Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2NUF:D4:D3
Extra
PDB:
ATOM 1 O3' G A 3 -17.852 -1.299 44.611 1.00 51.76 O
ATOM 2 P G A 4 -18.166 -2.724 45.295 1.00 51.50 P
ATOM 3 OP1 G A 4 -18.742 -2.418 46.629 1.00 49.34 O
ATOM 4 OP2 G A 4 -16.981 -3.616 45.200 1.00 53.10 O
ATOM 5 O5' G A 4 -19.318 -3.345 44.380 1.00 54.78 O
ATOM 6 C5' G A 4 -20.607 -2.739 44.327 1.00 50.83 C
ATOM 7 C4' G A 4 -21.475 -3.440 43.320 1.00 53.95 C
ATOM 8 O4' G A 4 -20.913 -3.279 41.991 1.00 54.60 O
ATOM 9 C3' G A 4 -21.585 -4.945 43.477 1.00 53.57 C
ATOM 10 O3' G A 4 -22.546 -5.275 44.467 1.00 54.52 O
ATOM 11 C2' G A 4 -22.048 -5.353 42.087 1.00 55.01 C
ATOM 12 O2' G A 4 -23.417 -5.035 41.887 1.00 53.53 O
ATOM 13 C1' G A 4 -21.174 -4.445 41.219 1.00 52.26 C
ATOM 14 N9 G A 4 -19.893 -5.053 40.878 1.00 48.63 N
ATOM 15 C8 G A 4 -18.691 -4.826 41.496 1.00 46.87 C
ATOM 16 N7 G A 4 -17.714 -5.525 40.987 1.00 47.26 N
ATOM 17 C5 G A 4 -18.304 -6.257 39.971 1.00 41.30 C
ATOM 18 C6 G A 4 -17.749 -7.210 39.086 1.00 44.63 C
ATOM 19 O6 G A 4 -16.581 -7.609 39.006 1.00 48.29 O
ATOM 20 N1 G A 4 -18.706 -7.730 38.233 1.00 42.83 N
ATOM 21 C2 G A 4 -20.026 -7.391 38.231 1.00 40.69 C
ATOM 22 N2 G A 4 -20.787 -8.056 37.368 1.00 39.09 N
ATOM 23 N3 G A 4 -20.560 -6.485 39.032 1.00 46.22 N
ATOM 24 C4 G A 4 -19.648 -5.971 39.881 1.00 46.92 C
ATOM 25 P U A 5 -22.485 -6.706 45.195 1.00 54.19 P
ATOM 26 OP1 U A 5 -23.655 -6.757 46.094 1.00 55.54 O
ATOM 27 OP2 U A 5 -21.129 -6.928 45.741 1.00 54.66 O
ATOM 28 O5' U A 5 -22.739 -7.747 44.021 1.00 55.17 O
TER
ATOM 1 O3' A B 2 -12.129 0.535 43.512 1.00 45.28 O
ATOM 2 P G B 3 -12.689 -0.745 44.312 1.00 45.39 P
ATOM 3 OP1 G B 3 -12.706 -0.426 45.759 1.00 47.81 O
ATOM 4 OP2 G B 3 -11.988 -1.957 43.839 1.00 50.12 O
ATOM 5 O5' G B 3 -14.208 -0.844 43.858 1.00 49.13 O
ATOM 6 C5' G B 3 -15.094 0.224 44.125 1.00 45.14 C
ATOM 7 C4' G B 3 -16.342 0.080 43.305 1.00 48.72 C
ATOM 8 O4' G B 3 -16.016 0.149 41.890 1.00 48.15 O
ATOM 9 C3' G B 3 -17.089 -1.237 43.411 1.00 48.07 C
ATOM 10 O3' G B 3 -17.852 -1.299 44.611 1.00 51.76 O
ATOM 11 C2' G B 3 -17.976 -1.137 42.181 1.00 48.89 C
ATOM 12 O2' G B 3 -19.002 -0.182 42.378 1.00 50.07 O
ATOM 13 C1' G B 3 -16.984 -0.586 41.156 1.00 48.98 C
ATOM 14 N9 G B 3 -16.300 -1.651 40.433 1.00 47.54 N
ATOM 15 C8 G B 3 -15.026 -2.116 40.647 1.00 44.93 C
ATOM 16 N7 G B 3 -14.700 -3.096 39.847 1.00 45.69 N
ATOM 17 C5 G B 3 -15.829 -3.288 39.058 1.00 45.70 C
ATOM 18 C6 G B 3 -16.085 -4.227 38.016 1.00 45.15 C
ATOM 19 O6 G B 3 -15.338 -5.108 37.561 1.00 44.58 O
ATOM 20 N1 G B 3 -17.363 -4.070 37.495 1.00 41.93 N
ATOM 21 C2 G B 3 -18.276 -3.136 37.909 1.00 43.14 C
ATOM 22 N2 G B 3 -19.461 -3.136 37.267 1.00 40.43 N
ATOM 23 N3 G B 3 -18.053 -2.265 38.875 1.00 43.63 N
ATOM 24 C4 G B 3 -16.821 -2.398 39.402 1.00 44.44 C
ATOM 25 P G B 4 -18.166 -2.724 45.295 1.00 51.50 P
