Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1D4R:A13:A12
Extra
PDB:
ATOM 1 O3' G A 12 31.779 -12.040 -3.904 1.00 76.47 O
ATOM 2 P G A 13 31.055 -12.003 -5.337 1.00 81.92 P
ATOM 3 OP1 G A 13 32.112 -11.850 -6.374 1.00 82.53 O
ATOM 4 OP2 G A 13 29.936 -11.020 -5.273 1.00 82.28 O
ATOM 5 O5' G A 13 30.425 -13.456 -5.483 1.00 81.22 O
ATOM 6 C5' G A 13 31.241 -14.612 -5.346 1.00 84.15 C
ATOM 7 C4' G A 13 30.385 -15.836 -5.137 1.00 87.31 C
ATOM 8 O4' G A 13 29.832 -15.834 -3.791 1.00 87.29 O
ATOM 9 C3' G A 13 29.160 -15.947 -6.026 1.00 88.06 C
ATOM 10 O3' G A 13 29.494 -16.417 -7.320 1.00 90.00 O
ATOM 11 C2' G A 13 28.301 -16.918 -5.231 1.00 86.09 C
ATOM 12 O2' G A 13 28.703 -18.267 -5.349 1.00 86.43 O
ATOM 13 C1' G A 13 28.527 -16.397 -3.811 1.00 84.75 C
ATOM 14 N9 G A 13 27.561 -15.356 -3.466 1.00 82.12 N
ATOM 15 C8 G A 13 27.766 -13.996 -3.412 1.00 78.80 C
ATOM 16 N7 G A 13 26.683 -13.328 -3.127 1.00 78.94 N
ATOM 17 C5 G A 13 25.710 -14.305 -2.973 1.00 75.30 C
ATOM 18 C6 G A 13 24.333 -14.188 -2.665 1.00 74.86 C
ATOM 19 O6 G A 13 23.668 -13.161 -2.467 1.00 72.51 O
ATOM 20 N1 G A 13 23.722 -15.435 -2.601 1.00 76.85 N
ATOM 21 C2 G A 13 24.353 -16.638 -2.807 1.00 73.92 C
ATOM 22 N2 G A 13 23.597 -17.735 -2.696 1.00 76.06 N
ATOM 23 N3 G A 13 25.629 -16.756 -3.098 1.00 69.73 N
ATOM 24 C4 G A 13 26.242 -15.560 -3.165 1.00 75.23 C
ATOM 25 P A A 14 28.637 -15.930 -8.587 1.00 93.76 P
ATOM 26 OP1 A A 14 29.618 -15.633 -9.657 1.00 98.88 O
ATOM 27 OP2 A A 14 27.666 -14.882 -8.175 1.00 94.93 O
ATOM 28 O5' A A 14 27.822 -17.229 -9.022 1.00 90.82 O
TER
ATOM 1 O3' G B 11 29.989 -7.713 0.086 1.00 67.62 O
ATOM 2 P G B 12 29.564 -8.036 -1.427 1.00 68.96 P
ATOM 3 OP1 G B 12 30.371 -7.116 -2.272 1.00 69.54 O
ATOM 4 OP2 G B 12 28.087 -8.062 -1.574 1.00 65.57 O
ATOM 5 O5' G B 12 30.091 -9.521 -1.662 1.00 68.28 O
ATOM 6 C5' G B 12 31.481 -9.822 -1.576 1.00 71.05 C
ATOM 7 C4' G B 12 31.695 -11.312 -1.597 1.00 72.71 C
ATOM 8 O4' G B 12 31.157 -11.891 -0.378 1.00 75.73 O
ATOM 9 C3' G B 12 30.992 -12.055 -2.719 1.00 75.55 C
ATOM 10 O3' G B 12 31.779 -12.040 -3.904 1.00 76.47 O
ATOM 11 C2' G B 12 30.849 -13.458 -2.139 1.00 75.41 C
ATOM 12 O2' G B 12 32.008 -14.251 -2.285 1.00 72.85 O
ATOM 13 C1' G B 12 30.579 -13.156 -0.661 1.00 75.92 C
ATOM 14 N9 G B 12 29.157 -13.110 -0.323 1.00 73.99 N
ATOM 15 C8 G B 12 28.389 -11.990 -0.110 1.00 77.85 C
ATOM 16 N7 G B 12 27.142 -12.266 0.151 1.00 78.24 N
ATOM 17 C5 G B 12 27.084 -13.650 0.115 1.00 75.90 C
ATOM 18 C6 G B 12 25.991 -14.523 0.323 1.00 78.61 C
ATOM 19 O6 G B 12 24.822 -14.235 0.591 1.00 81.78 O
ATOM 20 N1 G B 12 26.368 -15.855 0.194 1.00 72.87 N
ATOM 21 C2 G B 12 27.638 -16.286 -0.096 1.00 73.23 C
ATOM 22 N2 G B 12 27.811 -17.608 -0.179 1.00 66.02 N
ATOM 23 N3 G B 12 28.665 -15.480 -0.289 1.00 72.59 N
ATOM 24 C4 G B 12 28.319 -14.186 -0.170 1.00 72.95 C
