Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A541:A540
Extra
PDB:
ATOM 1 O3' G A 540 -5.155 120.908 221.934 1.00 78.29 O
ATOM 2 P G A 541 -6.356 119.884 222.155 1.00 84.18 P
ATOM 3 OP1 G A 541 -5.896 118.877 223.137 1.00 89.49 O
ATOM 4 OP2 G A 541 -6.836 119.472 220.816 1.00 83.86 O
ATOM 5 O5' G A 541 -7.501 120.788 222.813 1.00 73.57 O
ATOM 6 C5' G A 541 -7.406 121.196 224.172 1.00 75.39 C
ATOM 7 C4' G A 541 -8.477 122.217 224.529 1.00 81.41 C
ATOM 8 O4' G A 541 -8.398 123.344 223.618 1.00 85.13 O
ATOM 9 C3' G A 541 -9.927 121.760 224.424 1.00 78.51 C
ATOM 10 O3' G A 541 -10.338 121.048 225.601 1.00 69.53 O
ATOM 11 C2' G A 541 -10.640 123.106 224.323 1.00 82.34 C
ATOM 12 O2' G A 541 -10.789 123.744 225.577 1.00 85.44 O
ATOM 13 C1' G A 541 -9.687 123.900 223.441 1.00 81.06 C
ATOM 14 N9 G A 541 -10.052 123.758 222.046 1.00 81.35 N
ATOM 15 C8 G A 541 -9.351 123.077 221.087 1.00 83.02 C
ATOM 16 N7 G A 541 -9.925 123.109 219.918 1.00 90.12 N
ATOM 17 C5 G A 541 -11.080 123.854 220.120 1.00 79.86 C
ATOM 18 C6 G A 541 -12.097 124.216 219.206 1.00 76.43 C
ATOM 19 O6 G A 541 -12.170 123.934 218.002 1.00 81.91 O
ATOM 20 N1 G A 541 -13.092 124.974 219.818 1.00 72.52 N
ATOM 21 C2 G A 541 -13.096 125.329 221.146 1.00 75.39 C
ATOM 22 N2 G A 541 -14.140 126.058 221.556 1.00 81.83 N
ATOM 23 N3 G A 541 -12.148 124.995 222.015 1.00 73.22 N
ATOM 24 C4 G A 541 -11.175 124.259 221.432 1.00 75.92 C
ATOM 25 P G A 542 -11.255 119.728 225.494 1.00 75.60 P
ATOM 26 OP1 G A 542 -11.022 118.937 226.718 1.00 90.49 O
ATOM 27 OP2 G A 542 -11.006 119.103 224.175 1.00 70.78 O
ATOM 28 O5' G A 542 -12.764 120.277 225.504 1.00 69.61 O
TER
ATOM 1 O3' U B 539 -2.654 121.230 216.370 1.00 67.03 O
ATOM 2 P G B 540 -3.668 120.315 217.201 1.00 75.30 P
ATOM 3 OP1 G B 540 -2.869 119.202 217.750 1.00 83.23 O
ATOM 4 OP2 G B 540 -4.850 120.035 216.343 1.00 79.64 O
ATOM 5 O5' G B 540 -4.129 121.260 218.413 1.00 81.29 O
ATOM 6 C5' G B 540 -3.209 121.645 219.434 1.00 80.46 C
ATOM 7 C4' G B 540 -3.909 122.430 220.534 1.00 77.89 C
ATOM 8 O4' G B 540 -4.165 123.789 220.096 1.00 78.58 O
ATOM 9 C3' G B 540 -5.277 121.901 220.937 1.00 81.49 C
ATOM 10 O3' G B 540 -5.155 120.908 221.934 1.00 78.29 O
ATOM 11 C2' G B 540 -5.914 123.136 221.548 1.00 77.67 C
ATOM 12 O2' G B 540 -5.477 123.320 222.878 1.00 74.81 O
ATOM 13 C1' G B 540 -5.390 124.240 220.638 1.00 75.94 C
ATOM 14 N9 G B 540 -6.293 124.512 219.534 1.00 75.84 N
ATOM 15 C8 G B 540 -6.238 123.966 218.276 1.00 84.74 C
ATOM 16 N7 G B 540 -7.186 124.388 217.487 1.00 85.65 N
ATOM 17 C5 G B 540 -7.916 125.267 218.278 1.00 77.73 C
ATOM 18 C6 G B 540 -9.061 126.028 217.963 1.00 75.30 C
ATOM 19 O6 G B 540 -9.665 126.072 216.887 1.00 83.02 O
ATOM 20 N1 G B 540 -9.494 126.789 219.039 1.00 70.48 N
ATOM 21 C2 G B 540 -8.886 126.807 220.266 1.00 81.86 C
ATOM 22 N2 G B 540 -9.446 127.607 221.183 1.00 94.35 N
ATOM 23 N3 G B 540 -7.809 126.098 220.580 1.00 81.49 N
ATOM 24 C4 G B 540 -7.380 125.353 219.540 1.00 75.67 C
