Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:X6:X5
Extra
PDB:
ATOM 1 O3' G A 5 115.601 -16.881 -13.574 1.00 87.76 O
ATOM 2 P G A 6 117.177 -16.721 -13.893 1.00 87.90 P
ATOM 3 OP1 G A 6 117.374 -15.391 -14.535 1.00 87.39 O
ATOM 4 OP2 G A 6 117.655 -17.943 -14.593 1.00 87.46 O
ATOM 5 O5' G A 6 117.841 -16.709 -12.441 1.00 86.12 O
ATOM 6 C5' G A 6 117.172 -16.073 -11.352 1.00 83.54 C
ATOM 7 C4' G A 6 117.548 -16.713 -10.034 1.00 81.49 C
ATOM 8 O4' G A 6 117.406 -18.142 -10.098 1.00 79.77 O
ATOM 9 C3' G A 6 118.973 -16.495 -9.559 1.00 81.49 C
ATOM 10 O3' G A 6 118.904 -15.250 -8.859 1.00 82.22 O
ATOM 11 C2' G A 6 119.241 -17.695 -8.630 1.00 80.24 C
ATOM 12 O2' G A 6 119.069 -17.386 -7.264 1.00 81.27 O
ATOM 13 C1' G A 6 118.165 -18.707 -9.053 1.00 79.11 C
ATOM 14 N9 G A 6 118.539 -20.078 -9.411 1.00 77.22 N
ATOM 15 C8 G A 6 118.297 -20.707 -10.616 1.00 77.10 C
ATOM 16 N7 G A 6 118.627 -21.973 -10.611 1.00 75.63 N
ATOM 17 C5 G A 6 119.144 -22.194 -9.338 1.00 73.51 C
ATOM 18 C6 G A 6 119.650 -23.383 -8.747 1.00 71.30 C
ATOM 19 O6 G A 6 119.728 -24.513 -9.237 1.00 69.58 O
ATOM 20 N1 G A 6 120.086 -23.162 -7.448 1.00 70.88 N
ATOM 21 C2 G A 6 120.040 -21.957 -6.792 1.00 71.40 C
ATOM 22 N2 G A 6 120.518 -21.953 -5.537 1.00 69.66 N
ATOM 23 N3 G A 6 119.562 -20.840 -7.325 1.00 72.72 N
ATOM 24 C4 G A 6 119.131 -21.029 -8.592 1.00 74.66 C
ATOM 25 P U A 7 120.240 -14.478 -8.412 1.00 83.12 P
ATOM 26 OP1 U A 7 121.144 -15.441 -7.710 1.00 82.74 O
ATOM 27 OP2 U A 7 119.739 -13.274 -7.687 1.00 82.63 O
ATOM 28 O5' U A 7 120.926 -13.973 -9.771 1.00 84.57 O
TER
ATOM 1 O3' G B 4 112.044 -20.921 -16.595 1.00 88.86 O
ATOM 2 P G B 5 113.650 -20.755 -16.618 1.00 89.45 P
ATOM 3 OP1 G B 5 114.003 -19.920 -17.796 1.00 90.18 O
ATOM 4 OP2 G B 5 114.291 -22.087 -16.454 1.00 89.23 O
ATOM 5 O5' G B 5 113.960 -19.948 -15.281 1.00 88.46 O
ATOM 6 C5' G B 5 113.320 -18.701 -15.011 1.00 88.84 C
ATOM 7 C4' G B 5 113.601 -18.260 -13.588 1.00 88.10 C
ATOM 8 O4' G B 5 113.029 -19.228 -12.668 1.00 87.46 O
ATOM 9 C3' G B 5 115.070 -18.158 -13.197 1.00 87.48 C
ATOM 10 O3' G B 5 115.601 -16.881 -13.574 1.00 87.76 O
ATOM 11 C2' G B 5 115.023 -18.389 -11.688 1.00 85.85 C
ATOM 12 O2' G B 5 114.631 -17.221 -10.994 1.00 85.06 O
ATOM 13 C1' G B 5 113.891 -19.412 -11.562 1.00 84.87 C
ATOM 14 N9 G B 5 114.313 -20.811 -11.575 1.00 82.88 N
ATOM 15 C8 G B 5 114.394 -21.635 -12.676 1.00 82.24 C
ATOM 16 N7 G B 5 114.771 -22.848 -12.383 1.00 80.84 N
ATOM 17 C5 G B 5 114.954 -22.825 -11.009 1.00 79.61 C
ATOM 18 C6 G B 5 115.353 -23.850 -10.132 1.00 78.48 C
ATOM 19 O6 G B 5 115.622 -25.024 -10.398 1.00 78.75 O
ATOM 20 N1 G B 5 115.427 -23.399 -8.821 1.00 77.76 N
ATOM 21 C2 G B 5 115.156 -22.120 -8.415 1.00 78.29 C
ATOM 22 N2 G B 5 115.332 -21.868 -7.122 1.00 78.47 N
ATOM 23 N3 G B 5 114.758 -21.155 -9.221 1.00 78.92 N
ATOM 24 C4 G B 5 114.684 -21.573 -10.497 1.00 80.69 C
ATOM 25 P G B 6 117.177 -16.721 -13.893 1.00 87.90 P
