ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A80:A79

Extra

PDB:
ATOM 1 O3' G A 79 34.715 173.494 43.597 1.00 75.89 O
ATOM 2 P A A 80 34.076 173.731 42.152 1.00 77.03 P
ATOM 3 OP1 A A 80 33.132 174.863 42.324 1.00 78.81 O
ATOM 4 OP2 A A 80 33.584 172.430 41.620 1.00 76.32 O
ATOM 5 O5' A A 80 35.296 174.230 41.257 1.00 75.29 O
ATOM 6 C5' A A 80 35.864 175.532 41.461 1.00 74.55 C
ATOM 7 C4' A A 80 37.203 175.632 40.777 1.00 73.78 C
ATOM 8 O4' A A 80 38.001 174.477 41.145 1.00 73.12 O
ATOM 9 C3' A A 80 37.185 175.538 39.265 1.00 73.97 C
ATOM 10 O3' A A 80 36.821 176.755 38.638 1.00 74.31 O
ATOM 11 C2' A A 80 38.616 175.125 38.949 1.00 73.01 C
ATOM 12 O2' A A 80 39.564 176.168 39.018 1.00 74.11 O
ATOM 13 C1' A A 80 38.885 174.142 40.082 1.00 70.86 C
ATOM 14 N9 A A 80 38.611 172.779 39.636 1.00 67.43 N
ATOM 15 C8 A A 80 37.479 172.011 39.793 1.00 65.24 C
ATOM 16 N7 A A 80 37.550 170.846 39.200 1.00 63.97 N
ATOM 17 C5 A A 80 38.818 170.843 38.627 1.00 64.19 C
ATOM 18 C6 A A 80 39.503 169.900 37.855 1.00 63.26 C
ATOM 19 N6 A A 80 38.978 168.727 37.498 1.00 62.53 N
ATOM 20 N1 A A 80 40.761 170.206 37.452 1.00 62.34 N
ATOM 21 C2 A A 80 41.279 171.388 37.804 1.00 61.30 C
ATOM 22 N3 A A 80 40.733 172.359 38.521 1.00 62.15 N
ATOM 23 C4 A A 80 39.487 172.019 38.905 1.00 64.86 C
ATOM 24 P G A 81 36.048 176.708 37.236 1.00 74.93 P
ATOM 25 OP1 G A 81 35.878 178.132 36.857 1.00 75.27 O
ATOM 26 OP2 G A 81 34.845 175.836 37.386 1.00 73.14 O
ATOM 27 O5' G A 81 37.084 176.004 36.238 1.00 72.10 O
TER

ATOM 1 O3' G B 78 33.551 167.627 45.428 1.00 72.94 O
ATOM 2 P G B 79 33.084 168.712 44.353 1.00 74.36 P
ATOM 3 OP1 G B 79 31.820 169.242 44.944 1.00 73.16 O
ATOM 4 OP2 G B 79 33.072 168.112 42.987 1.00 72.56 O
ATOM 5 O5' G B 79 34.230 169.825 44.379 1.00 73.80 O
ATOM 6 C5' G B 79 34.245 170.857 45.383 1.00 74.35 C
ATOM 7 C4' G B 79 35.430 171.777 45.181 1.00 74.38 C
ATOM 8 O4' G B 79 36.674 171.038 45.323 1.00 73.76 O
ATOM 9 C3' G B 79 35.555 172.384 43.797 1.00 74.60 C
ATOM 10 O3' G B 79 34.715 173.494 43.597 1.00 75.89 O
ATOM 11 C2' G B 79 37.017 172.778 43.755 1.00 74.35 C
ATOM 12 O2' G B 79 37.293 173.942 44.514 1.00 76.29 O
ATOM 13 C1' G B 79 37.643 171.559 44.420 1.00 72.37 C
ATOM 14 N9 G B 79 37.941 170.540 43.419 1.00 69.71 N
ATOM 15 C8 G B 79 37.160 169.469 43.047 1.00 69.16 C
ATOM 16 N7 G B 79 37.725 168.713 42.146 1.00 67.81 N
ATOM 17 C5 G B 79 38.946 169.327 41.900 1.00 66.24 C
ATOM 18 C6 G B 79 40.008 168.953 41.032 1.00 65.09 C
ATOM 19 O6 G B 79 40.080 167.982 40.278 1.00 64.19 O
ATOM 20 N1 G B 79 41.064 169.846 41.106 1.00 64.66 N
ATOM 21 C2 G B 79 41.098 170.955 41.913 1.00 66.02 C
ATOM 22 N2 G B 79 42.209 171.694 41.858 1.00 67.75 N
ATOM 23 N3 G B 79 40.119 171.316 42.721 1.00 65.92 N
ATOM 24 C4 G B 79 39.085 170.462 42.668 1.00 67.01 C
ATOM 25 P A B 80 34.076 173.731 42.152 1.00 77.03 P
ATOM 26 OP1 A B 80 33.132 174.863 42.324 1.00 78.81 O
ATOM 27 OP2 A B 80 33.584 172.430 41.620 1.00 76.32 O
ATOM 28 O5' A B 80 35.296 174.230 41.257 1.00 75.29 O
TER

Atoms:
OP1: (33.132,174.863,42.324)
OP2: (33.584,172.430,41.620)
C3': (37.185,175.538,39.265)
C1': (38.885,174.142,40.082)
C5': (35.864,175.532,41.461)
O4': (38.001,174.477,41.145)
C8: (37.479,172.011,39.793)
O2': (39.564,176.168,39.018)
C6: (39.503,169.900,37.855)
C5: (38.818,170.843,38.627)
C4: (39.487,172.019,38.905)
P: (34.076,173.731,42.152)
C4': (37.203,175.632,40.777)
C2': (38.616,175.125,38.949)
C2: (41.279,171.388,37.804)
N1: (40.761,170.206,37.452)
N3: (40.733,172.359,38.521)
N6: (38.978,168.727,37.498)
N7: (37.550,170.846,39.200)
N9: (38.611,172.779,39.636)
O5': (35.296,174.230,41.257)
O3': (36.821,176.755,38.638)
OP1: (31.820,169.242,44.944)
OP2: (33.072,168.112,42.987)
C3': (35.555,172.384,43.797)
C1': (37.643,171.559,44.420)
C5': (34.245,170.857,45.383)
O6: (40.080,167.982,40.278)
O4': (36.674,171.038,45.323)
C8: (37.160,169.469,43.047)
C2: (41.098,170.955,41.913)
C6: (40.008,168.953,41.032)
C5: (38.946,169.327,41.900)
C4: (39.085,170.462,42.668)
P: (33.084,168.712,44.353)
C4': (35.430,171.777,45.181)
C2': (37.017,172.778,43.755)
O2': (37.293,173.942,44.514)
N1: (41.064,169.846,41.106)
N2: (42.209,171.694,41.858)
N3: (40.119,171.316,42.721)
N7: (37.725,168.713,42.146)
N9: (37.941,170.540,43.419)
O5': (34.230,169.825,44.379)
O3': (34.715,173.494,43.597)
Image (generated by PyMOL):
PyMOL image
show in jmol