Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:Q108:Q107
Extra
PDB:
ATOM 1 O3' G A 107 3.064 -6.753 24.642 1.00 59.37 O
ATOM 2 P G A 108 2.421 -5.467 25.343 1.00 58.34 P
ATOM 3 OP1 G A 108 1.377 -4.972 24.418 1.00 58.47 O
ATOM 4 OP2 G A 108 3.514 -4.574 25.788 1.00 58.09 O
ATOM 5 O5' G A 108 1.732 -6.047 26.665 1.00 57.44 O
ATOM 6 C5' G A 108 0.434 -6.628 26.626 1.00 55.83 C
ATOM 7 C4' G A 108 0.038 -7.151 27.994 1.00 54.67 C
ATOM 8 O4' G A 108 1.072 -8.013 28.525 1.00 53.69 O
ATOM 9 C3' G A 108 -0.116 -6.100 29.084 1.00 54.22 C
ATOM 10 O3' G A 108 -1.353 -5.411 28.950 1.00 54.41 O
ATOM 11 C2' G A 108 -0.077 -6.976 30.329 1.00 53.71 C
ATOM 12 O2' G A 108 -1.326 -7.581 30.619 1.00 53.58 O
ATOM 13 C1' G A 108 0.969 -8.022 29.937 1.00 53.15 C
ATOM 14 N9 G A 108 2.275 -7.727 30.521 1.00 52.38 N
ATOM 15 C8 G A 108 3.356 -7.146 29.903 1.00 52.05 C
ATOM 16 N7 G A 108 4.390 -7.000 30.683 1.00 51.61 N
ATOM 17 C5 G A 108 3.969 -7.514 31.901 1.00 51.78 C
ATOM 18 C6 G A 108 4.656 -7.627 33.134 1.00 51.84 C
ATOM 19 O6 G A 108 5.816 -7.283 33.397 1.00 52.09 O
ATOM 20 N1 G A 108 3.867 -8.212 34.127 1.00 51.91 N
ATOM 21 C2 G A 108 2.571 -8.635 33.946 1.00 51.85 C
ATOM 22 N2 G A 108 1.967 -9.173 35.012 1.00 51.70 N
ATOM 23 N3 G A 108 1.913 -8.533 32.795 1.00 51.96 N
ATOM 24 C4 G A 108 2.668 -7.966 31.818 1.00 52.06 C
ATOM 25 P U A 109 -1.387 -3.819 28.769 1.00 54.56 P
ATOM 26 OP1 U A 109 -2.697 -3.476 28.166 1.00 54.51 O
ATOM 27 OP2 U A 109 -0.140 -3.379 28.096 1.00 54.55 O
ATOM 28 O5' U A 109 -1.380 -3.297 30.282 1.00 54.01 O
TER
ATOM 1 O3' A B 106 9.040 -6.311 23.780 1.00 66.77 O
ATOM 2 P G B 107 8.018 -5.264 24.440 1.00 66.17 P
ATOM 3 OP1 G B 107 7.656 -4.280 23.394 1.00 65.90 O
ATOM 4 OP2 G B 107 8.573 -4.790 25.731 1.00 65.65 O
ATOM 5 O5' G B 107 6.746 -6.185 24.767 1.00 65.04 O
ATOM 6 C5' G B 107 6.075 -6.900 23.725 1.00 62.87 C
ATOM 7 C4' G B 107 5.133 -7.957 24.275 1.00 61.39 C
ATOM 8 O4' G B 107 5.848 -8.972 25.027 1.00 60.96 O
ATOM 9 C3' G B 107 4.102 -7.477 25.283 1.00 60.55 C
ATOM 10 O3' G B 107 3.064 -6.753 24.642 1.00 59.37 O
ATOM 11 C2' G B 107 3.630 -8.822 25.830 1.00 60.47 C
ATOM 12 O2' G B 107 2.775 -9.519 24.941 1.00 60.42 O
ATOM 13 C1' G B 107 4.964 -9.552 25.973 1.00 60.20 C
ATOM 14 N9 G B 107 5.535 -9.429 27.314 1.00 59.81 N
ATOM 15 C8 G B 107 6.587 -8.629 27.693 1.00 59.61 C
ATOM 16 N7 G B 107 6.880 -8.713 28.961 1.00 59.56 N
ATOM 17 C5 G B 107 5.965 -9.630 29.463 1.00 59.58 C
ATOM 18 C6 G B 107 5.798 -10.129 30.784 1.00 59.47 C
ATOM 19 O6 G B 107 6.450 -9.845 31.800 1.00 59.22 O
ATOM 20 N1 G B 107 4.748 -11.044 30.872 1.00 59.20 N
ATOM 21 C2 G B 107 3.962 -11.433 29.813 1.00 59.17 C
ATOM 22 N2 G B 107 3.002 -12.326 30.089 1.00 59.22 N
ATOM 23 N3 G B 107 4.109 -10.978 28.572 1.00 59.42 N
ATOM 24 C4 G B 107 5.127 -10.081 28.463 1.00 59.67 C
