4' G A1535 6.724 -43.474 44.219 1.00 45.76 O
ATOM 9 C3' G A1535 5.016 -45.093 44.180 1.00 45.76 C
ATOM 10 O3' G A1535 4.703 -46.376 44.685 1.00 45.76 O
ATOM 11 C2' G A1535 4.553 -43.951 45.072 1.00 45.76 C
ATOM 12 O2' G A1535 4.682 -44.231 46.449 1.00 45.76 O
ATOM 13 C1' G A1535 5.540 -42.850 44.687 1.00 45.76 C
ATOM 14 N9 G A1535 5.072 -41.952 43.630 1.00 46.44 N
ATOM 15 C8 G A1535 5.734 -41.667 42.460 1.00 46.45 C
ATOM 16 N7 G A1535 5.110 -40.799 41.714 1.00 46.41 N
ATOM 17 C5 G A1535 3.958 -40.497 42.425 1.00 46.46 C
ATOM 18 C6 G A1535 2.914 -39.614 42.116 1.00 46.39 C
ATOM 19 O6 G A1535 2.792 -38.889 41.126 1.00 46.40 O
ATOM 20 N1 G A1535 1.942 -39.607 43.099 1.00 46.42 N
ATOM 21 C2 G A1535 1.972 -40.354 44.235 1.00 46.47 C
ATOM 22 N2 G A1535 0.930 -40.204 45.053 1.00 46.44 N
ATOM 23 N3 G A1535 2.947 -41.185 44.547 1.00 46.59 N
ATOM 24 C4 G A1535 3.907 -41.206 43.602 1.00 46.54 C
ATOM 25 P A A1536 3.625 -47.277 43.915 1.00 33.76 P
ATOM 26 OP1 A A1536 3.595 -48.618 44.587 1.00 35.73 O
ATOM 27 OP2 A A1536 3.905 -47.183 42.449 1.00 35.73 O
ATOM 28 O5' A A1536 2.254 -46.533 44.234 1.00 44.34 O
TER

ATOM 1 O3' G B1533 12.956 -39.348 39.084 1.00 45.77 O
ATOM 2 P G B1534 12.063 -40.531 38.482 1.00 54.72 P
ATOM 3 OP1 G B1534 12.954 -41.364 37.632 1.00 74.38 O
ATOM 4 OP2 G B1534 10.834 -39.935 37.898 1.00 74.36 O
ATOM 5 O5' G B1534 11.667 -41.375 39.778 1.00 58.90 O
ATOM 6 C5' G B1534 11.497 -40.702 41.032 1.00 58.90 C
ATOM 7 C4' G B1534 11.389 -41.664 42.181 1.00 58.90 C
ATOM 8 O4' G B1534 11.276 -40.820 43.357 1.00 58.90 O
ATOM 9 C3' G B1534 10.135 -42.524 42.151 1.00 58.90 C
ATOM 10 O3' G B1534 10.416 -43.828 41.643 1.00 58.90 O
ATOM 11 C2' G B1534 9.659 -42.496 43.602 1.00 58.90 C
ATOM 12 O2' G B1534 10.303 -43.435 44.440 1.00 58.90 O
ATOM 13 C1' G B1534 10.060 -41.078 44.016 1.00 58.90 C
ATOM 14 N9 G B1534 9.106 -40.071 43.557 1.00 27.80 N
ATOM 15 C8 G B1534 9.168 -39.349 42.386 1.00 27.84 C
ATOM 16 N7 G B1534 8.142 -38.564 42.210 1.00 27.86 N
ATOM 17 C5 G B1534 7.358 -38.766 43.334 1.00 27.84 C
ATOM 18 C6 G B1534 6.120 -38.196 43.690 1.00 27.75 C
ATOM 19 O6 G B1534 5.436 -37.391 43.052 1.00 27.79 O
ATOM 20 N1 G B1534 5.682 -38.659 44.926 1.00 27.74 N
ATOM 21 C2 G B1534 6.358 -39.569 45.715 1.00 27.81 C
ATOM 22 N2 G B1534 5.788 -39.890 46.887 1.00 27.84 N
ATOM 23 N3 G B1534 7.510 -40.122 45.382 1.00 27.85 N
ATOM 24 C4 G B1534 7.949 -39.679 44.188 1.00 27.86 C
ATOM 25 P G B1535 9.204 -44.831 41.300 1.00 85.12 P
ATOM 26 OP1 G B1535 9.804 -46.123 40.873 1.00 70.14 O
ATOM 27 OP2 G B1535 8.253 -44.135 40.397 1.00 69.99 O
ATOM 28 O5' G B1535 8.510 -45.071 42.718 1.00 45.76 O
TER

Atoms:
OP1: (9.804,-46.123,40.873)
OP2: (8.253,-44.135,40.397)
C3': (5.016,-45.093,44.180)
C1': (5.540,-42.850,44.687)
C5': (7.116,-45.428,42.818)
O6: (2.792,-38.889,41.126)
O4': (6.724,-43.474,44.219)
C8: (5.734,-41.667,42.460)
C2: (1.972,-40.354,44.235)
C6: (2.914,-39.614,42.116)
C5: (3.958,-40.497,42.425)
C4: (3.907,-41.206,43.602)
P: (9.204,-44.831,41.300)
C4': (6.520,-44.906,44.113)
C2': (4.553,-43.951,45.072)
O2': (4.682,-44.231,46.449)
N1: (1.942,-39.607,43.099)
N2: (0.930,-40.204,45.053)
N3: (2.947,-41.185,44.547)
N7: (5.110,-40.799,41.714)
N9: (5.072,-41.952,43.630)
O5': (8.510,-45.071,42.718)
O3': (4.703,-46.376,44.685)
OP1: (12.954,-41.364,37.632)
OP2: (10.834,-39.935,37.898)
C3': (10.135,-42.524,42.151)
C1': (10.060,-41.078,44.016)
C5': (11.497,-40.702,41.032)
O6: (5.436,-37.391,43.052)
O4': (11.276,-40.820,43.357)
C8: (9.168,-39.349,42.386)
C2: (6.358,-39.569,45.715)
C6: (6.120,-38.196,43.690)
C5: (7.358,-38.766,43.334)
C4: (7.949,-39.679,44.188)
P: (12.063,-40.531,38.482)
C4': (11.389,-41.664,42.181)
C2': (9.659,-42.496,43.602)
O2': (10.303,-43.435,44.440)
N1: (5.682,-38.659,44.926)
N2: (5.788,-39.890,46.887)
N3: (7.510,-40.122,45.382)
N7: (8.142,-38.564,42.210)
N9: (9.106,-40.071,43.557)
O5': (11.667,-41.375,39.778)
O3': (10.416,-43.828,41.643)
Image (generated by PyMOL):
PyMOL image
show in jmol