ATOM 26 OP1 G B 4 -18.742 -2.418 46.629 1.00 49.34 O
ATOM 27 OP2 G B 4 -16.981 -3.616 45.200 1.00 53.10 O
ATOM 28 O5' G B 4 -19.318 -3.345 44.380 1.00 54.78 O
TER
ATOM 2 P G A 4 -18.166 -2.724 45.295 1.00 51.50 P
ATOM 3 OP1 G A 4 -18.742 -2.418 46.629 1.00 49.34 O
ATOM 4 OP2 G A 4 -16.981 -3.616 45.200 1.00 53.10 O
ATOM 5 O5' G A 4 -19.318 -3.345 44.380 1.00 54.78 O
ATOM 6 C5' G A 4 -20.607 -2.739 44.327 1.00 50.83 C
ATOM 7 C4' G A 4 -21.475 -3.440 43.320 1.00 53.95 C
ATOM 8 O4' G A 4 -20.913 -3.279 41.991 1.00 54.60 O
ATOM 9 C3' G A 4 -21.585 -4.945 43.477 1.00 53.57 C
ATOM 10 O3' G A 4 -22.546 -5.275 44.467 1.00 54.52 O
ATOM 11 C2' G A 4 -22.048 -5.353 42.087 1.00 55.01 C
ATOM 12 O2' G A 4 -23.417 -5.035 41.887 1.00 53.53 O
ATOM 13 C1' G A 4 -21.174 -4.445 41.219 1.00 52.26 C
ATOM 14 N9 G A 4 -19.893 -5.053 40.878 1.00 48.63 N
ATOM 15 C8 G A 4 -18.691 -4.826 41.496 1.00 46.87 C
ATOM 16 N7 G A 4 -17.714 -5.525 40.987 1.00 47.26 N
ATOM 17 C5 G A 4 -18.304 -6.257 39.971 1.00 41.30 C
ATOM 18 C6 G A 4 -17.749 -7.210 39.086 1.00 44.63 C
ATOM 19 O6 G A 4 -16.581 -7.609 39.006 1.00 48.29 O
ATOM 20 N1 G A 4 -18.706 -7.730 38.233 1.00 42.83 N
ATOM 21 C2 G A 4 -20.026 -7.391 38.231 1.00 40.69 C
ATOM 22 N2 G A 4 -20.787 -8.056 37.368 1.00 39.09 N
ATOM 23 N3 G A 4 -20.560 -6.485 39.032 1.00 46.22 N
ATOM 24 C4 G A 4 -19.648 -5.971 39.881 1.00 46.92 C
ATOM 25 P U A 5 -22.485 -6.706 45.195 1.00 54.19 P
ATOM 26 OP1 U A 5 -23.655 -6.757 46.094 1.00 55.54 O
ATOM 27 OP2 U A 5 -21.129 -6.928 45.741 1.00 54.66 O
ATOM 28 O5' U A 5 -22.739 -7.747 44.021 1.00 55.17 O
TER
ATOM 1 O3' A B 2 -12.129 0.535 43.512 1.00 45.28 O
ATOM 2 P G B 3 -12.689 -0.745 44.312 1.00 45.39 P
ATOM 3 OP1 G B 3 -12.706 -0.426 45.759 1.00 47.81 O
ATOM 4 OP2 G B 3 -11.988 -1.957 43.839 1.00 50.12 O
ATOM 5 O5' G B 3 -14.208 -0.844 43.858 1.00 49.13 O
ATOM 6 C5' G B 3 -15.094 0.224 44.125 1.00 45.14 C
ATOM 7 C4' G B 3 -16.342 0.080 43.305 1.00 48.72 C
ATOM 8 O4' G B 3 -16.016 0.149 41.890 1.00 48.15 O
ATOM 9 C3' G B 3 -17.089 -1.237 43.411 1.00 48.07 C
ATOM 10 O3' G B 3 -17.852 -1.299 44.611 1.00 51.76 O
ATOM 11 C2' G B 3 -17.976 -1.137 42.181 1.00 48.89 C
ATOM 12 O2' G B 3 -19.002 -0.182 42.378 1.00 50.07 O
ATOM 13 C1' G B 3 -16.984 -0.586 41.156 1.00 48.98 C
ATOM 14 N9 G B 3 -16.300 -1.651 40.433 1.00 47.54 N
ATOM 15 C8 G B 3 -15.026 -2.116 40.647 1.00 44.93 C
ATOM 16 N7 G B 3 -14.700 -3.096 39.847 1.00 45.69 N
ATOM 17 C5 G B 3 -15.829 -3.288 39.058 1.00 45.70 C
ATOM 18 C6 G B 3 -16.085 -4.227 38.016 1.00 45.15 C
ATOM 19 O6 G B 3 -15.338 -5.108 37.561 1.00 44.58 O
ATOM 20 N1 G B 3 -17.363 -4.070 37.495 1.00 41.93 N
ATOM 21 C2 G B 3 -18.276 -3.136 37.909 1.00 43.14 C
ATOM 22 N2 G B 3 -19.461 -3.136 37.267 1.00 40.43 N
ATOM 23 N3 G B 3 -18.053 -2.265 38.875 1.00 43.63 N
ATOM 24 C4 G B 3 -16.821 -2.398 39.402 1.00 44.44 C
