Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RFK:D2:D1
Extra
PDB:
ATOM 1 O3' G A 1 3.995 34.572 109.017 1.00 39.88 O
ATOM 2 P G A 2 3.272 34.930 107.626 1.00 39.83 P
ATOM 3 OP1 G A 2 4.076 36.011 107.009 1.00 39.83 O
ATOM 4 OP2 G A 2 1.805 35.097 107.844 1.00 40.19 O
ATOM 5 O5' G A 2 3.457 33.584 106.786 1.00 38.94 O
ATOM 6 C5' G A 2 2.373 33.167 105.986 1.00 37.65 C
ATOM 7 C4' G A 2 1.684 31.897 106.457 1.00 35.95 C
ATOM 8 O4' G A 2 1.075 32.008 107.763 1.00 35.79 O
ATOM 9 C3' G A 2 0.464 31.632 105.605 1.00 35.52 C
ATOM 10 O3' G A 2 0.894 31.251 104.314 1.00 34.20 O
ATOM 11 C2' G A 2 -0.334 30.605 106.420 1.00 34.97 C
ATOM 12 O2' G A 2 0.118 29.270 106.364 1.00 34.08 O
ATOM 13 C1' G A 2 -0.090 31.156 107.816 1.00 35.65 C
ATOM 14 N9 G A 2 -1.206 31.955 108.319 1.00 36.33 N
ATOM 15 C8 G A 2 -1.079 33.272 108.729 1.00 37.31 C
ATOM 16 N7 G A 2 -2.193 33.802 109.148 1.00 37.65 N
ATOM 17 C5 G A 2 -3.116 32.776 109.004 1.00 36.41 C
ATOM 18 C6 G A 2 -4.494 32.791 109.314 1.00 37.20 C
ATOM 19 O6 G A 2 -5.141 33.743 109.773 1.00 37.27 O
ATOM 20 N1 G A 2 -5.117 31.564 109.037 1.00 38.10 N
ATOM 21 C2 G A 2 -4.447 30.470 108.517 1.00 37.91 C
ATOM 22 N2 G A 2 -5.196 29.378 108.315 1.00 37.47 N
ATOM 23 N3 G A 2 -3.134 30.450 108.236 1.00 37.57 N
ATOM 24 C4 G A 2 -2.530 31.633 108.498 1.00 35.67 C
ATOM 25 P C A 3 0.347 32.054 103.042 1.00 33.12 P
ATOM 26 OP1 C A 3 1.288 31.651 101.972 1.00 33.44 O
ATOM 27 OP2 C A 3 0.099 33.497 103.292 1.00 31.71 O
ATOM 28 O5' C A 3 -1.083 31.348 102.857 1.00 32.42 O
TER
ATOM 1 P G B 1 3.067 38.595 112.099 1.00 42.23 P
ATOM 2 OP1 G B 1 4.282 39.100 111.400 1.00 41.68 O
ATOM 3 OP2 G B 1 1.753 39.219 111.779 1.00 41.56 O
ATOM 4 O5' G B 1 2.988 36.977 111.982 1.00 41.55 O
ATOM 5 C5' G B 1 4.213 36.239 111.799 1.00 41.00 C
ATOM 6 C4' G B 1 4.003 34.780 111.459 1.00 39.87 C
ATOM 7 O4' G B 1 3.187 34.198 112.490 1.00 40.14 O
ATOM 8 C3' G B 1 3.207 34.492 110.201 1.00 40.06 C
ATOM 9 O3' G B 1 3.995 34.572 109.017 1.00 39.88 O
ATOM 10 C2' G B 1 2.707 33.074 110.481 1.00 40.48 C
ATOM 11 O2' G B 1 3.677 32.060 110.280 1.00 40.89 O
ATOM 12 C1' G B 1 2.352 33.183 111.958 1.00 39.81 C
ATOM 13 N9 G B 1 0.967 33.588 112.157 1.00 40.18 N
ATOM 14 C8 G B 1 0.546 34.877 112.380 1.00 40.57 C
ATOM 15 N7 G B 1 -0.741 34.989 112.518 1.00 40.79 N
ATOM 16 C5 G B 1 -1.198 33.706 112.368 1.00 40.00 C
ATOM 17 C6 G B 1 -2.524 33.273 112.423 1.00 40.86 C
ATOM 18 O6 G B 1 -3.516 33.986 112.621 1.00 41.19 O
ATOM 19 N1 G B 1 -2.608 31.896 112.225 1.00 41.10 N
ATOM 20 C2 G B 1 -1.522 31.070 111.994 1.00 40.89 C
ATOM 21 N2 G B 1 -1.810 29.769 111.829 1.00 41.49 N
ATOM 22 N3 G B 1 -0.256 31.473 111.940 1.00 39.50 N
ATOM 23 C4 G B 1 -0.175 32.814 112.139 1.00 39.75 C
ATOM 24 P G B 2 3.272 34.930 107.626 1.00 39.83 P
