Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VC6:B23:B21
Extra
PDB:
ATOM 1 O3' U A 22 40.808 83.466 86.578 1.00117.88 O
ATOM 2 P C A 23 39.207 83.549 86.838 1.00119.52 P
ATOM 3 OP1 C A 23 38.480 84.585 86.018 1.00119.98 O
ATOM 4 OP2 C A 23 39.013 83.535 88.291 1.00120.54 O
ATOM 5 O5' C A 23 38.748 82.089 86.398 1.00118.74 O
ATOM 6 C5' C A 23 37.668 81.379 87.064 1.00117.64 C
ATOM 7 C4' C A 23 36.458 82.308 87.329 1.00116.89 C
ATOM 8 O4' C A 23 35.688 82.518 86.113 1.00114.67 O
ATOM 9 C3' C A 23 35.424 81.862 88.387 1.00117.91 C
ATOM 10 O3' C A 23 34.906 82.987 89.132 1.00121.92 O
ATOM 11 C2' C A 23 34.281 81.256 87.564 1.00115.75 C
ATOM 12 O2' C A 23 32.985 81.302 88.163 1.00115.46 O
ATOM 13 C1' C A 23 34.335 82.099 86.294 1.00113.74 C
ATOM 14 N1 C A 23 33.948 81.349 85.085 1.00110.78 N
ATOM 15 C2 C A 23 32.617 80.908 84.916 1.00109.32 C
ATOM 16 O2 C A 23 31.785 81.131 85.802 1.00108.30 O
ATOM 17 N3 C A 23 32.283 80.248 83.785 1.00108.45 N
ATOM 18 C4 C A 23 33.208 80.018 82.848 1.00108.14 C
ATOM 19 N4 C A 23 32.826 79.372 81.745 1.00107.60 N
ATOM 20 C5 C A 23 34.563 80.442 83.000 1.00107.77 C
ATOM 21 C6 C A 23 34.884 81.094 84.122 1.00109.00 C
ATOM 22 P G A 24 35.368 83.228 90.663 1.00124.50 P
ATOM 23 OP1 G A 24 36.829 82.981 90.729 1.00123.87 O
ATOM 24 OP2 G A 24 34.452 82.464 91.548 1.00124.69 O
ATOM 25 O5' G A 24 35.118 84.779 90.942 1.00126.88 O
TER
ATOM 1 O3' C B 20 36.572 77.158 79.185 1.00 75.77 O
ATOM 2 P C B 21 36.850 78.672 79.618 1.00 77.11 P
ATOM 3 OP1 C B 21 36.099 78.930 80.866 1.00 76.03 O
ATOM 4 OP2 C B 21 36.662 79.550 78.444 1.00 76.57 O
ATOM 5 O5' C B 21 38.392 78.682 79.955 1.00 79.00 O
ATOM 6 C5' C B 21 39.124 79.844 79.773 1.00 83.73 C
ATOM 7 C4' C B 21 40.563 79.508 79.640 1.00 86.45 C
ATOM 8 O4' C B 21 40.724 78.526 78.599 1.00 85.27 O
ATOM 9 C3' C B 21 41.381 80.696 79.196 1.00 89.71 C
ATOM 10 O3' C B 21 41.724 81.381 80.407 1.00 95.84 O
ATOM 11 C2' C B 21 42.548 80.054 78.417 1.00 87.96 C
ATOM 12 O2' C B 21 43.622 79.540 79.184 1.00 91.29 O
ATOM 13 C1' C B 21 41.891 78.792 77.851 1.00 84.74 C
ATOM 14 N1 C B 21 41.588 78.633 76.406 1.00 81.72 N
ATOM 15 C2 C B 21 42.642 78.555 75.488 1.00 81.36 C
ATOM 16 O2 C B 21 43.789 78.523 75.902 1.00 82.80 O
ATOM 17 N3 C B 21 42.375 78.498 74.159 1.00 79.98 N
ATOM 18 C4 C B 21 41.127 78.513 73.727 1.00 79.32 C
ATOM 19 N4 C B 21 40.932 78.524 72.411 1.00 78.45 N
ATOM 20 C5 C B 21 40.024 78.532 74.630 1.00 79.98 C
ATOM 21 C6 C B 21 40.298 78.577 75.956 1.00 80.58 C