ATOM 26 OP1 G B 6 117.374 -15.391 -14.535 1.00 87.39 O
ATOM 27 OP2 G B 6 117.655 -17.943 -14.593 1.00 87.46 O
ATOM 28 O5' G B 6 117.841 -16.709 -12.441 1.00 86.12 O
TER
ATOM 2 P G A 6 117.177 -16.721 -13.893 1.00 87.90 P
ATOM 3 OP1 G A 6 117.374 -15.391 -14.535 1.00 87.39 O
ATOM 4 OP2 G A 6 117.655 -17.943 -14.593 1.00 87.46 O
ATOM 5 O5' G A 6 117.841 -16.709 -12.441 1.00 86.12 O
ATOM 6 C5' G A 6 117.172 -16.073 -11.352 1.00 83.54 C
ATOM 7 C4' G A 6 117.548 -16.713 -10.034 1.00 81.49 C
ATOM 8 O4' G A 6 117.406 -18.142 -10.098 1.00 79.77 O
ATOM 9 C3' G A 6 118.973 -16.495 -9.559 1.00 81.49 C
ATOM 10 O3' G A 6 118.904 -15.250 -8.859 1.00 82.22 O
ATOM 11 C2' G A 6 119.241 -17.695 -8.630 1.00 80.24 C
ATOM 12 O2' G A 6 119.069 -17.386 -7.264 1.00 81.27 O
ATOM 13 C1' G A 6 118.165 -18.707 -9.053 1.00 79.11 C
ATOM 14 N9 G A 6 118.539 -20.078 -9.411 1.00 77.22 N
ATOM 15 C8 G A 6 118.297 -20.707 -10.616 1.00 77.10 C
ATOM 16 N7 G A 6 118.627 -21.973 -10.611 1.00 75.63 N
ATOM 17 C5 G A 6 119.144 -22.194 -9.338 1.00 73.51 C
ATOM 18 C6 G A 6 119.650 -23.383 -8.747 1.00 71.30 C
ATOM 19 O6 G A 6 119.728 -24.513 -9.237 1.00 69.58 O
ATOM 20 N1 G A 6 120.086 -23.162 -7.448 1.00 70.88 N
ATOM 21 C2 G A 6 120.040 -21.957 -6.792 1.00 71.40 C
ATOM 22 N2 G A 6 120.518 -21.953 -5.537 1.00 69.66 N
ATOM 23 N3 G A 6 119.562 -20.840 -7.325 1.00 72.72 N
ATOM 24 C4 G A 6 119.131 -21.029 -8.592 1.00 74.66 C
ATOM 25 P U A 7 120.240 -14.478 -8.412 1.00 83.12 P
ATOM 26 OP1 U A 7 121.144 -15.441 -7.710 1.00 82.74 O
ATOM 27 OP2 U A 7 119.739 -13.274 -7.687 1.00 82.63 O
ATOM 28 O5' U A 7 120.926 -13.973 -9.771 1.00 84.57 O
TER
ATOM 1 O3' G B 4 112.044 -20.921 -16.595 1.00 88.86 O
ATOM 2 P G B 5 113.650 -20.755 -16.618 1.00 89.45 P
ATOM 3 OP1 G B 5 114.003 -19.920 -17.796 1.00 90.18 O
ATOM 4 OP2 G B 5 114.291 -22.087 -16.454 1.00 89.23 O
ATOM 5 O5' G B 5 113.960 -19.948 -15.281 1.00 88.46 O
ATOM 6 C5' G B 5 113.320 -18.701 -15.011 1.00 88.84 C
ATOM 7 C4' G B 5 113.601 -18.260 -13.588 1.00 88.10 C
ATOM 8 O4' G B 5 113.029 -19.228 -12.668 1.00 87.46 O
ATOM 9 C3' G B 5 115.070 -18.158 -13.197 1.00 87.48 C
ATOM 10 O3' G B 5 115.601 -16.881 -13.574 1.00 87.76 O
ATOM 11 C2' G B 5 115.023 -18.389 -11.688 1.00 85.85 C
ATOM 12 O2' G B 5 114.631 -17.221 -10.994 1.00 85.06 O
ATOM 13 C1' G B 5 113.891 -19.412 -11.562 1.00 84.87 C
ATOM 14 N9 G B 5 114.313 -20.811 -11.575 1.00 82.88 N
ATOM 15 C8 G B 5 114.394 -21.635 -12.676 1.00 82.24 C
ATOM 16 N7 G B 5 114.771 -22.848 -12.383 1.00 80.84 N
ATOM 17 C5 G B 5 114.954 -22.825 -11.009 1.00 79.61 C
ATOM 18 C6 G B 5 115.353 -23.850 -10.132 1.00 78.48 C
ATOM 19 O6 G B 5 115.622 -25.024 -10.398 1.00 78.75 O
ATOM 20 N1 G B 5 115.427 -23.399 -8.821 1.00 77.76 N
ATOM 21 C2 G B 5 115.156 -22.120 -8.415 1.00 78.29 C
ATOM 22 N2 G B 5 115.332 -21.868 -7.122 1.00 78.47 N
ATOM 23 N3 G B 5 114.758 -21.155 -9.221 1.00 78.92 N
ATOM 24 C4 G B 5 114.684 -21.573 -10.497 1.00 80.69 C
ATOM 25 P G B 6 117.177 -16.721 -13.893 1.00 87.90 P
