Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1232:A1231
Extra
PDB:
ATOM 1 O3' G A1231 -28.280 164.509 209.640 1.00 16.28 O
ATOM 2 P G A1232 -29.222 165.535 208.902 1.00 3.80 P
ATOM 3 OP1 G A1232 -29.411 165.042 207.498 1.00 3.80 O
ATOM 4 OP2 G A1232 -28.629 166.862 209.105 1.00 3.80 O
ATOM 5 O5' G A1232 -30.586 165.399 209.728 1.00 3.80 O
ATOM 6 C5' G A1232 -31.184 164.125 209.978 1.00 3.80 C
ATOM 7 C4' G A1232 -32.336 164.231 210.954 1.00 3.80 C
ATOM 8 O4' G A1232 -31.853 164.735 212.235 1.00 3.80 O
ATOM 9 C3' G A1232 -33.451 165.201 210.571 1.00 3.80 C
ATOM 10 O3' G A1232 -34.396 164.646 209.691 1.00 3.80 O
ATOM 11 C2' G A1232 -34.044 165.584 211.911 1.00 3.80 C
ATOM 12 O2' G A1232 -34.907 164.572 212.386 1.00 3.80 O
ATOM 13 C1' G A1232 -32.799 165.629 212.788 1.00 3.80 C
ATOM 14 N9 G A1232 -32.210 166.981 212.817 1.00 4.04 N
ATOM 15 C8 G A1232 -31.167 167.470 212.090 1.00 4.04 C
ATOM 16 N7 G A1232 -30.915 168.716 212.355 1.00 4.04 N
ATOM 17 C5 G A1232 -31.861 169.088 213.314 1.00 4.04 C
ATOM 18 C6 G A1232 -32.125 170.319 214.019 1.00 4.04 C
ATOM 19 O6 G A1232 -31.572 171.427 213.978 1.00 4.04 O
ATOM 20 N1 G A1232 -33.191 170.222 214.879 1.00 4.04 N
ATOM 21 C2 G A1232 -33.917 169.099 215.054 1.00 4.04 C
ATOM 22 N2 G A1232 -34.900 169.193 215.948 1.00 4.04 N
ATOM 23 N3 G A1232 -33.698 167.961 214.429 1.00 4.04 N
ATOM 24 C4 G A1232 -32.661 168.017 213.583 1.00 4.04 C
ATOM 25 P U A1233 -35.076 165.562 208.560 1.00 16.58 P
ATOM 26 OP1 U A1233 -35.868 164.652 207.670 1.00 16.58 O
ATOM 27 OP2 U A1233 -33.986 166.399 207.970 1.00 16.58 O
ATOM 28 O5' U A1233 -36.054 166.473 209.389 1.00 16.58 O
TER
ATOM 1 O3' A B1230 -23.292 164.565 212.555 1.00 10.72 O
ATOM 2 P G B1231 -22.886 165.147 211.125 1.00 16.28 P
ATOM 3 OP1 G B1231 -22.296 164.028 210.343 1.00 16.28 O
ATOM 4 OP2 G B1231 -22.066 166.383 211.368 1.00 16.28 O
ATOM 5 O5' G B1231 -24.307 165.558 210.528 1.00 16.28 O
ATOM 6 C5' G B1231 -25.185 164.591 210.006 1.00 16.28 C
ATOM 7 C4' G B1231 -26.293 164.213 210.972 1.00 16.28 C
ATOM 8 O4' G B1231 -25.967 164.529 212.343 1.00 16.28 O
ATOM 9 C3' G B1231 -27.614 164.907 210.794 1.00 16.28 C
ATOM 10 O3' G B1231 -28.280 164.509 209.640 1.00 16.28 O
ATOM 11 C2' G B1231 -28.328 164.510 212.069 1.00 16.28 C
ATOM 12 O2' G B1231 -28.718 163.154 212.025 1.00 16.28 O
ATOM 13 C1' G B1231 -27.193 164.651 213.076 1.00 16.28 C
ATOM 14 N9 G B1231 -27.252 165.966 213.727 1.00 16.08 N
ATOM 15 C8 G B1231 -26.332 166.979 213.721 1.00 16.08 C
ATOM 16 N7 G B1231 -26.756 168.034 214.369 1.00 16.08 N
ATOM 17 C5 G B1231 -28.031 167.709 214.806 1.00 16.08 C
ATOM 18 C6 G B1231 -28.955 168.479 215.554 1.00 16.08 C
ATOM 19 O6 G B1231 -28.822 169.631 215.992 1.00 16.08 O
ATOM 20 N1 G B1231 -30.120 167.753 215.768 1.00 16.08 N
ATOM 21 C2 G B1231 -30.361 166.479 215.331 1.00 16.08 C
ATOM 22 N2 G B1231 -31.555 165.987 215.662 1.00 16.08 N
ATOM 23 N3 G B1231 -29.509 165.748 214.630 1.00 16.08 N
ATOM 24 C4 G B1231 -28.361 166.429 214.409 1.00 16.08 C
ATOM 25 P G B1232 -29.222 165.535 208.902 1.00 3.80 P