ATOM 25 P G B 13 31.055 -12.003 -5.337 1.00 81.92 P
ATOM 26 OP1 G B 13 32.112 -11.850 -6.374 1.00 82.53 O
ATOM 27 OP2 G B 13 29.936 -11.020 -5.273 1.00 82.28 O
ATOM 28 O5' G B 13 30.425 -13.456 -5.483 1.00 81.22 O
TER
ATOM 2 P G A 13 31.055 -12.003 -5.337 1.00 81.92 P
ATOM 3 OP1 G A 13 32.112 -11.850 -6.374 1.00 82.53 O
ATOM 4 OP2 G A 13 29.936 -11.020 -5.273 1.00 82.28 O
ATOM 5 O5' G A 13 30.425 -13.456 -5.483 1.00 81.22 O
ATOM 6 C5' G A 13 31.241 -14.612 -5.346 1.00 84.15 C
ATOM 7 C4' G A 13 30.385 -15.836 -5.137 1.00 87.31 C
ATOM 8 O4' G A 13 29.832 -15.834 -3.791 1.00 87.29 O
ATOM 9 C3' G A 13 29.160 -15.947 -6.026 1.00 88.06 C
ATOM 10 O3' G A 13 29.494 -16.417 -7.320 1.00 90.00 O
ATOM 11 C2' G A 13 28.301 -16.918 -5.231 1.00 86.09 C
ATOM 12 O2' G A 13 28.703 -18.267 -5.349 1.00 86.43 O
ATOM 13 C1' G A 13 28.527 -16.397 -3.811 1.00 84.75 C
ATOM 14 N9 G A 13 27.561 -15.356 -3.466 1.00 82.12 N
ATOM 15 C8 G A 13 27.766 -13.996 -3.412 1.00 78.80 C
ATOM 16 N7 G A 13 26.683 -13.328 -3.127 1.00 78.94 N
ATOM 17 C5 G A 13 25.710 -14.305 -2.973 1.00 75.30 C
ATOM 18 C6 G A 13 24.333 -14.188 -2.665 1.00 74.86 C
ATOM 19 O6 G A 13 23.668 -13.161 -2.467 1.00 72.51 O
ATOM 20 N1 G A 13 23.722 -15.435 -2.601 1.00 76.85 N
ATOM 21 C2 G A 13 24.353 -16.638 -2.807 1.00 73.92 C
ATOM 22 N2 G A 13 23.597 -17.735 -2.696 1.00 76.06 N
ATOM 23 N3 G A 13 25.629 -16.756 -3.098 1.00 69.73 N
ATOM 24 C4 G A 13 26.242 -15.560 -3.165 1.00 75.23 C
ATOM 25 P A A 14 28.637 -15.930 -8.587 1.00 93.76 P
ATOM 26 OP1 A A 14 29.618 -15.633 -9.657 1.00 98.88 O
ATOM 27 OP2 A A 14 27.666 -14.882 -8.175 1.00 94.93 O
ATOM 28 O5' A A 14 27.822 -17.229 -9.022 1.00 90.82 O
TER
ATOM 1 O3' G B 11 29.989 -7.713 0.086 1.00 67.62 O
ATOM 2 P G B 12 29.564 -8.036 -1.427 1.00 68.96 P
ATOM 3 OP1 G B 12 30.371 -7.116 -2.272 1.00 69.54 O
ATOM 4 OP2 G B 12 28.087 -8.062 -1.574 1.00 65.57 O
ATOM 5 O5' G B 12 30.091 -9.521 -1.662 1.00 68.28 O
ATOM 6 C5' G B 12 31.481 -9.822 -1.576 1.00 71.05 C
ATOM 7 C4' G B 12 31.695 -11.312 -1.597 1.00 72.71 C
ATOM 8 O4' G B 12 31.157 -11.891 -0.378 1.00 75.73 O
ATOM 9 C3' G B 12 30.992 -12.055 -2.719 1.00 75.55 C
ATOM 10 O3' G B 12 31.779 -12.040 -3.904 1.00 76.47 O
ATOM 11 C2' G B 12 30.849 -13.458 -2.139 1.00 75.41 C
ATOM 12 O2' G B 12 32.008 -14.251 -2.285 1.00 72.85 O
ATOM 13 C1' G B 12 30.579 -13.156 -0.661 1.00 75.92 C
ATOM 14 N9 G B 12 29.157 -13.110 -0.323 1.00 73.99 N
ATOM 15 C8 G B 12 28.389 -11.990 -0.110 1.00 77.85 C
ATOM 16 N7 G B 12 27.142 -12.266 0.151 1.00 78.24 N
ATOM 17 C5 G B 12 27.084 -13.650 0.115 1.00 75.90 C
ATOM 18 C6 G B 12 25.991 -14.523 0.323 1.00 78.61 C
ATOM 19 O6 G B 12 24.822 -14.235 0.591 1.00 81.78 O
ATOM 20 N1 G B 12 26.368 -15.855 0.194 1.00 72.87 N
ATOM 21 C2 G B 12 27.638 -16.286 -0.096 1.00 73.23 C
ATOM 22 N2 G B 12 27.811 -17.608 -0.179 1.00 66.02 N
ATOM 23 N3 G B 12 28.665 -15.480 -0.289 1.00 72.59 N
