Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11004:11003
Extra
PDB:
ATOM 1 O3' G A1003 50.097 -49.943 38.425 1.00 43.56 O
ATOM 2 P U A1004 51.689 -50.145 38.270 1.00 39.97 P
ATOM 3 OP1 U A1004 52.215 -50.403 39.622 1.00 39.83 O
ATOM 4 OP2 U A1004 52.202 -48.961 37.503 1.00 39.81 O
ATOM 5 O5' U A1004 51.822 -51.455 37.388 1.00 40.50 O
ATOM 6 C5' U A1004 51.766 -52.707 37.998 1.00 40.75 C
ATOM 7 C4' U A1004 51.855 -53.793 36.992 1.00 41.25 C
ATOM 8 O4' U A1004 50.921 -53.534 35.924 1.00 41.35 O
ATOM 9 C3' U A1004 53.180 -53.924 36.274 1.00 41.48 C
ATOM 10 O3' U A1004 54.165 -54.552 37.059 1.00 41.56 O
ATOM 11 C2' U A1004 52.784 -54.712 35.046 1.00 41.94 C
ATOM 12 O2' U A1004 52.546 -56.062 35.396 1.00 42.28 O
ATOM 13 C1' U A1004 51.444 -54.048 34.716 1.00 41.76 C
ATOM 14 N1 U A1004 51.614 -52.931 33.809 1.00 41.62 N
ATOM 15 C2 U A1004 51.785 -53.287 32.518 1.00 42.01 C
ATOM 16 O2 U A1004 51.805 -54.426 32.188 1.00 42.42 O
ATOM 17 N3 U A1004 51.947 -52.287 31.645 1.00 41.91 N
ATOM 18 C4 U A1004 51.956 -50.977 32.014 1.00 41.46 C
ATOM 19 O4 U A1004 52.118 -50.191 31.105 1.00 41.45 O
ATOM 20 C5 U A1004 51.741 -50.660 33.403 1.00 41.07 C
ATOM 21 C6 U A1004 51.584 -51.638 34.270 1.00 41.15 C
ATOM 22 P A A1005 55.721 -54.281 36.773 1.00 46.38 P
ATOM 23 OP1 A A1005 56.484 -55.050 37.797 1.00 46.47 O
ATOM 24 OP2 A A1005 55.910 -52.813 36.684 1.00 45.97 O
ATOM 25 O5' A A1005 55.922 -54.928 35.348 1.00 46.86 O
TER
ATOM 1 O3' U B1002 48.092 -44.680 36.726 1.00 43.92 O
ATOM 2 P G B1003 49.502 -45.413 36.655 1.00 42.70 P
ATOM 3 OP1 G B1003 50.258 -44.973 37.854 1.00 42.39 O
ATOM 4 OP2 G B1003 50.059 -45.147 35.305 1.00 42.91 O
ATOM 5 O5' G B1003 49.149 -46.972 36.770 1.00 43.06 O
ATOM 6 C5' G B1003 48.229 -47.449 37.720 1.00 42.98 C
ATOM 7 C4' G B1003 48.041 -48.926 37.583 1.00 43.39 C
ATOM 8 O4' G B1003 47.164 -49.220 36.454 1.00 43.67 O
ATOM 9 C3' G B1003 49.286 -49.737 37.286 1.00 43.69 C
ATOM 10 O3' G B1003 50.097 -49.943 38.425 1.00 43.56 O
ATOM 11 C2' G B1003 48.690 -51.026 36.728 1.00 44.13 C
ATOM 12 O2' G B1003 48.126 -51.799 37.785 1.00 44.14 O
ATOM 13 C1' G B1003 47.545 -50.466 35.874 1.00 44.12 C
ATOM 14 N9 G B1003 47.963 -50.214 34.489 1.00 44.34 N
ATOM 15 C8 G B1003 48.170 -48.972 33.962 1.00 44.12 C
ATOM 16 N7 G B1003 48.525 -49.005 32.736 1.00 44.39 N
ATOM 17 C5 G B1003 48.553 -50.353 32.437 1.00 44.82 C
ATOM 18 C6 G B1003 48.872 -51.024 31.229 1.00 45.28 C
ATOM 19 O6 G B1003 49.190 -50.544 30.144 1.00 45.41 O
ATOM 20 N1 G B1003 48.822 -52.394 31.354 1.00 45.64 N
ATOM 21 C2 G B1003 48.450 -53.032 32.490 1.00 45.57 C
ATOM 22 N2 G B1003 48.410 -54.365 32.403 1.00 45.98 N
ATOM 23 N3 G B1003 48.135 -52.417 33.622 1.00 45.14 N
ATOM 24 C4 G B1003 48.210 -51.098 33.518 1.00 44.79 C