ATOM 25 OP1 G B 2 4.076 36.011 107.009 1.00 39.83 O
ATOM 26 OP2 G B 2 1.805 35.097 107.844 1.00 40.19 O
ATOM 27 O5' G B 2 3.457 33.584 106.786 1.00 38.94 O
TER
ATOM 2 P G A 2 3.272 34.930 107.626 1.00 39.83 P
ATOM 3 OP1 G A 2 4.076 36.011 107.009 1.00 39.83 O
ATOM 4 OP2 G A 2 1.805 35.097 107.844 1.00 40.19 O
ATOM 5 O5' G A 2 3.457 33.584 106.786 1.00 38.94 O
ATOM 6 C5' G A 2 2.373 33.167 105.986 1.00 37.65 C
ATOM 7 C4' G A 2 1.684 31.897 106.457 1.00 35.95 C
ATOM 8 O4' G A 2 1.075 32.008 107.763 1.00 35.79 O
ATOM 9 C3' G A 2 0.464 31.632 105.605 1.00 35.52 C
ATOM 10 O3' G A 2 0.894 31.251 104.314 1.00 34.20 O
ATOM 11 C2' G A 2 -0.334 30.605 106.420 1.00 34.97 C
ATOM 12 O2' G A 2 0.118 29.270 106.364 1.00 34.08 O
ATOM 13 C1' G A 2 -0.090 31.156 107.816 1.00 35.65 C
ATOM 14 N9 G A 2 -1.206 31.955 108.319 1.00 36.33 N
ATOM 15 C8 G A 2 -1.079 33.272 108.729 1.00 37.31 C
ATOM 16 N7 G A 2 -2.193 33.802 109.148 1.00 37.65 N
ATOM 17 C5 G A 2 -3.116 32.776 109.004 1.00 36.41 C
ATOM 18 C6 G A 2 -4.494 32.791 109.314 1.00 37.20 C
ATOM 19 O6 G A 2 -5.141 33.743 109.773 1.00 37.27 O
ATOM 20 N1 G A 2 -5.117 31.564 109.037 1.00 38.10 N
ATOM 21 C2 G A 2 -4.447 30.470 108.517 1.00 37.91 C
ATOM 22 N2 G A 2 -5.196 29.378 108.315 1.00 37.47 N
ATOM 23 N3 G A 2 -3.134 30.450 108.236 1.00 37.57 N
ATOM 24 C4 G A 2 -2.530 31.633 108.498 1.00 35.67 C
ATOM 25 P C A 3 0.347 32.054 103.042 1.00 33.12 P
ATOM 26 OP1 C A 3 1.288 31.651 101.972 1.00 33.44 O
ATOM 27 OP2 C A 3 0.099 33.497 103.292 1.00 31.71 O
ATOM 28 O5' C A 3 -1.083 31.348 102.857 1.00 32.42 O
TER
ATOM 1 P G B 1 3.067 38.595 112.099 1.00 42.23 P
ATOM 2 OP1 G B 1 4.282 39.100 111.400 1.00 41.68 O
ATOM 3 OP2 G B 1 1.753 39.219 111.779 1.00 41.56 O
ATOM 4 O5' G B 1 2.988 36.977 111.982 1.00 41.55 O
ATOM 5 C5' G B 1 4.213 36.239 111.799 1.00 41.00 C
ATOM 6 C4' G B 1 4.003 34.780 111.459 1.00 39.87 C
ATOM 7 O4' G B 1 3.187 34.198 112.490 1.00 40.14 O
ATOM 8 C3' G B 1 3.207 34.492 110.201 1.00 40.06 C
ATOM 9 O3' G B 1 3.995 34.572 109.017 1.00 39.88 O
ATOM 10 C2' G B 1 2.707 33.074 110.481 1.00 40.48 C
ATOM 11 O2' G B 1 3.677 32.060 110.280 1.00 40.89 O
ATOM 12 C1' G B 1 2.352 33.183 111.958 1.00 39.81 C
ATOM 13 N9 G B 1 0.967 33.588 112.157 1.00 40.18 N
ATOM 14 C8 G B 1 0.546 34.877 112.380 1.00 40.57 C
ATOM 15 N7 G B 1 -0.741 34.989 112.518 1.00 40.79 N
ATOM 16 C5 G B 1 -1.198 33.706 112.368 1.00 40.00 C
ATOM 17 C6 G B 1 -2.524 33.273 112.423 1.00 40.86 C
ATOM 18 O6 G B 1 -3.516 33.986 112.621 1.00 41.19 O
ATOM 19 N1 G B 1 -2.608 31.896 112.225 1.00 41.10 N
ATOM 20 C2 G B 1 -1.522 31.070 111.994 1.00 40.89 C
ATOM 21 N2 G B 1 -1.810 29.769 111.829 1.00 41.49 N
ATOM 22 N3 G B 1 -0.256 31.473 111.940 1.00 39.50 N
ATOM 23 C4 G B 1 -0.175 32.814 112.139 1.00 39.75 C
