ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIR:A160:A159

Extra

PDB:
ATOM 1 O3' G A 159 42.237 15.173 4.466 1.00 34.96 O
ATOM 2 P G A 160 40.888 15.891 4.944 1.00 35.75 P
ATOM 3 OP1 G A 160 40.223 16.476 3.754 1.00 35.38 O
ATOM 4 OP2 G A 160 41.206 16.760 6.102 1.00 35.41 O
ATOM 5 O5' G A 160 40.014 14.651 5.470 1.00 36.26 O
ATOM 6 C5' G A 160 39.725 13.518 4.626 1.00 36.10 C
ATOM 7 C4' G A 160 38.972 12.411 5.352 1.00 35.46 C
ATOM 8 O4' G A 160 39.816 11.736 6.319 1.00 35.70 O
ATOM 9 C3' G A 160 37.786 12.884 6.169 1.00 35.00 C
ATOM 10 O3' G A 160 36.657 12.917 5.345 1.00 34.55 O
ATOM 11 C2' G A 160 37.659 11.806 7.237 1.00 35.39 C
ATOM 12 O2' G A 160 37.021 10.639 6.761 1.00 35.38 O
ATOM 13 C1' G A 160 39.112 11.500 7.532 1.00 35.64 C
ATOM 14 N9 G A 160 39.699 12.296 8.616 1.00 35.77 N
ATOM 15 C8 G A 160 40.450 13.434 8.460 1.00 35.74 C
ATOM 16 N7 G A 160 40.876 13.947 9.575 1.00 36.14 N
ATOM 17 C5 G A 160 40.379 13.095 10.541 1.00 36.01 C
ATOM 18 C6 G A 160 40.534 13.165 11.943 1.00 35.91 C
ATOM 19 O6 G A 160 41.156 14.030 12.571 1.00 35.94 O
ATOM 20 N1 G A 160 39.882 12.118 12.603 1.00 35.75 N
ATOM 21 C2 G A 160 39.173 11.122 11.960 1.00 35.83 C
ATOM 22 N2 G A 160 38.612 10.196 12.750 1.00 35.30 N
ATOM 23 N3 G A 160 39.023 11.045 10.634 1.00 36.08 N
ATOM 24 C4 G A 160 39.651 12.065 9.980 1.00 36.10 C
ATOM 25 P A A 161 35.475 13.923 5.705 1.00 34.31 P
ATOM 26 OP1 A A 161 34.615 14.053 4.500 1.00 34.54 O
ATOM 27 OP2 A A 161 36.100 15.106 6.346 1.00 33.70 O
ATOM 28 O5' A A 161 34.640 13.165 6.836 1.00 33.37 O
TER

ATOM 1 O3' U B 158 48.255 17.241 5.049 1.00 33.56 O
ATOM 2 P G B 159 46.776 17.860 5.200 1.00 33.84 P
ATOM 3 OP1 G B 159 46.471 18.553 3.930 1.00 33.87 O
ATOM 4 OP2 G B 159 46.671 18.580 6.483 1.00 34.17 O
ATOM 5 O5' G B 159 45.804 16.601 5.381 1.00 34.12 O
ATOM 6 C5' G B 159 45.302 15.883 4.258 1.00 34.38 C
ATOM 7 C4' G B 159 44.592 14.626 4.721 1.00 34.40 C
ATOM 8 O4' G B 159 45.352 13.967 5.762 1.00 34.12 O
ATOM 9 C3' G B 159 43.249 14.834 5.402 1.00 34.50 C
ATOM 10 O3' G B 159 42.237 15.173 4.466 1.00 34.96 O
ATOM 11 C2' G B 159 43.061 13.446 5.997 1.00 34.30 C
ATOM 12 O2' G B 159 42.741 12.459 5.044 1.00 34.56 O
ATOM 13 C1' G B 159 44.460 13.179 6.529 1.00 34.34 C
ATOM 14 N9 G B 159 44.552 13.493 7.954 1.00 34.44 N
ATOM 15 C8 G B 159 45.132 14.580 8.556 1.00 34.24 C
ATOM 16 N7 G B 159 45.039 14.564 9.858 1.00 34.29 N
ATOM 17 C5 G B 159 44.344 13.398 10.139 1.00 34.59 C
ATOM 18 C6 G B 159 43.938 12.837 11.378 1.00 34.40 C
ATOM 19 O6 G B 159 44.119 13.278 12.518 1.00 34.31 O
ATOM 20 N1 G B 159 43.253 11.632 11.208 1.00 34.60 N
ATOM 21 C2 G B 159 42.991 11.041 9.992 1.00 34.33 C
ATOM 22 N2 G B 159 42.321 9.889 10.018 1.00 34.26 N
ATOM 23 N3 G B 159 43.362 11.549 8.825 1.00 34.74 N
ATOM 24 C4 G B 159 44.035 12.726 8.974 1.00 34.87 C
ATOM 25 P G B 160 40.888 15.891 4.944 1.00 35.75 P
ATOM 26 OP1 G B 160 40.223 16.476 3.754 1.00 35.38 O
ATOM 27 OP2 G B 160 41.206 16.760 6.102 1.00 35.41 O
ATOM 28 O5' G B 160 40.014 14.651 5.470 1.00 36.26 O
TER

Atoms:
OP1: (40.223,16.476,3.754)
OP2: (41.206,16.760,6.102)
C3': (37.786,12.884,6.169)
C1': (39.112,11.500,7.532)
C5': (39.725,13.518,4.626)
O6: (41.156,14.030,12.571)
O4': (39.816,11.736,6.319)
C8: (40.450,13.434,8.460)
C2: (39.173,11.122,11.960)
C6: (40.534,13.165,11.943)
C5: (40.379,13.095,10.541)
C4: (39.651,12.065,9.980)
P: (40.888,15.891,4.944)
C4': (38.972,12.411,5.352)
C2': (37.659,11.806,7.237)
O2': (37.021,10.639,6.761)
N1: (39.882,12.118,12.603)
N2: (38.612,10.196,12.750)
N3: (39.023,11.045,10.634)
N7: (40.876,13.947,9.575)
N9: (39.699,12.296,8.616)
O5': (40.014,14.651,5.470)
O3': (36.657,12.917,5.345)
OP1: (46.471,18.553,3.930)
OP2: (46.671,18.580,6.483)
C3': (43.249,14.834,5.402)
C1': (44.460,13.179,6.529)
C5': (45.302,15.883,4.258)
O6: (44.119,13.278,12.518)
O4': (45.352,13.967,5.762)
C8: (45.132,14.580,8.556)
C2: (42.991,11.041,9.992)
C6: (43.938,12.837,11.378)
C5: (44.344,13.398,10.139)
C4: (44.035,12.726,8.974)
P: (46.776,17.860,5.200)
C4': (44.592,14.626,4.721)
C2': (43.061,13.446,5.997)
O2': (42.741,12.459,5.044)
N1: (43.253,11.632,11.208)
N2: (42.321,9.889,10.018)
N3: (43.362,11.549,8.825)
N7: (45.039,14.564,9.858)
N9: (44.552,13.493,7.954)
O5': (45.804,16.601,5.381)
O3': (42.237,15.173,4.466)
Image (generated by PyMOL):
PyMOL image
show in jmol