Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1542:1541
Extra
PDB:
ATOM 1 O3' G A 541 101.541 -29.495 15.202 1.00 57.07 O
ATOM 2 P A A 542 102.468 -29.468 13.913 1.00 58.04 P
ATOM 3 OP1 A A 542 101.694 -30.090 12.797 1.00 58.28 O
ATOM 4 OP2 A A 542 103.768 -30.074 14.314 1.00 58.34 O
ATOM 5 O5' A A 542 102.643 -27.904 13.656 1.00 57.90 O
ATOM 6 C5' A A 542 101.603 -27.137 13.054 1.00 57.70 C
ATOM 7 C4' A A 542 101.994 -25.687 12.909 1.00 57.62 C
ATOM 8 O4' A A 542 102.378 -25.158 14.208 1.00 57.26 O
ATOM 9 C3' A A 542 103.204 -25.410 12.030 1.00 58.13 C
ATOM 10 O3' A A 542 102.891 -25.390 10.645 1.00 58.47 O
ATOM 11 C2' A A 542 103.709 -24.074 12.571 1.00 57.90 C
ATOM 12 O2' A A 542 102.896 -23.013 12.114 1.00 57.70 O
ATOM 13 C1' A A 542 103.449 -24.238 14.057 1.00 57.43 C
ATOM 14 N9 A A 542 104.632 -24.748 14.785 1.00 57.59 N
ATOM 15 C8 A A 542 104.790 -25.985 15.359 1.00 57.65 C
ATOM 16 N7 A A 542 105.930 -26.185 15.959 1.00 57.81 N
ATOM 17 C5 A A 542 106.553 -24.986 15.776 1.00 57.84 C
ATOM 18 C6 A A 542 107.788 -24.586 16.187 1.00 58.00 C
ATOM 19 N6 A A 542 108.550 -25.411 16.876 1.00 58.14 N
ATOM 20 N1 A A 542 108.192 -23.357 15.856 1.00 58.03 N
ATOM 21 C2 A A 542 107.359 -22.582 15.176 1.00 57.89 C
ATOM 22 N3 A A 542 106.142 -22.848 14.726 1.00 57.74 N
ATOM 23 C4 A A 542 105.798 -24.089 15.065 1.00 57.72 C
ATOM 24 P C A 543 103.800 -26.199 9.566 1.00 72.90 P
ATOM 25 OP1 C A 543 102.952 -26.386 8.369 1.00 73.10 O
ATOM 26 OP2 C A 543 104.368 -27.408 10.255 1.00 73.01 O
ATOM 27 O5' C A 543 104.974 -25.173 9.234 1.00 73.14 O
TER
ATOM 1 O3' C B 540 100.722 -32.857 20.918 1.00 56.07 O
ATOM 2 P G B 541 101.645 -32.999 19.600 1.00 56.55 P
ATOM 3 OP1 G B 541 101.304 -34.333 18.991 1.00 56.88 O
ATOM 4 OP2 G B 541 103.061 -32.710 19.996 1.00 56.74 O
ATOM 5 O5' G B 541 101.121 -31.837 18.677 1.00 56.44 O
ATOM 6 C5' G B 541 102.012 -31.095 17.897 1.00 56.73 C
ATOM 7 C4' G B 541 101.424 -29.772 17.578 1.00 56.44 C
ATOM 8 O4' G B 541 101.593 -28.882 18.697 1.00 56.04 O
ATOM 9 C3' G B 541 102.044 -29.048 16.424 1.00 56.78 C
ATOM 10 O3' G B 541 101.541 -29.495 15.202 1.00 57.07 O
ATOM 11 C2' G B 541 101.692 -27.608 16.720 1.00 56.38 C
ATOM 12 O2' G B 541 100.338 -27.360 16.394 1.00 56.11 O
ATOM 13 C1' G B 541 101.814 -27.579 18.233 1.00 56.01 C
ATOM 14 N9 G B 541 103.143 -27.127 18.691 1.00 56.14 N
ATOM 15 C8 G B 541 104.000 -27.833 19.465 1.00 56.27 C
ATOM 16 N7 G B 541 105.087 -27.182 19.733 1.00 56.38 N
ATOM 17 C5 G B 541 104.925 -25.944 19.121 1.00 56.31 C
ATOM 18 C6 G B 541 105.778 -24.796 19.069 1.00 56.37 C
ATOM 19 O6 G B 541 106.898 -24.600 19.572 1.00 56.51 O
ATOM 20 N1 G B 541 105.191 -23.778 18.326 1.00 56.27 N
ATOM 21 C2 G B 541 103.964 -23.839 17.713 1.00 56.13 C
ATOM 22 N2 G B 541 103.538 -22.749 17.031 1.00 56.06 N
ATOM 23 N3 G B 541 103.210 -24.914 17.764 1.00 56.08 N
ATOM 24 C4 G B 541 103.728 -25.912 18.481 1.00 56.16 C