ATOM 26 OP1 G B1232 -29.411 165.042 207.498 1.00 3.80 O
ATOM 27 OP2 G B1232 -28.629 166.862 209.105 1.00 3.80 O
ATOM 28 O5' G B1232 -30.586 165.399 209.728 1.00 3.80 O
TER
ATOM 2 P G A1232 -29.222 165.535 208.902 1.00 3.80 P
ATOM 3 OP1 G A1232 -29.411 165.042 207.498 1.00 3.80 O
ATOM 4 OP2 G A1232 -28.629 166.862 209.105 1.00 3.80 O
ATOM 5 O5' G A1232 -30.586 165.399 209.728 1.00 3.80 O
ATOM 6 C5' G A1232 -31.184 164.125 209.978 1.00 3.80 C
ATOM 7 C4' G A1232 -32.336 164.231 210.954 1.00 3.80 C
ATOM 8 O4' G A1232 -31.853 164.735 212.235 1.00 3.80 O
ATOM 9 C3' G A1232 -33.451 165.201 210.571 1.00 3.80 C
ATOM 10 O3' G A1232 -34.396 164.646 209.691 1.00 3.80 O
ATOM 11 C2' G A1232 -34.044 165.584 211.911 1.00 3.80 C
ATOM 12 O2' G A1232 -34.907 164.572 212.386 1.00 3.80 O
ATOM 13 C1' G A1232 -32.799 165.629 212.788 1.00 3.80 C
ATOM 14 N9 G A1232 -32.210 166.981 212.817 1.00 4.04 N
ATOM 15 C8 G A1232 -31.167 167.470 212.090 1.00 4.04 C
ATOM 16 N7 G A1232 -30.915 168.716 212.355 1.00 4.04 N
ATOM 17 C5 G A1232 -31.861 169.088 213.314 1.00 4.04 C
ATOM 18 C6 G A1232 -32.125 170.319 214.019 1.00 4.04 C
ATOM 19 O6 G A1232 -31.572 171.427 213.978 1.00 4.04 O
ATOM 20 N1 G A1232 -33.191 170.222 214.879 1.00 4.04 N
ATOM 21 C2 G A1232 -33.917 169.099 215.054 1.00 4.04 C
ATOM 22 N2 G A1232 -34.900 169.193 215.948 1.00 4.04 N
ATOM 23 N3 G A1232 -33.698 167.961 214.429 1.00 4.04 N
ATOM 24 C4 G A1232 -32.661 168.017 213.583 1.00 4.04 C
ATOM 25 P U A1233 -35.076 165.562 208.560 1.00 16.58 P
ATOM 26 OP1 U A1233 -35.868 164.652 207.670 1.00 16.58 O
ATOM 27 OP2 U A1233 -33.986 166.399 207.970 1.00 16.58 O
ATOM 28 O5' U A1233 -36.054 166.473 209.389 1.00 16.58 O
TER
ATOM 1 O3' A B1230 -23.292 164.565 212.555 1.00 10.72 O
ATOM 2 P G B1231 -22.886 165.147 211.125 1.00 16.28 P
ATOM 3 OP1 G B1231 -22.296 164.028 210.343 1.00 16.28 O
ATOM 4 OP2 G B1231 -22.066 166.383 211.368 1.00 16.28 O
ATOM 5 O5' G B1231 -24.307 165.558 210.528 1.00 16.28 O
ATOM 6 C5' G B1231 -25.185 164.591 210.006 1.00 16.28 C
ATOM 7 C4' G B1231 -26.293 164.213 210.972 1.00 16.28 C
ATOM 8 O4' G B1231 -25.967 164.529 212.343 1.00 16.28 O
ATOM 9 C3' G B1231 -27.614 164.907 210.794 1.00 16.28 C
ATOM 10 O3' G B1231 -28.280 164.509 209.640 1.00 16.28 O
ATOM 11 C2' G B1231 -28.328 164.510 212.069 1.00 16.28 C
ATOM 12 O2' G B1231 -28.718 163.154 212.025 1.00 16.28 O
ATOM 13 C1' G B1231 -27.193 164.651 213.076 1.00 16.28 C
ATOM 14 N9 G B1231 -27.252 165.966 213.727 1.00 16.08 N
ATOM 15 C8 G B1231 -26.332 166.979 213.721 1.00 16.08 C
ATOM 16 N7 G B1231 -26.756 168.034 214.369 1.00 16.08 N
ATOM 17 C5 G B1231 -28.031 167.709 214.806 1.00 16.08 C
ATOM 18 C6 G B1231 -28.955 168.479 215.554 1.00 16.08 C
ATOM 19 O6 G B1231 -28.822 169.631 215.992 1.00 16.08 O
ATOM 20 N1 G B1231 -30.120 167.753 215.768 1.00 16.08 N
ATOM 21 C2 G B1231 -30.361 166.479 215.331 1.00 16.08 C
ATOM 22 N2 G B1231 -31.555 165.987 215.662 1.00 16.08 N
ATOM 23 N3 G B1231 -29.509 165.748 214.630 1.00 16.08 N
ATOM 24 C4 G B1231 -28.361 166.429 214.409 1.00 16.08 C
