ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1JJ2:0596:0595

Extra

PDB:
ATOM 1 O3' G A 595 5.989 120.482 87.635 1.00 39.46 O
ATOM 2 P A A 596 7.473 120.946 88.028 1.00 40.13 P
ATOM 3 OP1 A A 596 8.335 119.766 87.777 1.00 39.19 O
ATOM 4 OP2 A A 596 7.480 121.599 89.359 1.00 39.04 O
ATOM 5 O5' A A 596 7.820 122.084 86.973 1.00 41.40 O
ATOM 6 C5' A A 596 7.990 121.782 85.583 1.00 39.23 C
ATOM 7 C4' A A 596 8.158 123.060 84.807 1.00 39.20 C
ATOM 8 O4' A A 596 6.936 123.842 84.903 1.00 40.39 O
ATOM 9 C3' A A 596 9.220 124.002 85.343 1.00 38.70 C
ATOM 10 O3' A A 596 10.526 123.627 84.938 1.00 38.37 O
ATOM 11 C2' A A 596 8.769 125.335 84.766 1.00 39.55 C
ATOM 12 O2' A A 596 9.060 125.441 83.380 1.00 40.22 O
ATOM 13 C1' A A 596 7.254 125.226 84.957 1.00 37.67 C
ATOM 14 N9 A A 596 6.803 125.749 86.250 1.00 35.99 N
ATOM 15 C8 A A 596 6.546 125.046 87.401 1.00 35.25 C
ATOM 16 N7 A A 596 6.148 125.796 88.402 1.00 34.57 N
ATOM 17 C5 A A 596 6.142 127.079 87.875 1.00 34.50 C
ATOM 18 C6 A A 596 5.804 128.330 88.427 1.00 35.11 C
ATOM 19 N6 A A 596 5.378 128.502 89.683 1.00 34.79 N
ATOM 20 N1 A A 596 5.915 129.415 87.633 1.00 34.34 N
ATOM 21 C2 A A 596 6.328 129.247 86.377 1.00 35.01 C
ATOM 22 N3 A A 596 6.667 128.129 85.742 1.00 36.53 N
ATOM 23 C4 A A 596 6.550 127.066 86.555 1.00 35.40 C
ATOM 24 P U A 597 11.777 123.944 85.901 1.00 37.82 P
ATOM 25 OP1 U A 597 12.960 123.356 85.246 1.00 39.42 O
ATOM 26 OP2 U A 597 11.447 123.563 87.301 1.00 36.62 O
ATOM 27 O5' U A 597 11.922 125.527 85.839 1.00 37.97 O
TER

ATOM 1 O3' C B 594 1.532 122.285 91.575 1.00 41.39 O
ATOM 2 P G B 595 3.087 122.673 91.491 1.00 41.94 P
ATOM 3 OP1 G B 595 3.796 121.744 92.411 1.00 41.85 O
ATOM 4 OP2 G B 595 3.220 124.144 91.677 1.00 36.85 O
ATOM 5 O5' G B 595 3.502 122.315 89.993 1.00 38.28 O
ATOM 6 C5' G B 595 3.418 120.966 89.515 1.00 38.61 C
ATOM 7 C4' G B 595 3.634 120.917 88.020 1.00 39.31 C
ATOM 8 O4' G B 595 2.646 121.745 87.350 1.00 39.66 O
ATOM 9 C3' G B 595 4.957 121.452 87.501 1.00 39.73 C
ATOM 10 O3' G B 595 5.989 120.482 87.635 1.00 39.46 O
ATOM 11 C2' G B 595 4.623 121.729 86.042 1.00 37.75 C
ATOM 12 O2' G B 595 4.579 120.539 85.274 1.00 38.50 O
ATOM 13 C1' G B 595 3.203 122.283 86.165 1.00 36.33 C
ATOM 14 N9 G B 595 3.163 123.737 86.257 1.00 33.65 N
ATOM 15 C8 G B 595 2.820 124.500 87.349 1.00 34.33 C
ATOM 16 N7 G B 595 2.894 125.783 87.123 1.00 32.45 N
ATOM 17 C5 G B 595 3.305 125.872 85.799 1.00 32.24 C
ATOM 18 C6 G B 595 3.562 127.006 84.991 1.00 32.75 C
ATOM 19 O6 G B 595 3.468 128.210 85.288 1.00 34.23 O
ATOM 20 N1 G B 595 3.967 126.638 83.714 1.00 30.04 N
ATOM 21 C2 G B 595 4.100 125.352 83.267 1.00 30.52 C
ATOM 22 N2 G B 595 4.494 125.206 81.997 1.00 32.95 N
ATOM 23 N3 G B 595 3.862 124.287 84.006 1.00 31.70 N
ATOM 24 C4 G B 595 3.471 124.618 85.253 1.00 33.16 C
ATOM 25 P A B 596 7.473 120.946 88.028 1.00 40.13 P
ATOM 26 OP1 A B 596 8.335 119.766 87.777 1.00 39.19 O
ATOM 27 OP2 A B 596 7.480 121.599 89.359 1.00 39.04 O
ATOM 28 O5' A B 596 7.820 122.084 86.973 1.00 41.40 O
TER

Atoms:
OP1: (8.335,119.766,87.777)
OP2: (7.480,121.599,89.359)
C3': (9.220,124.002,85.343)
C1': (7.254,125.226,84.957)
C5': (7.990,121.782,85.583)
O4': (6.936,123.842,84.903)
C8: (6.546,125.046,87.401)
O2': (9.060,125.441,83.380)
C6: (5.804,128.330,88.427)
C5: (6.142,127.079,87.875)
C4: (6.550,127.066,86.555)
P: (7.473,120.946,88.028)
C4': (8.158,123.060,84.807)
C2': (8.769,125.335,84.766)
C2: (6.328,129.247,86.377)
N1: (5.915,129.415,87.633)
N3: (6.667,128.129,85.742)
N6: (5.378,128.502,89.683)
N7: (6.148,125.796,88.402)
N9: (6.803,125.749,86.250)
O5': (7.820,122.084,86.973)
O3': (10.526,123.627,84.938)
OP1: (3.796,121.744,92.411)
OP2: (3.220,124.144,91.677)
C3': (4.957,121.452,87.501)
C1': (3.203,122.283,86.165)
C5': (3.418,120.966,89.515)
O6: (3.468,128.210,85.288)
O4': (2.646,121.745,87.350)
C8: (2.820,124.500,87.349)
C2: (4.100,125.352,83.267)
C6: (3.562,127.006,84.991)
C5: (3.305,125.872,85.799)
C4: (3.471,124.618,85.253)
P: (3.087,122.673,91.491)
C4': (3.634,120.917,88.020)
C2': (4.623,121.729,86.042)
O2': (4.579,120.539,85.274)
N1: (3.967,126.638,83.714)
N2: (4.494,125.206,81.997)
N3: (3.862,124.287,84.006)
N7: (2.894,125.783,87.123)
N9: (3.163,123.737,86.257)
O5': (3.502,122.315,89.993)
O3': (5.989,120.482,87.635)
Image (generated by PyMOL):
PyMOL image
show in jmol