ATOM 25 P U B1004 51.689 -50.145 38.270 1.00 39.97 P
ATOM 26 OP1 U B1004 52.215 -50.403 39.622 1.00 39.83 O
ATOM 27 OP2 U B1004 52.202 -48.961 37.503 1.00 39.81 O
ATOM 28 O5' U B1004 51.822 -51.455 37.388 1.00 40.50 O
TER
ATOM 2 P U A1004 51.689 -50.145 38.270 1.00 39.97 P
ATOM 3 OP1 U A1004 52.215 -50.403 39.622 1.00 39.83 O
ATOM 4 OP2 U A1004 52.202 -48.961 37.503 1.00 39.81 O
ATOM 5 O5' U A1004 51.822 -51.455 37.388 1.00 40.50 O
ATOM 6 C5' U A1004 51.766 -52.707 37.998 1.00 40.75 C
ATOM 7 C4' U A1004 51.855 -53.793 36.992 1.00 41.25 C
ATOM 8 O4' U A1004 50.921 -53.534 35.924 1.00 41.35 O
ATOM 9 C3' U A1004 53.180 -53.924 36.274 1.00 41.48 C
ATOM 10 O3' U A1004 54.165 -54.552 37.059 1.00 41.56 O
ATOM 11 C2' U A1004 52.784 -54.712 35.046 1.00 41.94 C
ATOM 12 O2' U A1004 52.546 -56.062 35.396 1.00 42.28 O
ATOM 13 C1' U A1004 51.444 -54.048 34.716 1.00 41.76 C
ATOM 14 N1 U A1004 51.614 -52.931 33.809 1.00 41.62 N
ATOM 15 C2 U A1004 51.785 -53.287 32.518 1.00 42.01 C
ATOM 16 O2 U A1004 51.805 -54.426 32.188 1.00 42.42 O
ATOM 17 N3 U A1004 51.947 -52.287 31.645 1.00 41.91 N
ATOM 18 C4 U A1004 51.956 -50.977 32.014 1.00 41.46 C
ATOM 19 O4 U A1004 52.118 -50.191 31.105 1.00 41.45 O
ATOM 20 C5 U A1004 51.741 -50.660 33.403 1.00 41.07 C
ATOM 21 C6 U A1004 51.584 -51.638 34.270 1.00 41.15 C
ATOM 22 P A A1005 55.721 -54.281 36.773 1.00 46.38 P
ATOM 23 OP1 A A1005 56.484 -55.050 37.797 1.00 46.47 O
ATOM 24 OP2 A A1005 55.910 -52.813 36.684 1.00 45.97 O
ATOM 25 O5' A A1005 55.922 -54.928 35.348 1.00 46.86 O
TER
ATOM 1 O3' U B1002 48.092 -44.680 36.726 1.00 43.92 O
ATOM 2 P G B1003 49.502 -45.413 36.655 1.00 42.70 P
ATOM 3 OP1 G B1003 50.258 -44.973 37.854 1.00 42.39 O
ATOM 4 OP2 G B1003 50.059 -45.147 35.305 1.00 42.91 O
ATOM 5 O5' G B1003 49.149 -46.972 36.770 1.00 43.06 O
ATOM 6 C5' G B1003 48.229 -47.449 37.720 1.00 42.98 C
ATOM 7 C4' G B1003 48.041 -48.926 37.583 1.00 43.39 C
ATOM 8 O4' G B1003 47.164 -49.220 36.454 1.00 43.67 O
ATOM 9 C3' G B1003 49.286 -49.737 37.286 1.00 43.69 C
ATOM 10 O3' G B1003 50.097 -49.943 38.425 1.00 43.56 O
ATOM 11 C2' G B1003 48.690 -51.026 36.728 1.00 44.13 C
ATOM 12 O2' G B1003 48.126 -51.799 37.785 1.00 44.14 O
ATOM 13 C1' G B1003 47.545 -50.466 35.874 1.00 44.12 C
ATOM 14 N9 G B1003 47.963 -50.214 34.489 1.00 44.34 N
ATOM 15 C8 G B1003 48.170 -48.972 33.962 1.00 44.12 C
ATOM 16 N7 G B1003 48.525 -49.005 32.736 1.00 44.39 N
ATOM 17 C5 G B1003 48.553 -50.353 32.437 1.00 44.82 C
ATOM 18 C6 G B1003 48.872 -51.024 31.229 1.00 45.28 C
ATOM 19 O6 G B1003 49.190 -50.544 30.144 1.00 45.41 O
ATOM 20 N1 G B1003 48.822 -52.394 31.354 1.00 45.64 N
ATOM 21 C2 G B1003 48.450 -53.032 32.490 1.00 45.57 C
ATOM 22 N2 G B1003 48.410 -54.365 32.403 1.00 45.98 N
