Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIQ:A55:A54
Extra
PDB:
ATOM 1 O3' G A 54 -6.386 55.879 10.985 1.00 46.47 O
ATOM 2 P G A 55 -5.326 56.379 12.081 1.00 46.26 P
ATOM 3 OP1 G A 55 -4.890 55.200 12.859 1.00 46.48 O
ATOM 4 OP2 G A 55 -5.881 57.548 12.800 1.00 45.91 O
ATOM 5 O5' G A 55 -4.111 56.862 11.161 1.00 46.23 O
ATOM 6 C5' G A 55 -3.468 55.918 10.312 1.00 47.20 C
ATOM 7 C4' G A 55 -2.638 56.607 9.248 1.00 48.38 C
ATOM 8 O4' G A 55 -3.470 57.455 8.415 1.00 48.64 O
ATOM 9 C3' G A 55 -1.577 57.565 9.766 1.00 49.06 C
ATOM 10 O3' G A 55 -0.442 56.868 10.265 1.00 49.91 O
ATOM 11 C2' G A 55 -1.307 58.360 8.492 1.00 49.11 C
ATOM 12 O2' G A 55 -0.622 57.619 7.499 1.00 49.03 O
ATOM 13 C1' G A 55 -2.747 58.622 8.054 1.00 48.84 C
ATOM 14 N9 G A 55 -3.359 59.796 8.692 1.00 48.73 N
ATOM 15 C8 G A 55 -4.380 59.789 9.615 1.00 48.74 C
ATOM 16 N7 G A 55 -4.731 60.974 10.026 1.00 48.81 N
ATOM 17 C5 G A 55 -3.888 61.835 9.334 1.00 48.79 C
ATOM 18 C6 G A 55 -3.806 63.253 9.371 1.00 48.74 C
ATOM 19 O6 G A 55 -4.486 64.042 10.046 1.00 48.52 O
ATOM 20 N1 G A 55 -2.813 63.742 8.515 1.00 48.62 N
ATOM 21 C2 G A 55 -2.003 62.955 7.724 1.00 48.40 C
ATOM 22 N2 G A 55 -1.106 63.601 6.968 1.00 48.31 N
ATOM 23 N3 G A 55 -2.073 61.626 7.680 1.00 48.51 N
ATOM 24 C4 G A 55 -3.034 61.128 8.507 1.00 48.68 C
ATOM 25 P G A 56 0.292 57.363 11.603 1.00 50.43 P
ATOM 26 OP1 G A 56 1.273 56.317 11.976 1.00 50.61 O
ATOM 27 OP2 G A 56 -0.719 57.788 12.597 1.00 49.63 O
ATOM 28 O5' G A 56 1.085 58.650 11.080 1.00 51.43 O
TER
ATOM 1 O3' G B 53 -12.086 57.435 12.029 1.00 46.71 O
ATOM 2 P G B 54 -10.741 57.730 12.856 1.00 46.12 P
ATOM 3 OP1 G B 54 -10.646 56.701 13.915 1.00 46.12 O
ATOM 4 OP2 G B 54 -10.701 59.166 13.214 1.00 46.19 O
ATOM 5 O5' G B 54 -9.584 57.466 11.788 1.00 45.97 O
ATOM 6 C5' G B 54 -9.457 56.184 11.191 1.00 45.90 C
ATOM 7 C4' G B 54 -8.558 56.252 9.977 1.00 45.86 C
ATOM 8 O4' G B 54 -9.078 57.175 8.989 1.00 45.99 O
ATOM 9 C3' G B 54 -7.180 56.814 10.255 1.00 46.14 C
ATOM 10 O3' G B 54 -6.386 55.879 10.985 1.00 46.47 O
ATOM 11 C2' G B 54 -6.724 57.091 8.822 1.00 46.20 C
ATOM 12 O2' G B 54 -6.368 55.944 8.071 1.00 46.10 O
ATOM 13 C1' G B 54 -7.995 57.720 8.249 1.00 46.12 C
ATOM 14 N9 G B 54 -7.986 59.184 8.339 1.00 45.89 N
ATOM 15 C8 G B 54 -8.776 59.982 9.133 1.00 45.81 C
ATOM 16 N7 G B 54 -8.533 61.258 9.007 1.00 45.73 N
ATOM 17 C5 G B 54 -7.512 61.316 8.069 1.00 45.87 C
ATOM 18 C6 G B 54 -6.829 62.434 7.524 1.00 46.05 C
ATOM 19 O6 G B 54 -7.008 63.633 7.780 1.00 46.36 O
ATOM 20 N1 G B 54 -5.854 62.059 6.595 1.00 45.82 N
ATOM 21 C2 G B 54 -5.574 60.757 6.241 1.00 45.60 C
ATOM 22 N2 G B 54 -4.605 60.572 5.336 1.00 45.49 N
ATOM 23 N3 G B 54 -6.207 59.703 6.743 1.00 45.88 N
ATOM 24 C4 G B 54 -7.162 60.049 7.648 1.00 45.91 C
