Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y99:B9:B8
Extra
PDB:
ATOM 1 O3' G A 8 4.575 7.061 13.809 1.00 44.72 O
ATOM 2 P G A 9 3.941 6.649 15.225 1.00 45.48 P
ATOM 3 OP1 G A 9 4.926 7.009 16.281 1.00 48.63 O
ATOM 4 OP2 G A 9 3.459 5.246 15.115 1.00 44.53 O
ATOM 5 O5' G A 9 2.669 7.594 15.365 1.00 43.58 O
ATOM 6 C5' G A 9 2.816 9.025 15.415 1.00 40.82 C
ATOM 7 C4' G A 9 1.478 9.673 15.669 1.00 39.33 C
ATOM 8 O4' G A 9 0.602 9.435 14.537 1.00 39.01 O
ATOM 9 C3' G A 9 0.705 9.109 16.846 1.00 38.29 C
ATOM 10 O3' G A 9 1.135 9.665 18.078 1.00 39.47 O
ATOM 11 C2' G A 9 -0.726 9.491 16.510 1.00 38.42 C
ATOM 12 O2' G A 9 -1.013 10.841 16.806 1.00 36.40 O
ATOM 13 C1' G A 9 -0.733 9.295 14.994 1.00 39.12 C
ATOM 14 N9 G A 9 -1.221 7.984 14.587 1.00 37.30 N
ATOM 15 C8 G A 9 -0.530 7.004 13.915 1.00 37.24 C
ATOM 16 N7 G A 9 -1.260 5.954 13.650 1.00 35.87 N
ATOM 17 C5 G A 9 -2.504 6.260 14.186 1.00 33.88 C
ATOM 18 C6 G A 9 -3.711 5.517 14.192 1.00 31.83 C
ATOM 19 O6 G A 9 -3.935 4.404 13.702 1.00 34.99 O
ATOM 20 N1 G A 9 -4.725 6.199 14.851 1.00 31.06 N
ATOM 21 C2 G A 9 -4.598 7.437 15.431 1.00 35.16 C
ATOM 22 N2 G A 9 -5.687 7.924 16.035 1.00 36.56 N
ATOM 23 N3 G A 9 -3.484 8.144 15.422 1.00 35.04 N
ATOM 24 C4 G A 9 -2.487 7.501 14.785 1.00 34.31 C
ATOM 25 P U A 10 1.089 8.766 19.405 1.00 40.80 P
ATOM 26 OP1 U A 10 1.787 9.516 20.479 1.00 40.69 O
ATOM 27 OP2 U A 10 1.560 7.400 19.031 1.00 35.30 O
ATOM 28 O5' U A 10 -0.463 8.677 19.749 1.00 35.56 O
TER
ATOM 1 O3' A B 7 6.204 2.067 11.423 1.00 44.80 O
ATOM 2 P G B 8 4.962 2.582 12.297 1.00 45.86 P
ATOM 3 OP1 G B 8 5.429 2.795 13.694 1.00 48.55 O
ATOM 4 OP2 G B 8 3.838 1.653 12.034 1.00 44.43 O
ATOM 5 O5' G B 8 4.608 4.002 11.665 1.00 45.69 O
ATOM 6 C5' G B 8 5.607 5.031 11.556 1.00 41.37 C
ATOM 7 C4' G B 8 4.943 6.379 11.498 1.00 42.44 C
ATOM 8 O4' G B 8 4.138 6.463 10.294 1.00 41.31 O
ATOM 9 C3' G B 8 3.947 6.635 12.612 1.00 43.52 C
ATOM 10 O3' G B 8 4.575 7.061 13.809 1.00 44.72 O
ATOM 11 C2' G B 8 3.057 7.704 12.003 1.00 43.04 C
ATOM 12 O2' G B 8 3.645 8.988 12.034 1.00 45.49 O
ATOM 13 C1' G B 8 2.961 7.210 10.559 1.00 40.26 C
ATOM 14 N9 G B 8 1.814 6.328 10.388 1.00 39.19 N
ATOM 15 C8 G B 8 1.818 4.964 10.210 1.00 37.73 C
ATOM 16 N7 G B 8 0.617 4.456 10.137 1.00 36.49 N
ATOM 17 C5 G B 8 -0.226 5.553 10.261 1.00 36.52 C
ATOM 18 C6 G B 8 -1.642 5.632 10.259 1.00 38.14 C
ATOM 19 O6 G B 8 -2.470 4.716 10.137 1.00 38.85 O
ATOM 20 N1 G B 8 -2.079 6.944 10.419 1.00 39.78 N
ATOM 21 C2 G B 8 -1.262 8.040 10.553 1.00 39.95 C
ATOM 22 N2 G B 8 -1.871 9.225 10.693 1.00 38.76 N
ATOM 23 N3 G B 8 0.055 7.979 10.550 1.00 39.52 N
ATOM 24 C4 G B 8 0.501 6.714 10.405 1.00 37.71 C
