ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1201:1200

Extra

PDB:
ATOM 1 O3' G A 200 116.124 1.144 86.378 1.00 59.64 O
ATOM 2 P A A 201 116.504 -0.084 87.333 1.00 71.27 P
ATOM 3 OP1 A A 201 117.190 -1.077 86.487 1.00 71.32 O
ATOM 4 OP2 A A 201 115.267 -0.489 88.062 1.00 70.97 O
ATOM 5 O5' A A 201 117.534 0.565 88.353 1.00 71.86 O
ATOM 6 C5' A A 201 118.750 1.101 87.898 1.00 72.23 C
ATOM 7 C4' A A 201 119.452 1.850 88.988 1.00 72.74 C
ATOM 8 O4' A A 201 118.587 2.878 89.527 1.00 72.59 O
ATOM 9 C3' A A 201 119.819 1.053 90.215 1.00 73.10 C
ATOM 10 O3' A A 201 120.898 0.182 90.017 1.00 73.42 O
ATOM 11 C2' A A 201 120.080 2.147 91.226 1.00 73.47 C
ATOM 12 O2' A A 201 121.317 2.796 90.946 1.00 73.90 O
ATOM 13 C1' A A 201 118.937 3.110 90.883 1.00 73.03 C
ATOM 14 N9 A A 201 117.749 2.875 91.729 1.00 72.77 N
ATOM 15 C8 A A 201 116.560 2.224 91.465 1.00 72.26 C
ATOM 16 N7 A A 201 115.734 2.216 92.486 1.00 72.20 N
ATOM 17 C5 A A 201 116.419 2.904 93.484 1.00 72.71 C
ATOM 18 C6 A A 201 116.123 3.261 94.824 1.00 72.95 C
ATOM 19 N6 A A 201 114.992 2.967 95.452 1.00 72.69 N
ATOM 20 N1 A A 201 117.042 3.963 95.525 1.00 73.49 N
ATOM 21 C2 A A 201 118.198 4.273 94.932 1.00 73.78 C
ATOM 22 N3 A A 201 118.597 3.998 93.694 1.00 73.60 N
ATOM 23 C4 A A 201 117.661 3.309 93.021 1.00 73.06 C
ATOM 24 P C A 202 120.759 -1.333 90.511 1.00 65.96 P
ATOM 25 OP1 C A 202 121.809 -2.131 89.816 1.00 66.19 O
ATOM 26 OP2 C A 202 119.330 -1.725 90.335 1.00 65.39 O
ATOM 27 O5' C A 202 121.105 -1.206 92.054 1.00 66.44 O
TER

ATOM 1 O3' G B 199 110.131 1.587 85.852 1.00 56.89 O
ATOM 2 P G B 200 110.991 0.497 86.673 1.00 57.94 P
ATOM 3 OP1 G B 200 111.004 -0.725 85.851 1.00 57.75 O
ATOM 4 OP2 G B 200 110.421 0.417 88.040 1.00 58.02 O
ATOM 5 O5' G B 200 112.464 1.148 86.718 1.00 58.46 O
ATOM 6 C5' G B 200 113.078 1.660 85.537 1.00 58.47 C
ATOM 7 C4' G B 200 114.229 2.598 85.844 1.00 58.96 C
ATOM 8 O4' G B 200 113.744 3.826 86.430 1.00 58.97 O
ATOM 9 C3' G B 200 115.249 2.130 86.860 1.00 59.47 C
ATOM 10 O3' G B 200 116.124 1.144 86.378 1.00 59.64 O
ATOM 11 C2' G B 200 115.943 3.430 87.239 1.00 59.86 C
ATOM 12 O2' G B 200 116.821 3.859 86.213 1.00 59.99 O
ATOM 13 C1' G B 200 114.750 4.372 87.284 1.00 59.51 C
ATOM 14 N9 G B 200 114.221 4.455 88.650 1.00 59.61 N
ATOM 15 C8 G B 200 113.081 3.910 89.173 1.00 59.30 C
ATOM 16 N7 G B 200 112.992 4.159 90.454 1.00 59.56 N
ATOM 17 C5 G B 200 114.152 4.866 90.793 1.00 60.07 C
ATOM 18 C6 G B 200 114.646 5.390 92.033 1.00 60.55 C
ATOM 19 O6 G B 200 114.153 5.388 93.163 1.00 60.64 O
ATOM 20 N1 G B 200 115.868 6.006 91.905 1.00 60.99 N
ATOM 21 C2 G B 200 116.554 6.107 90.728 1.00 60.97 C
ATOM 22 N2 G B 200 117.726 6.761 90.823 1.00 61.46 N
ATOM 23 N3 G B 200 116.111 5.619 89.560 1.00 60.53 N
ATOM 24 C4 G B 200 114.918 5.025 89.675 1.00 60.10 C
ATOM 25 P A B 201 116.504 -0.084 87.333 1.00 71.27 P
ATOM 26 OP1 A B 201 117.190 -1.077 86.487 1.00 71.32 O
ATOM 27 OP2 A B 201 115.267 -0.489 88.062 1.00 70.97 O
ATOM 28 O5' A B 201 117.534 0.565 88.353 1.00 71.86 O
TER

Atoms:
OP1: (117.190,-1.077,86.487)
OP2: (115.267,-0.489,88.062)
C3': (119.819,1.053,90.215)
C1': (118.937,3.110,90.883)
C5': (118.750,1.101,87.898)
O4': (118.587,2.878,89.527)
C8: (116.560,2.224,91.465)
O2': (121.317,2.796,90.946)
C6: (116.123,3.261,94.824)
C5: (116.419,2.904,93.484)
C4: (117.661,3.309,93.021)
P: (116.504,-0.084,87.333)
C4': (119.452,1.850,88.988)
C2': (120.080,2.147,91.226)
C2: (118.198,4.273,94.932)
N1: (117.042,3.963,95.525)
N3: (118.597,3.998,93.694)
N6: (114.992,2.967,95.452)
N7: (115.734,2.216,92.486)
N9: (117.749,2.875,91.729)
O5': (117.534,0.565,88.353)
O3': (120.898,0.182,90.017)
OP1: (111.004,-0.725,85.851)
OP2: (110.421,0.417,88.040)
C3': (115.249,2.130,86.860)
C1': (114.750,4.372,87.284)
C5': (113.078,1.660,85.537)
O6: (114.153,5.388,93.163)
O4': (113.744,3.826,86.430)
C8: (113.081,3.910,89.173)
C2: (116.554,6.107,90.728)
C6: (114.646,5.390,92.033)
C5: (114.152,4.866,90.793)
C4: (114.918,5.025,89.675)
P: (110.991,0.497,86.673)
C4': (114.229,2.598,85.844)
C2': (115.943,3.430,87.239)
O2': (116.821,3.859,86.213)
N1: (115.868,6.006,91.905)
N2: (117.726,6.761,90.823)
N3: (116.111,5.619,89.560)
N7: (112.992,4.159,90.454)
N9: (114.221,4.455,88.650)
O5': (112.464,1.148,86.718)
O3': (116.124,1.144,86.378)
Image (generated by PyMOL):
PyMOL image
show in jmol