ATOM 25 P G B 55 -5.326 56.379 12.081 1.00 46.26 P
ATOM 26 OP1 G B 55 -4.890 55.200 12.859 1.00 46.48 O
ATOM 27 OP2 G B 55 -5.881 57.548 12.800 1.00 45.91 O
ATOM 28 O5' G B 55 -4.111 56.862 11.161 1.00 46.23 O
TER
ATOM 2 P G A 55 -5.326 56.379 12.081 1.00 46.26 P
ATOM 3 OP1 G A 55 -4.890 55.200 12.859 1.00 46.48 O
ATOM 4 OP2 G A 55 -5.881 57.548 12.800 1.00 45.91 O
ATOM 5 O5' G A 55 -4.111 56.862 11.161 1.00 46.23 O
ATOM 6 C5' G A 55 -3.468 55.918 10.312 1.00 47.20 C
ATOM 7 C4' G A 55 -2.638 56.607 9.248 1.00 48.38 C
ATOM 8 O4' G A 55 -3.470 57.455 8.415 1.00 48.64 O
ATOM 9 C3' G A 55 -1.577 57.565 9.766 1.00 49.06 C
ATOM 10 O3' G A 55 -0.442 56.868 10.265 1.00 49.91 O
ATOM 11 C2' G A 55 -1.307 58.360 8.492 1.00 49.11 C
ATOM 12 O2' G A 55 -0.622 57.619 7.499 1.00 49.03 O
ATOM 13 C1' G A 55 -2.747 58.622 8.054 1.00 48.84 C
ATOM 14 N9 G A 55 -3.359 59.796 8.692 1.00 48.73 N
ATOM 15 C8 G A 55 -4.380 59.789 9.615 1.00 48.74 C
ATOM 16 N7 G A 55 -4.731 60.974 10.026 1.00 48.81 N
ATOM 17 C5 G A 55 -3.888 61.835 9.334 1.00 48.79 C
ATOM 18 C6 G A 55 -3.806 63.253 9.371 1.00 48.74 C
ATOM 19 O6 G A 55 -4.486 64.042 10.046 1.00 48.52 O
ATOM 20 N1 G A 55 -2.813 63.742 8.515 1.00 48.62 N
ATOM 21 C2 G A 55 -2.003 62.955 7.724 1.00 48.40 C
ATOM 22 N2 G A 55 -1.106 63.601 6.968 1.00 48.31 N
ATOM 23 N3 G A 55 -2.073 61.626 7.680 1.00 48.51 N
ATOM 24 C4 G A 55 -3.034 61.128 8.507 1.00 48.68 C
ATOM 25 P G A 56 0.292 57.363 11.603 1.00 50.43 P
ATOM 26 OP1 G A 56 1.273 56.317 11.976 1.00 50.61 O
ATOM 27 OP2 G A 56 -0.719 57.788 12.597 1.00 49.63 O
ATOM 28 O5' G A 56 1.085 58.650 11.080 1.00 51.43 O
TER
ATOM 1 O3' G B 53 -12.086 57.435 12.029 1.00 46.71 O
ATOM 2 P G B 54 -10.741 57.730 12.856 1.00 46.12 P
ATOM 3 OP1 G B 54 -10.646 56.701 13.915 1.00 46.12 O
ATOM 4 OP2 G B 54 -10.701 59.166 13.214 1.00 46.19 O
ATOM 5 O5' G B 54 -9.584 57.466 11.788 1.00 45.97 O
ATOM 6 C5' G B 54 -9.457 56.184 11.191 1.00 45.90 C
ATOM 7 C4' G B 54 -8.558 56.252 9.977 1.00 45.86 C
ATOM 8 O4' G B 54 -9.078 57.175 8.989 1.00 45.99 O
ATOM 9 C3' G B 54 -7.180 56.814 10.255 1.00 46.14 C
ATOM 10 O3' G B 54 -6.386 55.879 10.985 1.00 46.47 O
ATOM 11 C2' G B 54 -6.724 57.091 8.822 1.00 46.20 C
ATOM 12 O2' G B 54 -6.368 55.944 8.071 1.00 46.10 O
ATOM 13 C1' G B 54 -7.995 57.720 8.249 1.00 46.12 C
ATOM 14 N9 G B 54 -7.986 59.184 8.339 1.00 45.89 N
ATOM 15 C8 G B 54 -8.776 59.982 9.133 1.00 45.81 C
ATOM 16 N7 G B 54 -8.533 61.258 9.007 1.00 45.73 N
ATOM 17 C5 G B 54 -7.512 61.316 8.069 1.00 45.87 C
ATOM 18 C6 G B 54 -6.829 62.434 7.524 1.00 46.05 C
ATOM 19 O6 G B 54 -7.008 63.633 7.780 1.00 46.36 O
ATOM 20 N1 G B 54 -5.854 62.059 6.595 1.00 45.82 N
ATOM 21 C2 G B 54 -5.574 60.757 6.241 1.00 45.60 C
ATOM 22 N2 G B 54 -4.605 60.572 5.336 1.00 45.49 N