ATOM 24 C4 G B 12 28.319 -14.186 -0.170 1.00 72.95 C
ATOM 25 P G B 13 31.055 -12.003 -5.337 1.00 81.92 P
ATOM 26 OP1 G B 13 32.112 -11.850 -6.374 1.00 82.53 O
ATOM 27 OP2 G B 13 29.936 -11.020 -5.273 1.00 82.28 O
ATOM 28 O5' G B 13 30.425 -13.456 -5.483 1.00 81.22 O
TER
Atoms:
OP1: (32.112,-11.850,-6.374)
OP2: (29.936,-11.020,-5.273)
C3': (29.160,-15.947,-6.026)
C1': (28.527,-16.397,-3.811)
C5': (31.241,-14.612,-5.346)
O6: (23.668,-13.161,-2.467)
O4': (29.832,-15.834,-3.791)
C8: (27.766,-13.996,-3.412)
C2: (24.353,-16.638,-2.807)
C6: (24.333,-14.188,-2.665)
C5: (25.710,-14.305,-2.973)
C4: (26.242,-15.560,-3.165)
P: (31.055,-12.003,-5.337)
C4': (30.385,-15.836,-5.137)
C2': (28.301,-16.918,-5.231)
O2': (28.703,-18.267,-5.349)
N1: (23.722,-15.435,-2.601)
N2: (23.597,-17.735,-2.696)
N3: (25.629,-16.756,-3.098)
N7: (26.683,-13.328,-3.127)
N9: (27.561,-15.356,-3.466)
O5': (30.425,-13.456,-5.483)
O3': (29.494,-16.417,-7.320)
OP2: (29.936,-11.020,-5.273)
C3': (29.160,-15.947,-6.026)
C1': (28.527,-16.397,-3.811)
C5': (31.241,-14.612,-5.346)
O6: (23.668,-13.161,-2.467)
O4': (29.832,-15.834,-3.791)
C8: (27.766,-13.996,-3.412)
C2: (24.353,-16.638,-2.807)
C6: (24.333,-14.188,-2.665)
C5: (25.710,-14.305,-2.973)
C4: (26.242,-15.560,-3.165)
P: (31.055,-12.003,-5.337)
C4': (30.385,-15.836,-5.137)
C2': (28.301,-16.918,-5.231)
O2': (28.703,-18.267,-5.349)
N1: (23.722,-15.435,-2.601)
N2: (23.597,-17.735,-2.696)
N3: (25.629,-16.756,-3.098)
N7: (26.683,-13.328,-3.127)
N9: (27.561,-15.356,-3.466)
O5': (30.425,-13.456,-5.483)
O3': (29.494,-16.417,-7.320)
OP1: (30.371,-7.116,-2.272)
OP2: (28.087,-8.062,-1.574)
C3': (30.992,-12.055,-2.719)
C1': (30.579,-13.156,-0.661)
C5': (31.481,-9.822,-1.576)
O6: (24.822,-14.235,0.591)
O4': (31.157,-11.891,-0.378)
C8: (28.389,-11.990,-0.110)
C2: (27.638,-16.286,-0.096)
C6: (25.991,-14.523,0.323)
C5: (27.084,-13.650,0.115)
C4: (28.319,-14.186,-0.170)
P: (29.564,-8.036,-1.427)
C4': (31.695,-11.312,-1.597)
C2': (30.849,-13.458,-2.139)
O2': (32.008,-14.251,-2.285)
N1: (26.368,-15.855,0.194)
N2: (27.811,-17.608,-0.179)
N3: (28.665,-15.480,-0.289)
N7: (27.142,-12.266,0.151)
N9: (29.157,-13.110,-0.323)
O5': (30.091,-9.521,-1.662)
O3': (31.779,-12.040,-3.904)
OP2: (28.087,-8.062,-1.574)
C3': (30.992,-12.055,-2.719)
C1': (30.579,-13.156,-0.661)
C5': (31.481,-9.822,-1.576)
O6: (24.822,-14.235,0.591)
O4': (31.157,-11.891,-0.378)
C8: (28.389,-11.990,-0.110)
C2: (27.638,-16.286,-0.096)
C6: (25.991,-14.523,0.323)
C5: (27.084,-13.650,0.115)
C4: (28.319,-14.186,-0.170)
P: (29.564,-8.036,-1.427)
C4': (31.695,-11.312,-1.597)
C2': (30.849,-13.458,-2.139)
O2': (32.008,-14.251,-2.285)
N1: (26.368,-15.855,0.194)
N2: (27.811,-17.608,-0.179)
N3: (28.665,-15.480,-0.289)
N7: (27.142,-12.266,0.151)
N9: (29.157,-13.110,-0.323)
O5': (30.091,-9.521,-1.662)
O3': (31.779,-12.040,-3.904)
Image (generated by PyMOL):