ATOM 24 P G B 2 3.272 34.930 107.626 1.00 39.83 P
ATOM 25 OP1 G B 2 4.076 36.011 107.009 1.00 39.83 O
ATOM 26 OP2 G B 2 1.805 35.097 107.844 1.00 40.19 O
ATOM 27 O5' G B 2 3.457 33.584 106.786 1.00 38.94 O
TER
Atoms:
OP1: (4.076,36.011,107.009)
OP2: (1.805,35.097,107.844)
C3': (0.464,31.632,105.605)
C1': (-0.090,31.156,107.816)
C5': (2.373,33.167,105.986)
O6: (-5.141,33.743,109.773)
O4': (1.075,32.008,107.763)
C8: (-1.079,33.272,108.729)
C2: (-4.447,30.470,108.517)
C6: (-4.494,32.791,109.314)
C5: (-3.116,32.776,109.004)
C4: (-2.530,31.633,108.498)
P: (3.272,34.930,107.626)
C4': (1.684,31.897,106.457)
C2': (-0.334,30.605,106.420)
O2': (0.118,29.270,106.364)
N1: (-5.117,31.564,109.037)
N2: (-5.196,29.378,108.315)
N3: (-3.134,30.450,108.236)
N7: (-2.193,33.802,109.148)
N9: (-1.206,31.955,108.319)
O5': (3.457,33.584,106.786)
O3': (0.894,31.251,104.314)
OP2: (1.805,35.097,107.844)
C3': (0.464,31.632,105.605)
C1': (-0.090,31.156,107.816)
C5': (2.373,33.167,105.986)
O6: (-5.141,33.743,109.773)
O4': (1.075,32.008,107.763)
C8: (-1.079,33.272,108.729)
C2: (-4.447,30.470,108.517)
C6: (-4.494,32.791,109.314)
C5: (-3.116,32.776,109.004)
C4: (-2.530,31.633,108.498)
P: (3.272,34.930,107.626)
C4': (1.684,31.897,106.457)
C2': (-0.334,30.605,106.420)
O2': (0.118,29.270,106.364)
N1: (-5.117,31.564,109.037)
N2: (-5.196,29.378,108.315)
N3: (-3.134,30.450,108.236)
N7: (-2.193,33.802,109.148)
N9: (-1.206,31.955,108.319)
O5': (3.457,33.584,106.786)
O3': (0.894,31.251,104.314)
OP1: (4.282,39.100,111.400)
OP2: (1.753,39.219,111.779)
C3': (3.207,34.492,110.201)
C1': (2.352,33.183,111.958)
C5': (4.213,36.239,111.799)
O6: (-3.516,33.986,112.621)
O4': (3.187,34.198,112.490)
C8: (0.546,34.877,112.380)
C2: (-1.522,31.070,111.994)
C6: (-2.524,33.273,112.423)
C5: (-1.198,33.706,112.368)
C4: (-0.175,32.814,112.139)
P: (3.067,38.595,112.099)
C4': (4.003,34.780,111.459)
C2': (2.707,33.074,110.481)
O2': (3.677,32.060,110.280)
N1: (-2.608,31.896,112.225)
N2: (-1.810,29.769,111.829)
N3: (-0.256,31.473,111.940)
N7: (-0.741,34.989,112.518)
N9: (0.967,33.588,112.157)
O5': (2.988,36.977,111.982)
O3': (3.995,34.572,109.017)
OP2: (1.753,39.219,111.779)
C3': (3.207,34.492,110.201)
C1': (2.352,33.183,111.958)
C5': (4.213,36.239,111.799)
O6: (-3.516,33.986,112.621)
O4': (3.187,34.198,112.490)
C8: (0.546,34.877,112.380)
C2: (-1.522,31.070,111.994)
C6: (-2.524,33.273,112.423)
C5: (-1.198,33.706,112.368)
C4: (-0.175,32.814,112.139)
P: (3.067,38.595,112.099)
C4': (4.003,34.780,111.459)
C2': (2.707,33.074,110.481)
O2': (3.677,32.060,110.280)
N1: (-2.608,31.896,112.225)
N2: (-1.810,29.769,111.829)
N3: (-0.256,31.473,111.940)
N7: (-0.741,34.989,112.518)
N9: (0.967,33.588,112.157)
O5': (2.988,36.977,111.982)
O3': (3.995,34.572,109.017)
Image (generated by PyMOL):