ATOM 25 P G B 541 -6.356 119.884 222.155 1.00 84.18 P
ATOM 26 OP1 G B 541 -5.896 118.877 223.137 1.00 89.49 O
ATOM 27 OP2 G B 541 -6.836 119.472 220.816 1.00 83.86 O
ATOM 28 O5' G B 541 -7.501 120.788 222.813 1.00 73.57 O
TER
ATOM 2 P G A 541 -6.356 119.884 222.155 1.00 84.18 P
ATOM 3 OP1 G A 541 -5.896 118.877 223.137 1.00 89.49 O
ATOM 4 OP2 G A 541 -6.836 119.472 220.816 1.00 83.86 O
ATOM 5 O5' G A 541 -7.501 120.788 222.813 1.00 73.57 O
ATOM 6 C5' G A 541 -7.406 121.196 224.172 1.00 75.39 C
ATOM 7 C4' G A 541 -8.477 122.217 224.529 1.00 81.41 C
ATOM 8 O4' G A 541 -8.398 123.344 223.618 1.00 85.13 O
ATOM 9 C3' G A 541 -9.927 121.760 224.424 1.00 78.51 C
ATOM 10 O3' G A 541 -10.338 121.048 225.601 1.00 69.53 O
ATOM 11 C2' G A 541 -10.640 123.106 224.323 1.00 82.34 C
ATOM 12 O2' G A 541 -10.789 123.744 225.577 1.00 85.44 O
ATOM 13 C1' G A 541 -9.687 123.900 223.441 1.00 81.06 C
ATOM 14 N9 G A 541 -10.052 123.758 222.046 1.00 81.35 N
ATOM 15 C8 G A 541 -9.351 123.077 221.087 1.00 83.02 C
ATOM 16 N7 G A 541 -9.925 123.109 219.918 1.00 90.12 N
ATOM 17 C5 G A 541 -11.080 123.854 220.120 1.00 79.86 C
ATOM 18 C6 G A 541 -12.097 124.216 219.206 1.00 76.43 C
ATOM 19 O6 G A 541 -12.170 123.934 218.002 1.00 81.91 O
ATOM 20 N1 G A 541 -13.092 124.974 219.818 1.00 72.52 N
ATOM 21 C2 G A 541 -13.096 125.329 221.146 1.00 75.39 C
ATOM 22 N2 G A 541 -14.140 126.058 221.556 1.00 81.83 N
ATOM 23 N3 G A 541 -12.148 124.995 222.015 1.00 73.22 N
ATOM 24 C4 G A 541 -11.175 124.259 221.432 1.00 75.92 C
ATOM 25 P G A 542 -11.255 119.728 225.494 1.00 75.60 P
ATOM 26 OP1 G A 542 -11.022 118.937 226.718 1.00 90.49 O
ATOM 27 OP2 G A 542 -11.006 119.103 224.175 1.00 70.78 O
ATOM 28 O5' G A 542 -12.764 120.277 225.504 1.00 69.61 O
TER
ATOM 1 O3' U B 539 -2.654 121.230 216.370 1.00 67.03 O
ATOM 2 P G B 540 -3.668 120.315 217.201 1.00 75.30 P
ATOM 3 OP1 G B 540 -2.869 119.202 217.750 1.00 83.23 O
ATOM 4 OP2 G B 540 -4.850 120.035 216.343 1.00 79.64 O
ATOM 5 O5' G B 540 -4.129 121.260 218.413 1.00 81.29 O
ATOM 6 C5' G B 540 -3.209 121.645 219.434 1.00 80.46 C
ATOM 7 C4' G B 540 -3.909 122.430 220.534 1.00 77.89 C
ATOM 8 O4' G B 540 -4.165 123.789 220.096 1.00 78.58 O
ATOM 9 C3' G B 540 -5.277 121.901 220.937 1.00 81.49 C
ATOM 10 O3' G B 540 -5.155 120.908 221.934 1.00 78.29 O
ATOM 11 C2' G B 540 -5.914 123.136 221.548 1.00 77.67 C
ATOM 12 O2' G B 540 -5.477 123.320 222.878 1.00 74.81 O
ATOM 13 C1' G B 540 -5.390 124.240 220.638 1.00 75.94 C
ATOM 14 N9 G B 540 -6.293 124.512 219.534 1.00 75.84 N
ATOM 15 C8 G B 540 -6.238 123.966 218.276 1.00 84.74 C
ATOM 16 N7 G B 540 -7.186 124.388 217.487 1.00 85.65 N
ATOM 17 C5 G B 540 -7.916 125.267 218.278 1.00 77.73 C
ATOM 18 C6 G B 540 -9.061 126.028 217.963 1.00 75.30 C
ATOM 19 O6 G B 540 -9.665 126.072 216.887 1.00 83.02 O
ATOM 20 N1 G B 540 -9.494 126.789 219.039 1.00 70.48 N
ATOM 21 C2 G B 540 -8.886 126.807 220.266 1.00 81.86 C
ATOM 22 N2 G B 540 -9.446 127.607 221.183 1.00 94.35 N
ATOM 23 N3 G B 540 -7.809 126.098 220.580 1.00 81.49 N