ATOM 22 P U B 22 41.016 82.842 80.796 1.00101.73 P
ATOM 23 OP1 U B 22 39.922 83.448 79.885 1.00100.20 O
ATOM 24 OP2 U B 22 42.167 83.746 81.151 1.00102.76 O
ATOM 25 O5' U B 22 40.378 82.580 82.247 1.00105.48 O
TER
ATOM 2 P C A 23 39.207 83.549 86.838 1.00119.52 P
ATOM 3 OP1 C A 23 38.480 84.585 86.018 1.00119.98 O
ATOM 4 OP2 C A 23 39.013 83.535 88.291 1.00120.54 O
ATOM 5 O5' C A 23 38.748 82.089 86.398 1.00118.74 O
ATOM 6 C5' C A 23 37.668 81.379 87.064 1.00117.64 C
ATOM 7 C4' C A 23 36.458 82.308 87.329 1.00116.89 C
ATOM 8 O4' C A 23 35.688 82.518 86.113 1.00114.67 O
ATOM 9 C3' C A 23 35.424 81.862 88.387 1.00117.91 C
ATOM 10 O3' C A 23 34.906 82.987 89.132 1.00121.92 O
ATOM 11 C2' C A 23 34.281 81.256 87.564 1.00115.75 C
ATOM 12 O2' C A 23 32.985 81.302 88.163 1.00115.46 O
ATOM 13 C1' C A 23 34.335 82.099 86.294 1.00113.74 C
ATOM 14 N1 C A 23 33.948 81.349 85.085 1.00110.78 N
ATOM 15 C2 C A 23 32.617 80.908 84.916 1.00109.32 C
ATOM 16 O2 C A 23 31.785 81.131 85.802 1.00108.30 O
ATOM 17 N3 C A 23 32.283 80.248 83.785 1.00108.45 N
ATOM 18 C4 C A 23 33.208 80.018 82.848 1.00108.14 C
ATOM 19 N4 C A 23 32.826 79.372 81.745 1.00107.60 N
ATOM 20 C5 C A 23 34.563 80.442 83.000 1.00107.77 C
ATOM 21 C6 C A 23 34.884 81.094 84.122 1.00109.00 C
ATOM 22 P G A 24 35.368 83.228 90.663 1.00124.50 P
ATOM 23 OP1 G A 24 36.829 82.981 90.729 1.00123.87 O
ATOM 24 OP2 G A 24 34.452 82.464 91.548 1.00124.69 O
ATOM 25 O5' G A 24 35.118 84.779 90.942 1.00126.88 O
TER
ATOM 1 O3' C B 20 36.572 77.158 79.185 1.00 75.77 O
ATOM 2 P C B 21 36.850 78.672 79.618 1.00 77.11 P
ATOM 3 OP1 C B 21 36.099 78.930 80.866 1.00 76.03 O
ATOM 4 OP2 C B 21 36.662 79.550 78.444 1.00 76.57 O
ATOM 5 O5' C B 21 38.392 78.682 79.955 1.00 79.00 O
ATOM 6 C5' C B 21 39.124 79.844 79.773 1.00 83.73 C
ATOM 7 C4' C B 21 40.563 79.508 79.640 1.00 86.45 C
ATOM 8 O4' C B 21 40.724 78.526 78.599 1.00 85.27 O
ATOM 9 C3' C B 21 41.381 80.696 79.196 1.00 89.71 C
ATOM 10 O3' C B 21 41.724 81.381 80.407 1.00 95.84 O
ATOM 11 C2' C B 21 42.548 80.054 78.417 1.00 87.96 C
ATOM 12 O2' C B 21 43.622 79.540 79.184 1.00 91.29 O
ATOM 13 C1' C B 21 41.891 78.792 77.851 1.00 84.74 C
ATOM 14 N1 C B 21 41.588 78.633 76.406 1.00 81.72 N
ATOM 15 C2 C B 21 42.642 78.555 75.488 1.00 81.36 C
ATOM 16 O2 C B 21 43.789 78.523 75.902 1.00 82.80 O
ATOM 17 N3 C B 21 42.375 78.498 74.159 1.00 79.98 N
ATOM 18 C4 C B 21 41.127 78.513 73.727 1.00 79.32 C
ATOM 19 N4 C B 21 40.932 78.524 72.411 1.00 78.45 N