ATOM 25 P G B1232 -29.222 165.535 208.902 1.00 3.80 P
ATOM 26 OP1 G B1232 -29.411 165.042 207.498 1.00 3.80 O
ATOM 27 OP2 G B1232 -28.629 166.862 209.105 1.00 3.80 O
ATOM 28 O5' G B1232 -30.586 165.399 209.728 1.00 3.80 O
TER
Atoms:
OP1: (-29.411,165.042,207.498)
OP2: (-28.629,166.862,209.105)
C3': (-33.451,165.201,210.571)
C1': (-32.799,165.629,212.788)
C5': (-31.184,164.125,209.978)
O6: (-31.572,171.427,213.978)
O4': (-31.853,164.735,212.235)
C8: (-31.167,167.470,212.090)
C2: (-33.917,169.099,215.054)
C6: (-32.125,170.319,214.019)
C5: (-31.861,169.088,213.314)
C4: (-32.661,168.017,213.583)
P: (-29.222,165.535,208.902)
C4': (-32.336,164.231,210.954)
C2': (-34.044,165.584,211.911)
O2': (-34.907,164.572,212.386)
N1: (-33.191,170.222,214.879)
N2: (-34.900,169.193,215.948)
N3: (-33.698,167.961,214.429)
N7: (-30.915,168.716,212.355)
N9: (-32.210,166.981,212.817)
O5': (-30.586,165.399,209.728)
O3': (-34.396,164.646,209.691)
OP2: (-28.629,166.862,209.105)
C3': (-33.451,165.201,210.571)
C1': (-32.799,165.629,212.788)
C5': (-31.184,164.125,209.978)
O6: (-31.572,171.427,213.978)
O4': (-31.853,164.735,212.235)
C8: (-31.167,167.470,212.090)
C2: (-33.917,169.099,215.054)
C6: (-32.125,170.319,214.019)
C5: (-31.861,169.088,213.314)
C4: (-32.661,168.017,213.583)
P: (-29.222,165.535,208.902)
C4': (-32.336,164.231,210.954)
C2': (-34.044,165.584,211.911)
O2': (-34.907,164.572,212.386)
N1: (-33.191,170.222,214.879)
N2: (-34.900,169.193,215.948)
N3: (-33.698,167.961,214.429)
N7: (-30.915,168.716,212.355)
N9: (-32.210,166.981,212.817)
O5': (-30.586,165.399,209.728)
O3': (-34.396,164.646,209.691)
OP1: (-22.296,164.028,210.343)
OP2: (-22.066,166.383,211.368)
C3': (-27.614,164.907,210.794)
C1': (-27.193,164.651,213.076)
C5': (-25.185,164.591,210.006)
O6: (-28.822,169.631,215.992)
O4': (-25.967,164.529,212.343)
C8: (-26.332,166.979,213.721)
C2: (-30.361,166.479,215.331)
C6: (-28.955,168.479,215.554)
C5: (-28.031,167.709,214.806)
C4: (-28.361,166.429,214.409)
P: (-22.886,165.147,211.125)
C4': (-26.293,164.213,210.972)
C2': (-28.328,164.510,212.069)
O2': (-28.718,163.154,212.025)
N1: (-30.120,167.753,215.768)
N2: (-31.555,165.987,215.662)
N3: (-29.509,165.748,214.630)
N7: (-26.756,168.034,214.369)
N9: (-27.252,165.966,213.727)
O5': (-24.307,165.558,210.528)
O3': (-28.280,164.509,209.640)
OP2: (-22.066,166.383,211.368)
C3': (-27.614,164.907,210.794)
C1': (-27.193,164.651,213.076)
C5': (-25.185,164.591,210.006)
O6: (-28.822,169.631,215.992)
O4': (-25.967,164.529,212.343)
C8: (-26.332,166.979,213.721)
C2: (-30.361,166.479,215.331)
C6: (-28.955,168.479,215.554)
C5: (-28.031,167.709,214.806)
C4: (-28.361,166.429,214.409)
P: (-22.886,165.147,211.125)
C4': (-26.293,164.213,210.972)
C2': (-28.328,164.510,212.069)
O2': (-28.718,163.154,212.025)
N1: (-30.120,167.753,215.768)
N2: (-31.555,165.987,215.662)
N3: (-29.509,165.748,214.630)
N7: (-26.756,168.034,214.369)
N9: (-27.252,165.966,213.727)
O5': (-24.307,165.558,210.528)
O3': (-28.280,164.509,209.640)
Image (generated by PyMOL):