Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:X40:X31
Extra
PDB:
ATOM 1 O3' A A 39 18.995 -55.938 -79.410 1.00 63.01 O
ATOM 2 P G A 40 19.234 -57.063 -80.535 1.00 65.79 P
ATOM 3 OP1 G A 40 20.691 -57.065 -80.842 1.00 66.61 O
ATOM 4 OP2 G A 40 18.269 -56.804 -81.632 1.00 61.67 O
ATOM 5 O5' G A 40 18.836 -58.405 -79.783 1.00 65.72 O
ATOM 6 C5' G A 40 17.626 -58.505 -79.054 1.00 64.58 C
ATOM 7 C4' G A 40 17.791 -59.412 -77.869 1.00 64.91 C
ATOM 8 O4' G A 40 18.214 -60.718 -78.324 1.00 61.30 O
ATOM 9 C3' G A 40 18.853 -58.985 -76.871 1.00 71.04 C
ATOM 10 O3' G A 40 18.350 -58.071 -75.914 1.00 78.22 O
ATOM 11 C2' G A 40 19.322 -60.304 -76.266 1.00 68.29 C
ATOM 12 O2' G A 40 18.444 -60.718 -75.231 1.00 67.96 O
ATOM 13 C1' G A 40 19.165 -61.265 -77.441 1.00 62.29 C
ATOM 14 N9 G A 40 20.425 -61.478 -78.188 1.00 62.88 N
ATOM 15 C8 G A 40 20.588 -61.212 -79.528 1.00 62.32 C
ATOM 16 N7 G A 40 21.772 -61.506 -79.992 1.00 63.23 N
ATOM 17 C5 G A 40 22.442 -62.013 -78.893 1.00 63.67 C
ATOM 18 C6 G A 40 23.769 -62.497 -78.793 1.00 64.14 C
ATOM 19 O6 G A 40 24.634 -62.568 -79.678 1.00 63.58 O
ATOM 20 N1 G A 40 24.056 -62.927 -77.504 1.00 65.76 N
ATOM 21 C2 G A 40 23.182 -62.893 -76.446 1.00 67.29 C
ATOM 22 N2 G A 40 23.660 -63.351 -75.277 1.00 67.40 N
ATOM 23 N3 G A 40 21.937 -62.438 -76.527 1.00 65.83 N
ATOM 24 C4 G A 40 21.629 -62.017 -77.773 1.00 64.85 C
ATOM 25 P U A 41 19.165 -56.737 -75.549 1.00 67.28 P
ATOM 26 OP1 U A 41 18.209 -55.807 -74.906 1.00 67.86 O
ATOM 27 OP2 U A 41 19.871 -56.298 -76.780 1.00 61.92 O
ATOM 28 O5' U A 41 20.221 -57.252 -74.475 1.00 71.94 O
TER
ATOM 1 O3' C B 30 17.154 -65.525 -86.336 1.00 70.31 O
ATOM 2 P G B 31 17.390 -63.939 -86.358 1.00 72.94 P
ATOM 3 OP1 G B 31 16.557 -63.394 -87.451 1.00 72.26 O
ATOM 4 OP2 G B 31 18.850 -63.712 -86.394 1.00 72.93 O
ATOM 5 O5' G B 31 16.810 -63.478 -84.954 1.00 77.61 O
ATOM 6 C5' G B 31 15.556 -63.960 -84.487 1.00 78.28 C
ATOM 7 C4' G B 31 15.368 -63.673 -83.020 1.00 79.24 C
ATOM 8 O4' G B 31 16.449 -64.297 -82.277 1.00 74.57 O
ATOM 9 C3' G B 31 15.403 -62.198 -82.645 1.00 78.88 C
ATOM 10 O3' G B 31 14.615 -61.996 -81.474 1.00 77.93 O
ATOM 11 C2' G B 31 16.871 -61.989 -82.308 1.00 72.89 C
ATOM 12 O2' G B 31 17.129 -60.869 -81.490 1.00 67.77 O
ATOM 13 C1' G B 31 17.196 -63.303 -81.600 1.00 67.40 C
ATOM 14 N9 G B 31 18.607 -63.689 -81.649 1.00 62.91 N
ATOM 15 C8 G B 31 19.443 -63.751 -82.735 1.00 68.59 C
ATOM 16 N7 G B 31 20.647 -64.165 -82.432 1.00 64.47 N
ATOM 17 C5 G B 31 20.599 -64.402 -81.067 1.00 55.35 C
ATOM 18 C6 G B 31 21.605 -64.867 -80.174 1.00 49.57 C
ATOM 19 O6 G B 31 22.790 -65.175 -80.417 1.00 50.83 O
ATOM 20 N1 G B 31 21.112 -64.959 -78.871 1.00 44.43 N
ATOM 21 C2 G B 31 19.822 -64.642 -78.482 1.00 45.67 C
ATOM 22 N2 G B 31 19.531 -64.796 -77.174 1.00 42.68 N
ATOM 23 N3 G B 31 18.879 -64.208 -79.311 1.00 49.63 N
ATOM 24 C4 G B 31 19.342 -64.115 -80.575 1.00 55.12 C
ATOM 25 P G B 32 13.686 -60.692 -81.334 1.00 54.87 P