ATOM 24 C4 G B 540 -7.380 125.353 219.540 1.00 75.67 C
ATOM 25 P G B 541 -6.356 119.884 222.155 1.00 84.18 P
ATOM 26 OP1 G B 541 -5.896 118.877 223.137 1.00 89.49 O
ATOM 27 OP2 G B 541 -6.836 119.472 220.816 1.00 83.86 O
ATOM 28 O5' G B 541 -7.501 120.788 222.813 1.00 73.57 O
TER
Atoms:
OP1: (-5.896,118.877,223.137)
OP2: (-6.836,119.472,220.816)
C3': (-9.927,121.760,224.424)
C1': (-9.687,123.900,223.441)
C5': (-7.406,121.196,224.172)
O6: (-12.170,123.934,218.002)
O4': (-8.398,123.344,223.618)
C8: (-9.351,123.077,221.087)
C2: (-13.096,125.329,221.146)
C6: (-12.097,124.216,219.206)
C5: (-11.080,123.854,220.120)
C4: (-11.175,124.259,221.432)
P: (-6.356,119.884,222.155)
C4': (-8.477,122.217,224.529)
C2': (-10.640,123.106,224.323)
O2': (-10.789,123.744,225.577)
N1: (-13.092,124.974,219.818)
N2: (-14.140,126.058,221.556)
N3: (-12.148,124.995,222.015)
N7: (-9.925,123.109,219.918)
N9: (-10.052,123.758,222.046)
O5': (-7.501,120.788,222.813)
O3': (-10.338,121.048,225.601)
OP2: (-6.836,119.472,220.816)
C3': (-9.927,121.760,224.424)
C1': (-9.687,123.900,223.441)
C5': (-7.406,121.196,224.172)
O6: (-12.170,123.934,218.002)
O4': (-8.398,123.344,223.618)
C8: (-9.351,123.077,221.087)
C2: (-13.096,125.329,221.146)
C6: (-12.097,124.216,219.206)
C5: (-11.080,123.854,220.120)
C4: (-11.175,124.259,221.432)
P: (-6.356,119.884,222.155)
C4': (-8.477,122.217,224.529)
C2': (-10.640,123.106,224.323)
O2': (-10.789,123.744,225.577)
N1: (-13.092,124.974,219.818)
N2: (-14.140,126.058,221.556)
N3: (-12.148,124.995,222.015)
N7: (-9.925,123.109,219.918)
N9: (-10.052,123.758,222.046)
O5': (-7.501,120.788,222.813)
O3': (-10.338,121.048,225.601)
OP1: (-2.869,119.202,217.750)
OP2: (-4.850,120.035,216.343)
C3': (-5.277,121.901,220.937)
C1': (-5.390,124.240,220.638)
C5': (-3.209,121.645,219.434)
O6: (-9.665,126.072,216.887)
O4': (-4.165,123.789,220.096)
C8: (-6.238,123.966,218.276)
C2: (-8.886,126.807,220.266)
C6: (-9.061,126.028,217.963)
C5: (-7.916,125.267,218.278)
C4: (-7.380,125.353,219.540)
P: (-3.668,120.315,217.201)
C4': (-3.909,122.430,220.534)
C2': (-5.914,123.136,221.548)
O2': (-5.477,123.320,222.878)
N1: (-9.494,126.789,219.039)
N2: (-9.446,127.607,221.183)
N3: (-7.809,126.098,220.580)
N7: (-7.186,124.388,217.487)
N9: (-6.293,124.512,219.534)
O5': (-4.129,121.260,218.413)
O3': (-5.155,120.908,221.934)
OP2: (-4.850,120.035,216.343)
C3': (-5.277,121.901,220.937)
C1': (-5.390,124.240,220.638)
C5': (-3.209,121.645,219.434)
O6: (-9.665,126.072,216.887)
O4': (-4.165,123.789,220.096)
C8: (-6.238,123.966,218.276)
C2: (-8.886,126.807,220.266)
C6: (-9.061,126.028,217.963)
C5: (-7.916,125.267,218.278)
C4: (-7.380,125.353,219.540)
P: (-3.668,120.315,217.201)
C4': (-3.909,122.430,220.534)
C2': (-5.914,123.136,221.548)
O2': (-5.477,123.320,222.878)
N1: (-9.494,126.789,219.039)
N2: (-9.446,127.607,221.183)
N3: (-7.809,126.098,220.580)
N7: (-7.186,124.388,217.487)
N9: (-6.293,124.512,219.534)
O5': (-4.129,121.260,218.413)
O3': (-5.155,120.908,221.934)
Image (generated by PyMOL):