ATOM 25 P A B 542 102.468 -29.468 13.913 1.00 58.04 P
ATOM 26 OP1 A B 542 101.694 -30.090 12.797 1.00 58.28 O
ATOM 27 OP2 A B 542 103.768 -30.074 14.314 1.00 58.34 O
ATOM 28 O5' A B 542 102.643 -27.904 13.656 1.00 57.90 O
TER
ATOM 2 P A A 542 102.468 -29.468 13.913 1.00 58.04 P
ATOM 3 OP1 A A 542 101.694 -30.090 12.797 1.00 58.28 O
ATOM 4 OP2 A A 542 103.768 -30.074 14.314 1.00 58.34 O
ATOM 5 O5' A A 542 102.643 -27.904 13.656 1.00 57.90 O
ATOM 6 C5' A A 542 101.603 -27.137 13.054 1.00 57.70 C
ATOM 7 C4' A A 542 101.994 -25.687 12.909 1.00 57.62 C
ATOM 8 O4' A A 542 102.378 -25.158 14.208 1.00 57.26 O
ATOM 9 C3' A A 542 103.204 -25.410 12.030 1.00 58.13 C
ATOM 10 O3' A A 542 102.891 -25.390 10.645 1.00 58.47 O
ATOM 11 C2' A A 542 103.709 -24.074 12.571 1.00 57.90 C
ATOM 12 O2' A A 542 102.896 -23.013 12.114 1.00 57.70 O
ATOM 13 C1' A A 542 103.449 -24.238 14.057 1.00 57.43 C
ATOM 14 N9 A A 542 104.632 -24.748 14.785 1.00 57.59 N
ATOM 15 C8 A A 542 104.790 -25.985 15.359 1.00 57.65 C
ATOM 16 N7 A A 542 105.930 -26.185 15.959 1.00 57.81 N
ATOM 17 C5 A A 542 106.553 -24.986 15.776 1.00 57.84 C
ATOM 18 C6 A A 542 107.788 -24.586 16.187 1.00 58.00 C
ATOM 19 N6 A A 542 108.550 -25.411 16.876 1.00 58.14 N
ATOM 20 N1 A A 542 108.192 -23.357 15.856 1.00 58.03 N
ATOM 21 C2 A A 542 107.359 -22.582 15.176 1.00 57.89 C
ATOM 22 N3 A A 542 106.142 -22.848 14.726 1.00 57.74 N
ATOM 23 C4 A A 542 105.798 -24.089 15.065 1.00 57.72 C
ATOM 24 P C A 543 103.800 -26.199 9.566 1.00 72.90 P
ATOM 25 OP1 C A 543 102.952 -26.386 8.369 1.00 73.10 O
ATOM 26 OP2 C A 543 104.368 -27.408 10.255 1.00 73.01 O
ATOM 27 O5' C A 543 104.974 -25.173 9.234 1.00 73.14 O
TER
ATOM 1 O3' C B 540 100.722 -32.857 20.918 1.00 56.07 O
ATOM 2 P G B 541 101.645 -32.999 19.600 1.00 56.55 P
ATOM 3 OP1 G B 541 101.304 -34.333 18.991 1.00 56.88 O
ATOM 4 OP2 G B 541 103.061 -32.710 19.996 1.00 56.74 O
ATOM 5 O5' G B 541 101.121 -31.837 18.677 1.00 56.44 O
ATOM 6 C5' G B 541 102.012 -31.095 17.897 1.00 56.73 C
ATOM 7 C4' G B 541 101.424 -29.772 17.578 1.00 56.44 C
ATOM 8 O4' G B 541 101.593 -28.882 18.697 1.00 56.04 O
ATOM 9 C3' G B 541 102.044 -29.048 16.424 1.00 56.78 C
ATOM 10 O3' G B 541 101.541 -29.495 15.202 1.00 57.07 O
ATOM 11 C2' G B 541 101.692 -27.608 16.720 1.00 56.38 C
ATOM 12 O2' G B 541 100.338 -27.360 16.394 1.00 56.11 O
ATOM 13 C1' G B 541 101.814 -27.579 18.233 1.00 56.01 C
ATOM 14 N9 G B 541 103.143 -27.127 18.691 1.00 56.14 N
ATOM 15 C8 G B 541 104.000 -27.833 19.465 1.00 56.27 C
ATOM 16 N7 G B 541 105.087 -27.182 19.733 1.00 56.38 N
ATOM 17 C5 G B 541 104.925 -25.944 19.121 1.00 56.31 C
ATOM 18 C6 G B 541 105.778 -24.796 19.069 1.00 56.37 C
ATOM 19 O6 G B 541 106.898 -24.600 19.572 1.00 56.51 O
ATOM 20 N1 G B 541 105.191 -23.778 18.326 1.00 56.27 N
ATOM 21 C2 G B 541 103.964 -23.839 17.713 1.00 56.13 C
ATOM 22 N2 G B 541 103.538 -22.749 17.031 1.00 56.06 N
ATOM 23 N3 G B 541 103.210 -24.914 17.764 1.00 56.08 N