ATOM 23 N3 G B 54 -6.207 59.703 6.743 1.00 45.88 N
ATOM 24 C4 G B 54 -7.162 60.049 7.648 1.00 45.91 C
ATOM 25 P G B 55 -5.326 56.379 12.081 1.00 46.26 P
ATOM 26 OP1 G B 55 -4.890 55.200 12.859 1.00 46.48 O
ATOM 27 OP2 G B 55 -5.881 57.548 12.800 1.00 45.91 O
ATOM 28 O5' G B 55 -4.111 56.862 11.161 1.00 46.23 O
TER
Atoms:
OP1: (-4.890,55.200,12.859)
OP2: (-5.881,57.548,12.800)
C3': (-1.577,57.565,9.766)
C1': (-2.747,58.622,8.054)
C5': (-3.468,55.918,10.312)
O6: (-4.486,64.042,10.046)
O4': (-3.470,57.455,8.415)
C8: (-4.380,59.789,9.615)
C2: (-2.003,62.955,7.724)
C6: (-3.806,63.253,9.371)
C5: (-3.888,61.835,9.334)
C4: (-3.034,61.128,8.507)
P: (-5.326,56.379,12.081)
C4': (-2.638,56.607,9.248)
C2': (-1.307,58.360,8.492)
O2': (-0.622,57.619,7.499)
N1: (-2.813,63.742,8.515)
N2: (-1.106,63.601,6.968)
N3: (-2.073,61.626,7.680)
N7: (-4.731,60.974,10.026)
N9: (-3.359,59.796,8.692)
O5': (-4.111,56.862,11.161)
O3': (-0.442,56.868,10.265)
OP2: (-5.881,57.548,12.800)
C3': (-1.577,57.565,9.766)
C1': (-2.747,58.622,8.054)
C5': (-3.468,55.918,10.312)
O6: (-4.486,64.042,10.046)
O4': (-3.470,57.455,8.415)
C8: (-4.380,59.789,9.615)
C2: (-2.003,62.955,7.724)
C6: (-3.806,63.253,9.371)
C5: (-3.888,61.835,9.334)
C4: (-3.034,61.128,8.507)
P: (-5.326,56.379,12.081)
C4': (-2.638,56.607,9.248)
C2': (-1.307,58.360,8.492)
O2': (-0.622,57.619,7.499)
N1: (-2.813,63.742,8.515)
N2: (-1.106,63.601,6.968)
N3: (-2.073,61.626,7.680)
N7: (-4.731,60.974,10.026)
N9: (-3.359,59.796,8.692)
O5': (-4.111,56.862,11.161)
O3': (-0.442,56.868,10.265)
OP1: (-10.646,56.701,13.915)
OP2: (-10.701,59.166,13.214)
C3': (-7.180,56.814,10.255)
C1': (-7.995,57.720,8.249)
C5': (-9.457,56.184,11.191)
O6: (-7.008,63.633,7.780)
O4': (-9.078,57.175,8.989)
C8: (-8.776,59.982,9.133)
C2: (-5.574,60.757,6.241)
C6: (-6.829,62.434,7.524)
C5: (-7.512,61.316,8.069)
C4: (-7.162,60.049,7.648)
P: (-10.741,57.730,12.856)
C4': (-8.558,56.252,9.977)
C2': (-6.724,57.091,8.822)
O2': (-6.368,55.944,8.071)
N1: (-5.854,62.059,6.595)
N2: (-4.605,60.572,5.336)
N3: (-6.207,59.703,6.743)
N7: (-8.533,61.258,9.007)
N9: (-7.986,59.184,8.339)
O5': (-9.584,57.466,11.788)
O3': (-6.386,55.879,10.985)
OP2: (-10.701,59.166,13.214)
C3': (-7.180,56.814,10.255)
C1': (-7.995,57.720,8.249)
C5': (-9.457,56.184,11.191)
O6: (-7.008,63.633,7.780)
O4': (-9.078,57.175,8.989)
C8: (-8.776,59.982,9.133)
C2: (-5.574,60.757,6.241)
C6: (-6.829,62.434,7.524)
C5: (-7.512,61.316,8.069)
C4: (-7.162,60.049,7.648)
P: (-10.741,57.730,12.856)
C4': (-8.558,56.252,9.977)
C2': (-6.724,57.091,8.822)
O2': (-6.368,55.944,8.071)
N1: (-5.854,62.059,6.595)
N2: (-4.605,60.572,5.336)
N3: (-6.207,59.703,6.743)
N7: (-8.533,61.258,9.007)
N9: (-7.986,59.184,8.339)
O5': (-9.584,57.466,11.788)
O3': (-6.386,55.879,10.985)
Image (generated by PyMOL):