ATOM 25 P G B 108 2.421 -5.467 25.343 1.00 58.34 P
ATOM 26 OP1 G B 108 1.377 -4.972 24.418 1.00 58.47 O
ATOM 27 OP2 G B 108 3.514 -4.574 25.788 1.00 58.09 O
ATOM 28 O5' G B 108 1.732 -6.047 26.665 1.00 57.44 O
TER
ATOM 2 P G A 108 2.421 -5.467 25.343 1.00 58.34 P
ATOM 3 OP1 G A 108 1.377 -4.972 24.418 1.00 58.47 O
ATOM 4 OP2 G A 108 3.514 -4.574 25.788 1.00 58.09 O
ATOM 5 O5' G A 108 1.732 -6.047 26.665 1.00 57.44 O
ATOM 6 C5' G A 108 0.434 -6.628 26.626 1.00 55.83 C
ATOM 7 C4' G A 108 0.038 -7.151 27.994 1.00 54.67 C
ATOM 8 O4' G A 108 1.072 -8.013 28.525 1.00 53.69 O
ATOM 9 C3' G A 108 -0.116 -6.100 29.084 1.00 54.22 C
ATOM 10 O3' G A 108 -1.353 -5.411 28.950 1.00 54.41 O
ATOM 11 C2' G A 108 -0.077 -6.976 30.329 1.00 53.71 C
ATOM 12 O2' G A 108 -1.326 -7.581 30.619 1.00 53.58 O
ATOM 13 C1' G A 108 0.969 -8.022 29.937 1.00 53.15 C
ATOM 14 N9 G A 108 2.275 -7.727 30.521 1.00 52.38 N
ATOM 15 C8 G A 108 3.356 -7.146 29.903 1.00 52.05 C
ATOM 16 N7 G A 108 4.390 -7.000 30.683 1.00 51.61 N
ATOM 17 C5 G A 108 3.969 -7.514 31.901 1.00 51.78 C
ATOM 18 C6 G A 108 4.656 -7.627 33.134 1.00 51.84 C
ATOM 19 O6 G A 108 5.816 -7.283 33.397 1.00 52.09 O
ATOM 20 N1 G A 108 3.867 -8.212 34.127 1.00 51.91 N
ATOM 21 C2 G A 108 2.571 -8.635 33.946 1.00 51.85 C
ATOM 22 N2 G A 108 1.967 -9.173 35.012 1.00 51.70 N
ATOM 23 N3 G A 108 1.913 -8.533 32.795 1.00 51.96 N
ATOM 24 C4 G A 108 2.668 -7.966 31.818 1.00 52.06 C
ATOM 25 P U A 109 -1.387 -3.819 28.769 1.00 54.56 P
ATOM 26 OP1 U A 109 -2.697 -3.476 28.166 1.00 54.51 O
ATOM 27 OP2 U A 109 -0.140 -3.379 28.096 1.00 54.55 O
ATOM 28 O5' U A 109 -1.380 -3.297 30.282 1.00 54.01 O
TER
ATOM 1 O3' A B 106 9.040 -6.311 23.780 1.00 66.77 O
ATOM 2 P G B 107 8.018 -5.264 24.440 1.00 66.17 P
ATOM 3 OP1 G B 107 7.656 -4.280 23.394 1.00 65.90 O
ATOM 4 OP2 G B 107 8.573 -4.790 25.731 1.00 65.65 O
ATOM 5 O5' G B 107 6.746 -6.185 24.767 1.00 65.04 O
ATOM 6 C5' G B 107 6.075 -6.900 23.725 1.00 62.87 C
ATOM 7 C4' G B 107 5.133 -7.957 24.275 1.00 61.39 C
ATOM 8 O4' G B 107 5.848 -8.972 25.027 1.00 60.96 O
ATOM 9 C3' G B 107 4.102 -7.477 25.283 1.00 60.55 C
ATOM 10 O3' G B 107 3.064 -6.753 24.642 1.00 59.37 O
ATOM 11 C2' G B 107 3.630 -8.822 25.830 1.00 60.47 C
ATOM 12 O2' G B 107 2.775 -9.519 24.941 1.00 60.42 O
ATOM 13 C1' G B 107 4.964 -9.552 25.973 1.00 60.20 C
ATOM 14 N9 G B 107 5.535 -9.429 27.314 1.00 59.81 N
ATOM 15 C8 G B 107 6.587 -8.629 27.693 1.00 59.61 C
ATOM 16 N7 G B 107 6.880 -8.713 28.961 1.00 59.56 N
ATOM 17 C5 G B 107 5.965 -9.630 29.463 1.00 59.58 C
ATOM 18 C6 G B 107 5.798 -10.129 30.784 1.00 59.47 C
ATOM 19 O6 G B 107 6.450 -9.845 31.800 1.00 59.22 O
ATOM 20 N1 G B 107 4.748 -11.044 30.872 1.00 59.20 N
ATOM 21 C2 G B 107 3.962 -11.433 29.813 1.00 59.17 C
