ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NPY:B10:B9

Extra

PDB:
ATOM 1 O3' G A 9 41.803 21.124 45.176 1.00 67.65 O
ATOM 2 P G A 10 41.714 22.721 45.089 1.00 67.35 P
ATOM 3 OP1 G A 10 42.121 23.120 43.722 1.00 68.84 O
ATOM 4 OP2 G A 10 42.447 23.256 46.266 1.00 67.91 O
ATOM 5 O5' G A 10 40.154 23.028 45.221 1.00 69.46 O
ATOM 6 C5' G A 10 39.293 22.741 44.129 1.00 67.11 C
ATOM 7 C4' G A 10 37.844 22.985 44.474 1.00 66.35 C
ATOM 8 O4' G A 10 37.485 22.188 45.630 1.00 63.55 O
ATOM 9 C3' G A 10 37.442 24.399 44.863 1.00 67.99 C
ATOM 10 O3' G A 10 37.229 25.215 43.718 1.00 70.92 O
ATOM 11 C2' G A 10 36.160 24.141 45.638 1.00 65.38 C
ATOM 12 O2' G A 10 35.093 23.806 44.773 1.00 65.32 O
ATOM 13 C1' G A 10 36.540 22.889 46.415 1.00 60.86 C
ATOM 14 N9 G A 10 37.165 23.253 47.677 1.00 59.80 N
ATOM 15 C8 G A 10 38.501 23.219 47.991 1.00 59.82 C
ATOM 16 N7 G A 10 38.752 23.627 49.205 1.00 61.06 N
ATOM 17 C5 G A 10 37.502 23.944 49.724 1.00 60.09 C
ATOM 18 C6 G A 10 37.135 24.439 50.998 1.00 60.12 C
ATOM 19 O6 G A 10 37.865 24.701 51.964 1.00 60.49 O
ATOM 20 N1 G A 10 35.760 24.627 51.094 1.00 58.59 N
ATOM 21 C2 G A 10 34.859 24.376 50.094 1.00 58.05 C
ATOM 22 N2 G A 10 33.578 24.638 50.371 1.00 58.43 N
ATOM 23 N3 G A 10 35.188 23.908 48.906 1.00 59.09 N
ATOM 24 C4 G A 10 36.517 23.718 48.790 1.00 59.07 C
ATOM 25 P G A 11 37.486 26.799 43.803 1.00 69.21 P
ATOM 26 OP1 G A 11 37.163 27.343 42.462 1.00 73.38 O
ATOM 27 OP2 G A 11 38.825 27.065 44.412 1.00 68.70 O
ATOM 28 O5' G A 11 36.349 27.303 44.791 1.00 68.63 O
TER

ATOM 1 O3' A B 8 45.546 18.432 49.184 1.00 67.66 O
ATOM 2 P G B 9 45.314 19.953 48.739 1.00 68.38 P
ATOM 3 OP1 G B 9 46.322 20.317 47.712 1.00 67.55 O
ATOM 4 OP2 G B 9 45.243 20.724 50.006 1.00 70.50 O
ATOM 5 O5' G B 9 43.880 19.931 48.041 1.00 67.91 O
ATOM 6 C5' G B 9 43.651 19.126 46.886 1.00 64.43 C
ATOM 7 C4' G B 9 42.189 19.131 46.505 1.00 62.11 C
ATOM 8 O4' G B 9 41.412 18.450 47.524 1.00 60.63 O
ATOM 9 C3' G B 9 41.544 20.493 46.411 1.00 63.77 C
ATOM 10 O3' G B 9 41.803 21.124 45.176 1.00 67.65 O
ATOM 11 C2' G B 9 40.072 20.168 46.609 1.00 63.55 C
ATOM 12 O2' G B 9 39.476 19.629 45.446 1.00 66.20 O
ATOM 13 C1' G B 9 40.154 19.086 47.679 1.00 59.42 C
ATOM 14 N9 G B 9 40.094 19.642 49.029 1.00 59.01 N
ATOM 15 C8 G B 9 41.157 19.905 49.857 1.00 58.92 C
ATOM 16 N7 G B 9 40.800 20.408 51.008 1.00 60.17 N
ATOM 17 C5 G B 9 39.416 20.483 50.937 1.00 58.45 C
ATOM 18 C6 G B 9 38.474 20.951 51.886 1.00 58.10 C
ATOM 19 O6 G B 9 38.684 21.440 53.004 1.00 58.33 O
ATOM 20 N1 G B 9 37.174 20.825 51.417 1.00 56.59 N
ATOM 21 C2 G B 9 36.824 20.336 50.184 1.00 55.83 C
ATOM 22 N2 G B 9 35.515 20.297 49.916 1.00 53.21 N
ATOM 23 N3 G B 9 37.693 19.916 49.281 1.00 56.09 N
ATOM 24 C4 G B 9 38.962 20.011 49.722 1.00 57.68 C
ATOM 25 P G B 10 41.714 22.721 45.089 1.00 67.35 P
ATOM 26 OP1 G B 10 42.121 23.120 43.722 1.00 68.84 O
ATOM 27 OP2 G B 10 42.447 23.256 46.266 1.00 67.91 O
ATOM 28 O5' G B 10 40.154 23.028 45.221 1.00 69.46 O
TER

Atoms:
OP1: (42.121,23.120,43.722)
OP2: (42.447,23.256,46.266)
C3': (37.442,24.399,44.863)
C1': (36.540,22.889,46.415)
C5': (39.293,22.741,44.129)
O6: (37.865,24.701,51.964)
O4': (37.485,22.188,45.630)
C8: (38.501,23.219,47.991)
C2: (34.859,24.376,50.094)
C6: (37.135,24.439,50.998)
C5: (37.502,23.944,49.724)
C4: (36.517,23.718,48.790)
P: (41.714,22.721,45.089)
C4': (37.844,22.985,44.474)
C2': (36.160,24.141,45.638)
O2': (35.093,23.806,44.773)
N1: (35.760,24.627,51.094)
N2: (33.578,24.638,50.371)
N3: (35.188,23.908,48.906)
N7: (38.752,23.627,49.205)
N9: (37.165,23.253,47.677)
O5': (40.154,23.028,45.221)
O3': (37.229,25.215,43.718)
OP1: (46.322,20.317,47.712)
OP2: (45.243,20.724,50.006)
C3': (41.544,20.493,46.411)
C1': (40.154,19.086,47.679)
C5': (43.651,19.126,46.886)
O6: (38.684,21.440,53.004)
O4': (41.412,18.450,47.524)
C8: (41.157,19.905,49.857)
C2: (36.824,20.336,50.184)
C6: (38.474,20.951,51.886)
C5: (39.416,20.483,50.937)
C4: (38.962,20.011,49.722)
P: (45.314,19.953,48.739)
C4': (42.189,19.131,46.505)
C2': (40.072,20.168,46.609)
O2': (39.476,19.629,45.446)
N1: (37.174,20.825,51.417)
N2: (35.515,20.297,49.916)
N3: (37.693,19.916,49.281)
N7: (40.800,20.408,51.008)
N9: (40.094,19.642,49.029)
O5': (43.880,19.931,48.041)
O3': (41.803,21.124,45.176)
Image (generated by PyMOL):
PyMOL image
show in jmol