ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 4TRA:A4:A3

Extra

PDB:
ATOM 1 O3' G A 3 18.850 14.949 57.828 1.00 27.06 O
ATOM 2 P A A 4 20.089 14.640 56.809 1.00 28.41 P
ATOM 3 OP1 A A 4 20.439 13.184 56.906 1.00 32.32 O
ATOM 4 OP2 A A 4 21.169 15.505 57.343 1.00 26.68 O
ATOM 5 O5' A A 4 19.526 15.016 55.371 1.00 16.70 O
ATOM 6 C5' A A 4 18.627 14.066 54.724 1.00 16.63 C
ATOM 7 C4' A A 4 17.628 14.887 53.949 1.00 16.22 C
ATOM 8 O4' A A 4 17.358 16.090 54.644 1.00 17.33 O
ATOM 9 C3' A A 4 18.124 15.337 52.575 1.00 17.89 C
ATOM 10 O3' A A 4 18.011 14.330 51.573 1.00 15.55 O
ATOM 11 C2' A A 4 17.248 16.562 52.300 1.00 13.53 C
ATOM 12 O2' A A 4 16.005 16.073 51.815 1.00 11.51 O
ATOM 13 C1' A A 4 17.131 17.130 53.690 1.00 14.94 C
ATOM 14 N9 A A 4 18.161 18.170 53.836 1.00 14.40 N
ATOM 15 C8 A A 4 19.193 18.181 54.757 1.00 11.88 C
ATOM 16 N7 A A 4 19.963 19.233 54.660 1.00 12.69 N
ATOM 17 C5 A A 4 19.400 19.958 53.609 1.00 13.64 C
ATOM 18 C6 A A 4 19.770 21.195 53.028 1.00 17.30 C
ATOM 19 N6 A A 4 20.812 21.909 53.415 1.00 15.64 N
ATOM 20 N1 A A 4 18.967 21.605 51.993 1.00 18.26 N
ATOM 21 C2 A A 4 17.894 20.875 51.589 1.00 17.81 C
ATOM 22 N3 A A 4 17.491 19.705 52.090 1.00 14.01 N
ATOM 23 C4 A A 4 18.291 19.312 53.108 1.00 12.30 C
ATOM 24 P U A 5 19.410 13.853 50.910 1.00 17.85 P
ATOM 25 OP1 U A 5 19.257 12.441 50.425 1.00 23.85 O
ATOM 26 OP2 U A 5 20.412 14.027 51.993 1.00 8.17 O
ATOM 27 O5' U A 5 19.583 14.865 49.682 1.00 6.78 O
TER

ATOM 1 O3' G B 2 20.386 18.429 63.468 1.00 36.61 O
ATOM 2 P G B 3 21.215 17.513 62.450 1.00 47.69 P
ATOM 3 OP1 G B 3 22.161 16.596 63.177 1.00 46.13 O
ATOM 4 OP2 G B 3 21.925 18.474 61.561 1.00 43.36 O
ATOM 5 O5' G B 3 20.059 16.681 61.723 1.00 37.46 O
ATOM 6 C5' G B 3 20.173 16.534 60.284 1.00 31.08 C
ATOM 7 C4' G B 3 18.767 16.534 59.719 1.00 25.17 C
ATOM 8 O4' G B 3 18.144 17.788 59.929 1.00 22.23 O
ATOM 9 C3' G B 3 18.707 16.321 58.215 1.00 25.88 C
ATOM 10 O3' G B 3 18.850 14.949 57.828 1.00 27.06 O
ATOM 11 C2' G B 3 17.348 16.917 57.860 1.00 26.15 C
ATOM 12 O2' G B 3 16.378 15.916 58.167 1.00 27.28 O
ATOM 13 C1' G B 3 17.278 18.075 58.846 1.00 23.13 C
ATOM 14 N9 G B 3 17.694 19.289 58.119 1.00 19.06 N
ATOM 15 C8 G B 3 18.750 20.115 58.393 1.00 19.00 C
ATOM 16 N7 G B 3 18.873 21.111 57.553 1.00 17.81 N
ATOM 17 C5 G B 3 17.817 20.925 56.664 1.00 18.66 C
ATOM 18 C6 G B 3 17.408 21.678 55.516 1.00 20.16 C
ATOM 19 O6 G B 3 17.927 22.702 55.064 1.00 19.43 O
ATOM 20 N1 G B 3 16.305 21.172 54.886 1.00 18.14 N
ATOM 21 C2 G B 3 15.666 20.048 55.306 1.00 17.90 C
ATOM 22 N2 G B 3 14.603 19.694 54.579 1.00 19.56 N
ATOM 23 N3 G B 3 16.005 19.312 56.357 1.00 16.17 N
ATOM 24 C4 G B 3 17.088 19.806 56.987 1.00 16.65 C
ATOM 25 P A B 4 20.089 14.640 56.809 1.00 28.41 P
ATOM 26 OP1 A B 4 20.439 13.184 56.906 1.00 32.32 O
ATOM 27 OP2 A B 4 21.169 15.505 57.343 1.00 26.68 O
ATOM 28 O5' A B 4 19.526 15.016 55.371 1.00 16.70 O
TER

Atoms:
OP1: (20.439,13.184,56.906)
OP2: (21.169,15.505,57.343)
C3': (18.124,15.337,52.575)
C1': (17.131,17.130,53.690)
C5': (18.627,14.066,54.724)
O4': (17.358,16.090,54.644)
C8: (19.193,18.181,54.757)
O2': (16.005,16.073,51.815)
C6: (19.770,21.195,53.028)
C5: (19.400,19.958,53.609)
C4: (18.291,19.312,53.108)
P: (20.089,14.640,56.809)
C4': (17.628,14.887,53.949)
C2': (17.248,16.562,52.300)
C2: (17.894,20.875,51.589)
N1: (18.967,21.605,51.993)
N3: (17.491,19.705,52.090)
N6: (20.812,21.909,53.415)
N7: (19.963,19.233,54.660)
N9: (18.161,18.170,53.836)
O5': (19.526,15.016,55.371)
O3': (18.011,14.330,51.573)
OP1: (22.161,16.596,63.177)
OP2: (21.925,18.474,61.561)
C3': (18.707,16.321,58.215)
C1': (17.278,18.075,58.846)
C5': (20.173,16.534,60.284)
O6: (17.927,22.702,55.064)
O4': (18.144,17.788,59.929)
C8: (18.750,20.115,58.393)
C2: (15.666,20.048,55.306)
C6: (17.408,21.678,55.516)
C5: (17.817,20.925,56.664)
C4: (17.088,19.806,56.987)
P: (21.215,17.513,62.450)
C4': (18.767,16.534,59.719)
C2': (17.348,16.917,57.860)
O2': (16.378,15.916,58.167)
N1: (16.305,21.172,54.886)
N2: (14.603,19.694,54.579)
N3: (16.005,19.312,56.357)
N7: (18.873,21.111,57.553)
N9: (17.694,19.289,58.119)
O5': (20.059,16.681,61.723)
O3': (18.850,14.949,57.828)
Image (generated by PyMOL):
PyMOL image
show in jmol