ATOM 26 OP1 G B 32 14.338 -59.792 -80.345 1.00 62.87 O
ATOM 27 OP2 G B 32 13.434 -60.181 -82.708 1.00 64.12 O
ATOM 28 O5' G B 32 12.337 -61.281 -80.720 1.00 54.93 O
TER
ATOM 2 P G A 40 19.234 -57.063 -80.535 1.00 65.79 P
ATOM 3 OP1 G A 40 20.691 -57.065 -80.842 1.00 66.61 O
ATOM 4 OP2 G A 40 18.269 -56.804 -81.632 1.00 61.67 O
ATOM 5 O5' G A 40 18.836 -58.405 -79.783 1.00 65.72 O
ATOM 6 C5' G A 40 17.626 -58.505 -79.054 1.00 64.58 C
ATOM 7 C4' G A 40 17.791 -59.412 -77.869 1.00 64.91 C
ATOM 8 O4' G A 40 18.214 -60.718 -78.324 1.00 61.30 O
ATOM 9 C3' G A 40 18.853 -58.985 -76.871 1.00 71.04 C
ATOM 10 O3' G A 40 18.350 -58.071 -75.914 1.00 78.22 O
ATOM 11 C2' G A 40 19.322 -60.304 -76.266 1.00 68.29 C
ATOM 12 O2' G A 40 18.444 -60.718 -75.231 1.00 67.96 O
ATOM 13 C1' G A 40 19.165 -61.265 -77.441 1.00 62.29 C
ATOM 14 N9 G A 40 20.425 -61.478 -78.188 1.00 62.88 N
ATOM 15 C8 G A 40 20.588 -61.212 -79.528 1.00 62.32 C
ATOM 16 N7 G A 40 21.772 -61.506 -79.992 1.00 63.23 N
ATOM 17 C5 G A 40 22.442 -62.013 -78.893 1.00 63.67 C
ATOM 18 C6 G A 40 23.769 -62.497 -78.793 1.00 64.14 C
ATOM 19 O6 G A 40 24.634 -62.568 -79.678 1.00 63.58 O
ATOM 20 N1 G A 40 24.056 -62.927 -77.504 1.00 65.76 N
ATOM 21 C2 G A 40 23.182 -62.893 -76.446 1.00 67.29 C
ATOM 22 N2 G A 40 23.660 -63.351 -75.277 1.00 67.40 N
ATOM 23 N3 G A 40 21.937 -62.438 -76.527 1.00 65.83 N
ATOM 24 C4 G A 40 21.629 -62.017 -77.773 1.00 64.85 C
ATOM 25 P U A 41 19.165 -56.737 -75.549 1.00 67.28 P
ATOM 26 OP1 U A 41 18.209 -55.807 -74.906 1.00 67.86 O
ATOM 27 OP2 U A 41 19.871 -56.298 -76.780 1.00 61.92 O
ATOM 28 O5' U A 41 20.221 -57.252 -74.475 1.00 71.94 O
TER
ATOM 1 O3' C B 30 17.154 -65.525 -86.336 1.00 70.31 O
ATOM 2 P G B 31 17.390 -63.939 -86.358 1.00 72.94 P
ATOM 3 OP1 G B 31 16.557 -63.394 -87.451 1.00 72.26 O
ATOM 4 OP2 G B 31 18.850 -63.712 -86.394 1.00 72.93 O
ATOM 5 O5' G B 31 16.810 -63.478 -84.954 1.00 77.61 O
ATOM 6 C5' G B 31 15.556 -63.960 -84.487 1.00 78.28 C
ATOM 7 C4' G B 31 15.368 -63.673 -83.020 1.00 79.24 C
ATOM 8 O4' G B 31 16.449 -64.297 -82.277 1.00 74.57 O
ATOM 9 C3' G B 31 15.403 -62.198 -82.645 1.00 78.88 C
ATOM 10 O3' G B 31 14.615 -61.996 -81.474 1.00 77.93 O
ATOM 11 C2' G B 31 16.871 -61.989 -82.308 1.00 72.89 C
ATOM 12 O2' G B 31 17.129 -60.869 -81.490 1.00 67.77 O
ATOM 13 C1' G B 31 17.196 -63.303 -81.600 1.00 67.40 C
ATOM 14 N9 G B 31 18.607 -63.689 -81.649 1.00 62.91 N
ATOM 15 C8 G B 31 19.443 -63.751 -82.735 1.00 68.59 C
ATOM 16 N7 G B 31 20.647 -64.165 -82.432 1.00 64.47 N
ATOM 17 C5 G B 31 20.599 -64.402 -81.067 1.00 55.35 C
ATOM 18 C6 G B 31 21.605 -64.867 -80.174 1.00 49.57 C
ATOM 19 O6 G B 31 22.790 -65.175 -80.417 1.00 50.83 O
ATOM 20 N1 G B 31 21.112 -64.959 -78.871 1.00 44.43 N
ATOM 21 C2 G B 31 19.822 -64.642 -78.482 1.00 45.67 C
ATOM 22 N2 G B 31 19.531 -64.796 -77.174 1.00 42.68 N
ATOM 23 N3 G B 31 18.879 -64.208 -79.311 1.00 49.63 N
ATOM 24 C4 G B 31 19.342 -64.115 -80.575 1.00 55.12 C