ATOM 24 C4 G B 541 103.728 -25.912 18.481 1.00 56.16 C
ATOM 25 P A B 542 102.468 -29.468 13.913 1.00 58.04 P
ATOM 26 OP1 A B 542 101.694 -30.090 12.797 1.00 58.28 O
ATOM 27 OP2 A B 542 103.768 -30.074 14.314 1.00 58.34 O
ATOM 28 O5' A B 542 102.643 -27.904 13.656 1.00 57.90 O
TER
Atoms:
OP1: (101.694,-30.090,12.797)
OP2: (103.768,-30.074,14.314)
C3': (103.204,-25.410,12.030)
C1': (103.449,-24.238,14.057)
C5': (101.603,-27.137,13.054)
O4': (102.378,-25.158,14.208)
C8: (104.790,-25.985,15.359)
O2': (102.896,-23.013,12.114)
C6: (107.788,-24.586,16.187)
C5: (106.553,-24.986,15.776)
C4: (105.798,-24.089,15.065)
P: (102.468,-29.468,13.913)
C4': (101.994,-25.687,12.909)
C2': (103.709,-24.074,12.571)
C2: (107.359,-22.582,15.176)
N1: (108.192,-23.357,15.856)
N3: (106.142,-22.848,14.726)
N6: (108.550,-25.411,16.876)
N7: (105.930,-26.185,15.959)
N9: (104.632,-24.748,14.785)
O5': (102.643,-27.904,13.656)
O3': (102.891,-25.390,10.645)
OP2: (103.768,-30.074,14.314)
C3': (103.204,-25.410,12.030)
C1': (103.449,-24.238,14.057)
C5': (101.603,-27.137,13.054)
O4': (102.378,-25.158,14.208)
C8: (104.790,-25.985,15.359)
O2': (102.896,-23.013,12.114)
C6: (107.788,-24.586,16.187)
C5: (106.553,-24.986,15.776)
C4: (105.798,-24.089,15.065)
P: (102.468,-29.468,13.913)
C4': (101.994,-25.687,12.909)
C2': (103.709,-24.074,12.571)
C2: (107.359,-22.582,15.176)
N1: (108.192,-23.357,15.856)
N3: (106.142,-22.848,14.726)
N6: (108.550,-25.411,16.876)
N7: (105.930,-26.185,15.959)
N9: (104.632,-24.748,14.785)
O5': (102.643,-27.904,13.656)
O3': (102.891,-25.390,10.645)
OP1: (101.304,-34.333,18.991)
OP2: (103.061,-32.710,19.996)
C3': (102.044,-29.048,16.424)
C1': (101.814,-27.579,18.233)
C5': (102.012,-31.095,17.897)
O6: (106.898,-24.600,19.572)
O4': (101.593,-28.882,18.697)
C8: (104.000,-27.833,19.465)
C2: (103.964,-23.839,17.713)
C6: (105.778,-24.796,19.069)
C5: (104.925,-25.944,19.121)
C4: (103.728,-25.912,18.481)
P: (101.645,-32.999,19.600)
C4': (101.424,-29.772,17.578)
C2': (101.692,-27.608,16.720)
O2': (100.338,-27.360,16.394)
N1: (105.191,-23.778,18.326)
N2: (103.538,-22.749,17.031)
N3: (103.210,-24.914,17.764)
N7: (105.087,-27.182,19.733)
N9: (103.143,-27.127,18.691)
O5': (101.121,-31.837,18.677)
O3': (101.541,-29.495,15.202)
OP2: (103.061,-32.710,19.996)
C3': (102.044,-29.048,16.424)
C1': (101.814,-27.579,18.233)
C5': (102.012,-31.095,17.897)
O6: (106.898,-24.600,19.572)
O4': (101.593,-28.882,18.697)
C8: (104.000,-27.833,19.465)
C2: (103.964,-23.839,17.713)
C6: (105.778,-24.796,19.069)
C5: (104.925,-25.944,19.121)
C4: (103.728,-25.912,18.481)
P: (101.645,-32.999,19.600)
C4': (101.424,-29.772,17.578)
C2': (101.692,-27.608,16.720)
O2': (100.338,-27.360,16.394)
N1: (105.191,-23.778,18.326)
N2: (103.538,-22.749,17.031)
N3: (103.210,-24.914,17.764)
N7: (105.087,-27.182,19.733)
N9: (103.143,-27.127,18.691)
O5': (101.121,-31.837,18.677)
O3': (101.541,-29.495,15.202)
Image (generated by PyMOL):