ATOM 26 OP1 G B 6 117.374 -15.391 -14.535 1.00 87.39 O
ATOM 27 OP2 G B 6 117.655 -17.943 -14.593 1.00 87.46 O
ATOM 28 O5' G B 6 117.841 -16.709 -12.441 1.00 86.12 O
TER
Atoms:
OP1: (117.374,-15.391,-14.535)
OP2: (117.655,-17.943,-14.593)
C3': (118.973,-16.495,-9.559)
C1': (118.165,-18.707,-9.053)
C5': (117.172,-16.073,-11.352)
O6: (119.728,-24.513,-9.237)
O4': (117.406,-18.142,-10.098)
C8: (118.297,-20.707,-10.616)
C2: (120.040,-21.957,-6.792)
C6: (119.650,-23.383,-8.747)
C5: (119.144,-22.194,-9.338)
C4: (119.131,-21.029,-8.592)
P: (117.177,-16.721,-13.893)
C4': (117.548,-16.713,-10.034)
C2': (119.241,-17.695,-8.630)
O2': (119.069,-17.386,-7.264)
N1: (120.086,-23.162,-7.448)
N2: (120.518,-21.953,-5.537)
N3: (119.562,-20.840,-7.325)
N7: (118.627,-21.973,-10.611)
N9: (118.539,-20.078,-9.411)
O5': (117.841,-16.709,-12.441)
O3': (118.904,-15.250,-8.859)
OP2: (117.655,-17.943,-14.593)
C3': (118.973,-16.495,-9.559)
C1': (118.165,-18.707,-9.053)
C5': (117.172,-16.073,-11.352)
O6: (119.728,-24.513,-9.237)
O4': (117.406,-18.142,-10.098)
C8: (118.297,-20.707,-10.616)
C2: (120.040,-21.957,-6.792)
C6: (119.650,-23.383,-8.747)
C5: (119.144,-22.194,-9.338)
C4: (119.131,-21.029,-8.592)
P: (117.177,-16.721,-13.893)
C4': (117.548,-16.713,-10.034)
C2': (119.241,-17.695,-8.630)
O2': (119.069,-17.386,-7.264)
N1: (120.086,-23.162,-7.448)
N2: (120.518,-21.953,-5.537)
N3: (119.562,-20.840,-7.325)
N7: (118.627,-21.973,-10.611)
N9: (118.539,-20.078,-9.411)
O5': (117.841,-16.709,-12.441)
O3': (118.904,-15.250,-8.859)
OP1: (114.003,-19.920,-17.796)
OP2: (114.291,-22.087,-16.454)
C3': (115.070,-18.158,-13.197)
C1': (113.891,-19.412,-11.562)
C5': (113.320,-18.701,-15.011)
O6: (115.622,-25.024,-10.398)
O4': (113.029,-19.228,-12.668)
C8: (114.394,-21.635,-12.676)
C2: (115.156,-22.120,-8.415)
C6: (115.353,-23.850,-10.132)
C5: (114.954,-22.825,-11.009)
C4: (114.684,-21.573,-10.497)
P: (113.650,-20.755,-16.618)
C4': (113.601,-18.260,-13.588)
C2': (115.023,-18.389,-11.688)
O2': (114.631,-17.221,-10.994)
N1: (115.427,-23.399,-8.821)
N2: (115.332,-21.868,-7.122)
N3: (114.758,-21.155,-9.221)
N7: (114.771,-22.848,-12.383)
N9: (114.313,-20.811,-11.575)
O5': (113.960,-19.948,-15.281)
O3': (115.601,-16.881,-13.574)
OP2: (114.291,-22.087,-16.454)
C3': (115.070,-18.158,-13.197)
C1': (113.891,-19.412,-11.562)
C5': (113.320,-18.701,-15.011)
O6: (115.622,-25.024,-10.398)
O4': (113.029,-19.228,-12.668)
C8: (114.394,-21.635,-12.676)
C2: (115.156,-22.120,-8.415)
C6: (115.353,-23.850,-10.132)
C5: (114.954,-22.825,-11.009)
C4: (114.684,-21.573,-10.497)
P: (113.650,-20.755,-16.618)
C4': (113.601,-18.260,-13.588)
C2': (115.023,-18.389,-11.688)
O2': (114.631,-17.221,-10.994)
N1: (115.427,-23.399,-8.821)
N2: (115.332,-21.868,-7.122)
N3: (114.758,-21.155,-9.221)
N7: (114.771,-22.848,-12.383)
N9: (114.313,-20.811,-11.575)
O5': (113.960,-19.948,-15.281)
O3': (115.601,-16.881,-13.574)
Image (generated by PyMOL):