ATOM 25 P G B 4 -18.166 -2.724 45.295 1.00 51.50 P
ATOM 26 OP1 G B 4 -18.742 -2.418 46.629 1.00 49.34 O
ATOM 27 OP2 G B 4 -16.981 -3.616 45.200 1.00 53.10 O
ATOM 28 O5' G B 4 -19.318 -3.345 44.380 1.00 54.78 O
TER
Atoms:
OP1: (-18.742,-2.418,46.629)
OP2: (-16.981,-3.616,45.200)
C3': (-21.585,-4.945,43.477)
C1': (-21.174,-4.445,41.219)
C5': (-20.607,-2.739,44.327)
O6: (-16.581,-7.609,39.006)
O4': (-20.913,-3.279,41.991)
C8: (-18.691,-4.826,41.496)
C2: (-20.026,-7.391,38.231)
C6: (-17.749,-7.210,39.086)
C5: (-18.304,-6.257,39.971)
C4: (-19.648,-5.971,39.881)
P: (-18.166,-2.724,45.295)
C4': (-21.475,-3.440,43.320)
C2': (-22.048,-5.353,42.087)
O2': (-23.417,-5.035,41.887)
N1: (-18.706,-7.730,38.233)
N2: (-20.787,-8.056,37.368)
N3: (-20.560,-6.485,39.032)
N7: (-17.714,-5.525,40.987)
N9: (-19.893,-5.053,40.878)
O5': (-19.318,-3.345,44.380)
O3': (-22.546,-5.275,44.467)
OP2: (-16.981,-3.616,45.200)
C3': (-21.585,-4.945,43.477)
C1': (-21.174,-4.445,41.219)
C5': (-20.607,-2.739,44.327)
O6: (-16.581,-7.609,39.006)
O4': (-20.913,-3.279,41.991)
C8: (-18.691,-4.826,41.496)
C2: (-20.026,-7.391,38.231)
C6: (-17.749,-7.210,39.086)
C5: (-18.304,-6.257,39.971)
C4: (-19.648,-5.971,39.881)
P: (-18.166,-2.724,45.295)
C4': (-21.475,-3.440,43.320)
C2': (-22.048,-5.353,42.087)
O2': (-23.417,-5.035,41.887)
N1: (-18.706,-7.730,38.233)
N2: (-20.787,-8.056,37.368)
N3: (-20.560,-6.485,39.032)
N7: (-17.714,-5.525,40.987)
N9: (-19.893,-5.053,40.878)
O5': (-19.318,-3.345,44.380)
O3': (-22.546,-5.275,44.467)
OP1: (-12.706,-0.426,45.759)
OP2: (-11.988,-1.957,43.839)
C3': (-17.089,-1.237,43.411)
C1': (-16.984,-0.586,41.156)
C5': (-15.094,0.224,44.125)
O6: (-15.338,-5.108,37.561)
O4': (-16.016,0.149,41.890)
C8: (-15.026,-2.116,40.647)
C2: (-18.276,-3.136,37.909)
C6: (-16.085,-4.227,38.016)
C5: (-15.829,-3.288,39.058)
C4: (-16.821,-2.398,39.402)
P: (-12.689,-0.745,44.312)
C4': (-16.342,0.080,43.305)
C2': (-17.976,-1.137,42.181)
O2': (-19.002,-0.182,42.378)
N1: (-17.363,-4.070,37.495)
N2: (-19.461,-3.136,37.267)
N3: (-18.053,-2.265,38.875)
N7: (-14.700,-3.096,39.847)
N9: (-16.300,-1.651,40.433)
O5': (-14.208,-0.844,43.858)
O3': (-17.852,-1.299,44.611)
OP2: (-11.988,-1.957,43.839)
C3': (-17.089,-1.237,43.411)
C1': (-16.984,-0.586,41.156)
C5': (-15.094,0.224,44.125)
O6: (-15.338,-5.108,37.561)
O4': (-16.016,0.149,41.890)
C8: (-15.026,-2.116,40.647)
C2: (-18.276,-3.136,37.909)
C6: (-16.085,-4.227,38.016)
C5: (-15.829,-3.288,39.058)
C4: (-16.821,-2.398,39.402)
P: (-12.689,-0.745,44.312)
C4': (-16.342,0.080,43.305)
C2': (-17.976,-1.137,42.181)
O2': (-19.002,-0.182,42.378)
N1: (-17.363,-4.070,37.495)
N2: (-19.461,-3.136,37.267)
N3: (-18.053,-2.265,38.875)
N7: (-14.700,-3.096,39.847)
N9: (-16.300,-1.651,40.433)
O5': (-14.208,-0.844,43.858)
O3': (-17.852,-1.299,44.611)
Image (generated by PyMOL):