ATOM 23 N3 G B1003 48.135 -52.417 33.622 1.00 45.14 N
ATOM 24 C4 G B1003 48.210 -51.098 33.518 1.00 44.79 C
ATOM 25 P U B1004 51.689 -50.145 38.270 1.00 39.97 P
ATOM 26 OP1 U B1004 52.215 -50.403 39.622 1.00 39.83 O
ATOM 27 OP2 U B1004 52.202 -48.961 37.503 1.00 39.81 O
ATOM 28 O5' U B1004 51.822 -51.455 37.388 1.00 40.50 O
TER
Atoms:
C4: (51.956,-50.977,32.014)
N3: (51.947,-52.287,31.645)
OP1: (52.215,-50.403,39.622)
OP2: (52.202,-48.961,37.503)
C2: (51.785,-53.287,32.518)
C1': (51.444,-54.048,34.716)
C3': (53.180,-53.924,36.274)
O5': (51.822,-51.455,37.388)
O4': (50.921,-53.534,35.924)
C5': (51.766,-52.707,37.998)
P: (51.689,-50.145,38.270)
C4': (51.855,-53.793,36.992)
C2': (52.784,-54.712,35.046)
O2': (52.546,-56.062,35.396)
N1: (51.614,-52.931,33.809)
O4: (52.118,-50.191,31.105)
O2: (51.805,-54.426,32.188)
C6: (51.584,-51.638,34.270)
C5: (51.741,-50.660,33.403)
O3': (54.165,-54.552,37.059)
N3: (51.947,-52.287,31.645)
OP1: (52.215,-50.403,39.622)
OP2: (52.202,-48.961,37.503)
C2: (51.785,-53.287,32.518)
C1': (51.444,-54.048,34.716)
C3': (53.180,-53.924,36.274)
O5': (51.822,-51.455,37.388)
O4': (50.921,-53.534,35.924)
C5': (51.766,-52.707,37.998)
P: (51.689,-50.145,38.270)
C4': (51.855,-53.793,36.992)
C2': (52.784,-54.712,35.046)
O2': (52.546,-56.062,35.396)
N1: (51.614,-52.931,33.809)
O4: (52.118,-50.191,31.105)
O2: (51.805,-54.426,32.188)
C6: (51.584,-51.638,34.270)
C5: (51.741,-50.660,33.403)
O3': (54.165,-54.552,37.059)
OP1: (50.258,-44.973,37.854)
OP2: (50.059,-45.147,35.305)
C3': (49.286,-49.737,37.286)
C1': (47.545,-50.466,35.874)
C5': (48.229,-47.449,37.720)
O6: (49.190,-50.544,30.144)
O4': (47.164,-49.220,36.454)
C8: (48.170,-48.972,33.962)
C2: (48.450,-53.032,32.490)
C6: (48.872,-51.024,31.229)
C5: (48.553,-50.353,32.437)
C4: (48.210,-51.098,33.518)
P: (49.502,-45.413,36.655)
C4': (48.041,-48.926,37.583)
C2': (48.690,-51.026,36.728)
O2': (48.126,-51.799,37.785)
N1: (48.822,-52.394,31.354)
N2: (48.410,-54.365,32.403)
N3: (48.135,-52.417,33.622)
N7: (48.525,-49.005,32.736)
N9: (47.963,-50.214,34.489)
O5': (49.149,-46.972,36.770)
O3': (50.097,-49.943,38.425)
OP2: (50.059,-45.147,35.305)
C3': (49.286,-49.737,37.286)
C1': (47.545,-50.466,35.874)
C5': (48.229,-47.449,37.720)
O6: (49.190,-50.544,30.144)
O4': (47.164,-49.220,36.454)
C8: (48.170,-48.972,33.962)
C2: (48.450,-53.032,32.490)
C6: (48.872,-51.024,31.229)
C5: (48.553,-50.353,32.437)
C4: (48.210,-51.098,33.518)
P: (49.502,-45.413,36.655)
C4': (48.041,-48.926,37.583)
C2': (48.690,-51.026,36.728)
O2': (48.126,-51.799,37.785)
N1: (48.822,-52.394,31.354)
N2: (48.410,-54.365,32.403)
N3: (48.135,-52.417,33.622)
N7: (48.525,-49.005,32.736)
N9: (47.963,-50.214,34.489)
O5': (49.149,-46.972,36.770)
O3': (50.097,-49.943,38.425)
Image (generated by PyMOL):