ATOM 25 P G B 9 3.941 6.649 15.225 1.00 45.48 P
ATOM 26 OP1 G B 9 4.926 7.009 16.281 1.00 48.63 O
ATOM 27 OP2 G B 9 3.459 5.246 15.115 1.00 44.53 O
ATOM 28 O5' G B 9 2.669 7.594 15.365 1.00 43.58 O
TER
ATOM 2 P G A 9 3.941 6.649 15.225 1.00 45.48 P
ATOM 3 OP1 G A 9 4.926 7.009 16.281 1.00 48.63 O
ATOM 4 OP2 G A 9 3.459 5.246 15.115 1.00 44.53 O
ATOM 5 O5' G A 9 2.669 7.594 15.365 1.00 43.58 O
ATOM 6 C5' G A 9 2.816 9.025 15.415 1.00 40.82 C
ATOM 7 C4' G A 9 1.478 9.673 15.669 1.00 39.33 C
ATOM 8 O4' G A 9 0.602 9.435 14.537 1.00 39.01 O
ATOM 9 C3' G A 9 0.705 9.109 16.846 1.00 38.29 C
ATOM 10 O3' G A 9 1.135 9.665 18.078 1.00 39.47 O
ATOM 11 C2' G A 9 -0.726 9.491 16.510 1.00 38.42 C
ATOM 12 O2' G A 9 -1.013 10.841 16.806 1.00 36.40 O
ATOM 13 C1' G A 9 -0.733 9.295 14.994 1.00 39.12 C
ATOM 14 N9 G A 9 -1.221 7.984 14.587 1.00 37.30 N
ATOM 15 C8 G A 9 -0.530 7.004 13.915 1.00 37.24 C
ATOM 16 N7 G A 9 -1.260 5.954 13.650 1.00 35.87 N
ATOM 17 C5 G A 9 -2.504 6.260 14.186 1.00 33.88 C
ATOM 18 C6 G A 9 -3.711 5.517 14.192 1.00 31.83 C
ATOM 19 O6 G A 9 -3.935 4.404 13.702 1.00 34.99 O
ATOM 20 N1 G A 9 -4.725 6.199 14.851 1.00 31.06 N
ATOM 21 C2 G A 9 -4.598 7.437 15.431 1.00 35.16 C
ATOM 22 N2 G A 9 -5.687 7.924 16.035 1.00 36.56 N
ATOM 23 N3 G A 9 -3.484 8.144 15.422 1.00 35.04 N
ATOM 24 C4 G A 9 -2.487 7.501 14.785 1.00 34.31 C
ATOM 25 P U A 10 1.089 8.766 19.405 1.00 40.80 P
ATOM 26 OP1 U A 10 1.787 9.516 20.479 1.00 40.69 O
ATOM 27 OP2 U A 10 1.560 7.400 19.031 1.00 35.30 O
ATOM 28 O5' U A 10 -0.463 8.677 19.749 1.00 35.56 O
TER
ATOM 1 O3' A B 7 6.204 2.067 11.423 1.00 44.80 O
ATOM 2 P G B 8 4.962 2.582 12.297 1.00 45.86 P
ATOM 3 OP1 G B 8 5.429 2.795 13.694 1.00 48.55 O
ATOM 4 OP2 G B 8 3.838 1.653 12.034 1.00 44.43 O
ATOM 5 O5' G B 8 4.608 4.002 11.665 1.00 45.69 O
ATOM 6 C5' G B 8 5.607 5.031 11.556 1.00 41.37 C
ATOM 7 C4' G B 8 4.943 6.379 11.498 1.00 42.44 C
ATOM 8 O4' G B 8 4.138 6.463 10.294 1.00 41.31 O
ATOM 9 C3' G B 8 3.947 6.635 12.612 1.00 43.52 C
ATOM 10 O3' G B 8 4.575 7.061 13.809 1.00 44.72 O
ATOM 11 C2' G B 8 3.057 7.704 12.003 1.00 43.04 C
ATOM 12 O2' G B 8 3.645 8.988 12.034 1.00 45.49 O
ATOM 13 C1' G B 8 2.961 7.210 10.559 1.00 40.26 C
ATOM 14 N9 G B 8 1.814 6.328 10.388 1.00 39.19 N
ATOM 15 C8 G B 8 1.818 4.964 10.210 1.00 37.73 C
ATOM 16 N7 G B 8 0.617 4.456 10.137 1.00 36.49 N
ATOM 17 C5 G B 8 -0.226 5.553 10.261 1.00 36.52 C
ATOM 18 C6 G B 8 -1.642 5.632 10.259 1.00 38.14 C
ATOM 19 O6 G B 8 -2.470 4.716 10.137 1.00 38.85 O
ATOM 20 N1 G B 8 -2.079 6.944 10.419 1.00 39.78 N
ATOM 21 C2 G B 8 -1.262 8.040 10.553 1.00 39.95 C
ATOM 22 N2 G B 8 -1.871 9.225 10.693 1.00 38.76 N