ATOM 20 C5 C B 21 40.024 78.532 74.630 1.00 79.98 C
ATOM 21 C6 C B 21 40.298 78.577 75.956 1.00 80.58 C
ATOM 22 P U B 22 41.016 82.842 80.796 1.00101.73 P
ATOM 23 OP1 U B 22 39.922 83.448 79.885 1.00100.20 O
ATOM 24 OP2 U B 22 42.167 83.746 81.151 1.00102.76 O
ATOM 25 O5' U B 22 40.378 82.580 82.247 1.00105.48 O
TER
Atoms:
C2: (32.617,80.908,84.916)
OP1: (38.480,84.585,86.018)
OP2: (39.013,83.535,88.291)
C4: (33.208,80.018,82.848)
O5': (38.748,82.089,86.398)
C3': (35.424,81.862,88.387)
C1': (34.335,82.099,86.294)
O4': (35.688,82.518,86.113)
C5': (37.668,81.379,87.064)
P: (39.207,83.549,86.838)
O2: (31.785,81.131,85.802)
C4': (36.458,82.308,87.329)
C2': (34.281,81.256,87.564)
O2': (32.985,81.302,88.163)
N1: (33.948,81.349,85.085)
N3: (32.283,80.248,83.785)
N4: (32.826,79.372,81.745)
C6: (34.884,81.094,84.122)
C5: (34.563,80.442,83.000)
O3': (34.906,82.987,89.132)
OP1: (38.480,84.585,86.018)
OP2: (39.013,83.535,88.291)
C4: (33.208,80.018,82.848)
O5': (38.748,82.089,86.398)
C3': (35.424,81.862,88.387)
C1': (34.335,82.099,86.294)
O4': (35.688,82.518,86.113)
C5': (37.668,81.379,87.064)
P: (39.207,83.549,86.838)
O2: (31.785,81.131,85.802)
C4': (36.458,82.308,87.329)
C2': (34.281,81.256,87.564)
O2': (32.985,81.302,88.163)
N1: (33.948,81.349,85.085)
N3: (32.283,80.248,83.785)
N4: (32.826,79.372,81.745)
C6: (34.884,81.094,84.122)
C5: (34.563,80.442,83.000)
O3': (34.906,82.987,89.132)
C2: (42.642,78.555,75.488)
OP1: (36.099,78.930,80.866)
OP2: (36.662,79.550,78.444)
C4: (41.127,78.513,73.727)
O5': (38.392,78.682,79.955)
C3': (41.381,80.696,79.196)
C1': (41.891,78.792,77.851)
O4': (40.724,78.526,78.599)
C5': (39.124,79.844,79.773)
P: (36.850,78.672,79.618)
O2: (43.789,78.523,75.902)
C4': (40.563,79.508,79.640)
C2': (42.548,80.054,78.417)
O2': (43.622,79.540,79.184)
N1: (41.588,78.633,76.406)
N3: (42.375,78.498,74.159)
N4: (40.932,78.524,72.411)
C6: (40.298,78.577,75.956)
C5: (40.024,78.532,74.630)
O3': (41.724,81.381,80.407)
OP1: (36.099,78.930,80.866)
OP2: (36.662,79.550,78.444)
C4: (41.127,78.513,73.727)
O5': (38.392,78.682,79.955)
C3': (41.381,80.696,79.196)
C1': (41.891,78.792,77.851)
O4': (40.724,78.526,78.599)
C5': (39.124,79.844,79.773)
P: (36.850,78.672,79.618)
O2: (43.789,78.523,75.902)
C4': (40.563,79.508,79.640)
C2': (42.548,80.054,78.417)
O2': (43.622,79.540,79.184)
N1: (41.588,78.633,76.406)
N3: (42.375,78.498,74.159)
N4: (40.932,78.524,72.411)
C6: (40.298,78.577,75.956)
C5: (40.024,78.532,74.630)
O3': (41.724,81.381,80.407)
Image (generated by PyMOL):