ATOM 25 P G B 32 13.686 -60.692 -81.334 1.00 54.87 P
ATOM 26 OP1 G B 32 14.338 -59.792 -80.345 1.00 62.87 O
ATOM 27 OP2 G B 32 13.434 -60.181 -82.708 1.00 64.12 O
ATOM 28 O5' G B 32 12.337 -61.281 -80.720 1.00 54.93 O
TER
Atoms:
OP1: (20.691,-57.065,-80.842)
OP2: (18.269,-56.804,-81.632)
C3': (18.853,-58.985,-76.871)
C1': (19.165,-61.265,-77.441)
C5': (17.626,-58.505,-79.054)
O6: (24.634,-62.568,-79.678)
O4': (18.214,-60.718,-78.324)
C8: (20.588,-61.212,-79.528)
C2: (23.182,-62.893,-76.446)
C6: (23.769,-62.497,-78.793)
C5: (22.442,-62.013,-78.893)
C4: (21.629,-62.017,-77.773)
P: (19.234,-57.063,-80.535)
C4': (17.791,-59.412,-77.869)
C2': (19.322,-60.304,-76.266)
O2': (18.444,-60.718,-75.231)
N1: (24.056,-62.927,-77.504)
N2: (23.660,-63.351,-75.277)
N3: (21.937,-62.438,-76.527)
N7: (21.772,-61.506,-79.992)
N9: (20.425,-61.478,-78.188)
O5': (18.836,-58.405,-79.783)
O3': (18.350,-58.071,-75.914)
OP2: (18.269,-56.804,-81.632)
C3': (18.853,-58.985,-76.871)
C1': (19.165,-61.265,-77.441)
C5': (17.626,-58.505,-79.054)
O6: (24.634,-62.568,-79.678)
O4': (18.214,-60.718,-78.324)
C8: (20.588,-61.212,-79.528)
C2: (23.182,-62.893,-76.446)
C6: (23.769,-62.497,-78.793)
C5: (22.442,-62.013,-78.893)
C4: (21.629,-62.017,-77.773)
P: (19.234,-57.063,-80.535)
C4': (17.791,-59.412,-77.869)
C2': (19.322,-60.304,-76.266)
O2': (18.444,-60.718,-75.231)
N1: (24.056,-62.927,-77.504)
N2: (23.660,-63.351,-75.277)
N3: (21.937,-62.438,-76.527)
N7: (21.772,-61.506,-79.992)
N9: (20.425,-61.478,-78.188)
O5': (18.836,-58.405,-79.783)
O3': (18.350,-58.071,-75.914)
OP1: (16.557,-63.394,-87.451)
OP2: (18.850,-63.712,-86.394)
C3': (15.403,-62.198,-82.645)
C1': (17.196,-63.303,-81.600)
C5': (15.556,-63.960,-84.487)
O6: (22.790,-65.175,-80.417)
O4': (16.449,-64.297,-82.277)
C8: (19.443,-63.751,-82.735)
C2: (19.822,-64.642,-78.482)
C6: (21.605,-64.867,-80.174)
C5: (20.599,-64.402,-81.067)
C4: (19.342,-64.115,-80.575)
P: (17.390,-63.939,-86.358)
C4': (15.368,-63.673,-83.020)
C2': (16.871,-61.989,-82.308)
O2': (17.129,-60.869,-81.490)
N1: (21.112,-64.959,-78.871)
N2: (19.531,-64.796,-77.174)
N3: (18.879,-64.208,-79.311)
N7: (20.647,-64.165,-82.432)
N9: (18.607,-63.689,-81.649)
O5': (16.810,-63.478,-84.954)
O3': (14.615,-61.996,-81.474)
OP2: (18.850,-63.712,-86.394)
C3': (15.403,-62.198,-82.645)
C1': (17.196,-63.303,-81.600)
C5': (15.556,-63.960,-84.487)
O6: (22.790,-65.175,-80.417)
O4': (16.449,-64.297,-82.277)
C8: (19.443,-63.751,-82.735)
C2: (19.822,-64.642,-78.482)
C6: (21.605,-64.867,-80.174)
C5: (20.599,-64.402,-81.067)
C4: (19.342,-64.115,-80.575)
P: (17.390,-63.939,-86.358)
C4': (15.368,-63.673,-83.020)
C2': (16.871,-61.989,-82.308)
O2': (17.129,-60.869,-81.490)
N1: (21.112,-64.959,-78.871)
N2: (19.531,-64.796,-77.174)
N3: (18.879,-64.208,-79.311)
N7: (20.647,-64.165,-82.432)
N9: (18.607,-63.689,-81.649)
O5': (16.810,-63.478,-84.954)
O3': (14.615,-61.996,-81.474)
Image (generated by PyMOL):