ATOM 22 N2 G B 107 3.002 -12.326 30.089 1.00 59.22 N
ATOM 23 N3 G B 107 4.109 -10.978 28.572 1.00 59.42 N
ATOM 24 C4 G B 107 5.127 -10.081 28.463 1.00 59.67 C
ATOM 25 P G B 108 2.421 -5.467 25.343 1.00 58.34 P
ATOM 26 OP1 G B 108 1.377 -4.972 24.418 1.00 58.47 O
ATOM 27 OP2 G B 108 3.514 -4.574 25.788 1.00 58.09 O
ATOM 28 O5' G B 108 1.732 -6.047 26.665 1.00 57.44 O
TER
Atoms:
OP1: (1.377,-4.972,24.418)
OP2: (3.514,-4.574,25.788)
C3': (-0.116,-6.100,29.084)
C1': (0.969,-8.022,29.937)
C5': (0.434,-6.628,26.626)
O6: (5.816,-7.283,33.397)
O4': (1.072,-8.013,28.525)
C8: (3.356,-7.146,29.903)
C2: (2.571,-8.635,33.946)
C6: (4.656,-7.627,33.134)
C5: (3.969,-7.514,31.901)
C4: (2.668,-7.966,31.818)
P: (2.421,-5.467,25.343)
C4': (0.038,-7.151,27.994)
C2': (-0.077,-6.976,30.329)
O2': (-1.326,-7.581,30.619)
N1: (3.867,-8.212,34.127)
N2: (1.967,-9.173,35.012)
N3: (1.913,-8.533,32.795)
N7: (4.390,-7.000,30.683)
N9: (2.275,-7.727,30.521)
O5': (1.732,-6.047,26.665)
O3': (-1.353,-5.411,28.950)
OP2: (3.514,-4.574,25.788)
C3': (-0.116,-6.100,29.084)
C1': (0.969,-8.022,29.937)
C5': (0.434,-6.628,26.626)
O6: (5.816,-7.283,33.397)
O4': (1.072,-8.013,28.525)
C8: (3.356,-7.146,29.903)
C2: (2.571,-8.635,33.946)
C6: (4.656,-7.627,33.134)
C5: (3.969,-7.514,31.901)
C4: (2.668,-7.966,31.818)
P: (2.421,-5.467,25.343)
C4': (0.038,-7.151,27.994)
C2': (-0.077,-6.976,30.329)
O2': (-1.326,-7.581,30.619)
N1: (3.867,-8.212,34.127)
N2: (1.967,-9.173,35.012)
N3: (1.913,-8.533,32.795)
N7: (4.390,-7.000,30.683)
N9: (2.275,-7.727,30.521)
O5': (1.732,-6.047,26.665)
O3': (-1.353,-5.411,28.950)
OP1: (7.656,-4.280,23.394)
OP2: (8.573,-4.790,25.731)
C3': (4.102,-7.477,25.283)
C1': (4.964,-9.552,25.973)
C5': (6.075,-6.900,23.725)
O6: (6.450,-9.845,31.800)
O4': (5.848,-8.972,25.027)
C8: (6.587,-8.629,27.693)
C2: (3.962,-11.433,29.813)
C6: (5.798,-10.129,30.784)
C5: (5.965,-9.630,29.463)
C4: (5.127,-10.081,28.463)
P: (8.018,-5.264,24.440)
C4': (5.133,-7.957,24.275)
C2': (3.630,-8.822,25.830)
O2': (2.775,-9.519,24.941)
N1: (4.748,-11.044,30.872)
N2: (3.002,-12.326,30.089)
N3: (4.109,-10.978,28.572)
N7: (6.880,-8.713,28.961)
N9: (5.535,-9.429,27.314)
O5': (6.746,-6.185,24.767)
O3': (3.064,-6.753,24.642)
OP2: (8.573,-4.790,25.731)
C3': (4.102,-7.477,25.283)
C1': (4.964,-9.552,25.973)
C5': (6.075,-6.900,23.725)
O6: (6.450,-9.845,31.800)
O4': (5.848,-8.972,25.027)
C8: (6.587,-8.629,27.693)
C2: (3.962,-11.433,29.813)
C6: (5.798,-10.129,30.784)
C5: (5.965,-9.630,29.463)
C4: (5.127,-10.081,28.463)
P: (8.018,-5.264,24.440)
C4': (5.133,-7.957,24.275)
C2': (3.630,-8.822,25.830)
O2': (2.775,-9.519,24.941)
N1: (4.748,-11.044,30.872)
N2: (3.002,-12.326,30.089)
N3: (4.109,-10.978,28.572)
N7: (6.880,-8.713,28.961)
N9: (5.535,-9.429,27.314)
O5': (6.746,-6.185,24.767)
O3': (3.064,-6.753,24.642)
Image (generated by PyMOL):