ATOM 23 N3 G B 8 0.055 7.979 10.550 1.00 39.52 N
ATOM 24 C4 G B 8 0.501 6.714 10.405 1.00 37.71 C
ATOM 25 P G B 9 3.941 6.649 15.225 1.00 45.48 P
ATOM 26 OP1 G B 9 4.926 7.009 16.281 1.00 48.63 O
ATOM 27 OP2 G B 9 3.459 5.246 15.115 1.00 44.53 O
ATOM 28 O5' G B 9 2.669 7.594 15.365 1.00 43.58 O
TER
Atoms:
OP1: (4.926,7.009,16.281)
OP2: (3.459,5.246,15.115)
C3': (0.705,9.109,16.846)
C1': (-0.733,9.295,14.994)
C5': (2.816,9.025,15.415)
O6: (-3.935,4.404,13.702)
O4': (0.602,9.435,14.537)
C8: (-0.530,7.004,13.915)
C2: (-4.598,7.437,15.431)
C6: (-3.711,5.517,14.192)
C5: (-2.504,6.260,14.186)
C4: (-2.487,7.501,14.785)
P: (3.941,6.649,15.225)
C4': (1.478,9.673,15.669)
C2': (-0.726,9.491,16.510)
O2': (-1.013,10.841,16.806)
N1: (-4.725,6.199,14.851)
N2: (-5.687,7.924,16.035)
N3: (-3.484,8.144,15.422)
N7: (-1.260,5.954,13.650)
N9: (-1.221,7.984,14.587)
O5': (2.669,7.594,15.365)
O3': (1.135,9.665,18.078)
OP2: (3.459,5.246,15.115)
C3': (0.705,9.109,16.846)
C1': (-0.733,9.295,14.994)
C5': (2.816,9.025,15.415)
O6: (-3.935,4.404,13.702)
O4': (0.602,9.435,14.537)
C8: (-0.530,7.004,13.915)
C2: (-4.598,7.437,15.431)
C6: (-3.711,5.517,14.192)
C5: (-2.504,6.260,14.186)
C4: (-2.487,7.501,14.785)
P: (3.941,6.649,15.225)
C4': (1.478,9.673,15.669)
C2': (-0.726,9.491,16.510)
O2': (-1.013,10.841,16.806)
N1: (-4.725,6.199,14.851)
N2: (-5.687,7.924,16.035)
N3: (-3.484,8.144,15.422)
N7: (-1.260,5.954,13.650)
N9: (-1.221,7.984,14.587)
O5': (2.669,7.594,15.365)
O3': (1.135,9.665,18.078)
OP1: (5.429,2.795,13.694)
OP2: (3.838,1.653,12.034)
C3': (3.947,6.635,12.612)
C1': (2.961,7.210,10.559)
C5': (5.607,5.031,11.556)
O6: (-2.470,4.716,10.137)
O4': (4.138,6.463,10.294)
C8: (1.818,4.964,10.210)
C2: (-1.262,8.040,10.553)
C6: (-1.642,5.632,10.259)
C5: (-0.226,5.553,10.261)
C4: (0.501,6.714,10.405)
P: (4.962,2.582,12.297)
C4': (4.943,6.379,11.498)
C2': (3.057,7.704,12.003)
O2': (3.645,8.988,12.034)
N1: (-2.079,6.944,10.419)
N2: (-1.871,9.225,10.693)
N3: (0.055,7.979,10.550)
N7: (0.617,4.456,10.137)
N9: (1.814,6.328,10.388)
O5': (4.608,4.002,11.665)
O3': (4.575,7.061,13.809)
OP2: (3.838,1.653,12.034)
C3': (3.947,6.635,12.612)
C1': (2.961,7.210,10.559)
C5': (5.607,5.031,11.556)
O6: (-2.470,4.716,10.137)
O4': (4.138,6.463,10.294)
C8: (1.818,4.964,10.210)
C2: (-1.262,8.040,10.553)
C6: (-1.642,5.632,10.259)
C5: (-0.226,5.553,10.261)
C4: (0.501,6.714,10.405)
P: (4.962,2.582,12.297)
C4': (4.943,6.379,11.498)
C2': (3.057,7.704,12.003)
O2': (3.645,8.988,12.034)
N1: (-2.079,6.944,10.419)
N2: (-1.871,9.225,10.693)
N3: (0.055,7.979,10.550)
N7: (0.617,4.456,10.137)
N9: (1.814,6.328,10.388)
O5': (4.608,4.002,11.665)
O3': (4.575,7.061,13.809)
Image (generated by PyMOL):