Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B53:B52
Extra
PDB:
ATOM 1 O3' G A 52 71.993 2.496 109.494 1.00 97.90 O
ATOM 2 P A A 53 70.558 2.963 110.043 1.00 98.36 P
ATOM 3 OP1 A A 53 70.377 2.438 111.427 1.00 99.11 O
ATOM 4 OP2 A A 53 69.562 2.629 108.990 1.00 97.14 O
ATOM 5 O5' A A 53 70.704 4.542 110.149 1.00 96.63 O
ATOM 6 C5' A A 53 71.618 5.141 111.087 1.00 93.85 C
ATOM 7 C4' A A 53 71.369 6.625 111.152 1.00 91.44 C
ATOM 8 O4' A A 53 71.669 7.230 109.862 1.00 89.73 O
ATOM 9 C3' A A 53 69.909 6.972 111.379 1.00 90.32 C
ATOM 10 O3' A A 53 69.572 6.893 112.756 1.00 90.22 O
ATOM 11 C2' A A 53 69.821 8.377 110.809 1.00 89.34 C
ATOM 12 O2' A A 53 70.370 9.331 111.693 1.00 90.59 O
ATOM 13 C1' A A 53 70.730 8.255 109.587 1.00 88.42 C
ATOM 14 N9 A A 53 70.009 7.904 108.368 1.00 86.88 N
ATOM 15 C8 A A 53 69.843 6.663 107.802 1.00 87.52 C
ATOM 16 N7 A A 53 69.153 6.677 106.684 1.00 87.14 N
ATOM 17 C5 A A 53 68.840 8.017 106.505 1.00 86.42 C
ATOM 18 C6 A A 53 68.126 8.696 105.500 1.00 85.72 C
ATOM 19 N6 A A 53 67.584 8.095 104.440 1.00 84.53 N
ATOM 20 N1 A A 53 67.990 10.032 105.623 1.00 85.28 N
ATOM 21 C2 A A 53 68.543 10.638 106.685 1.00 85.34 C
ATOM 22 N3 A A 53 69.241 10.112 107.690 1.00 85.80 N
ATOM 23 C4 A A 53 69.356 8.783 107.539 1.00 86.58 C
ATOM 24 P U A 54 68.036 6.747 113.186 1.00 89.31 P
ATOM 25 OP1 U A 54 68.029 6.406 114.633 1.00 89.60 O
ATOM 26 OP2 U A 54 67.378 5.848 112.206 1.00 89.49 O
ATOM 27 O5' U A 54 67.452 8.213 113.010 1.00 90.52 O
TER
ATOM 1 O3' A B 51 73.109 -0.949 104.457 1.00 98.27 O
ATOM 2 P G B 52 71.703 -0.445 105.045 1.00 98.84 P
ATOM 3 OP1 G B 52 71.188 -1.512 105.947 1.00 99.31 O
ATOM 4 OP2 G B 52 70.870 0.018 103.908 1.00 98.13 O
ATOM 5 O5' G B 52 72.114 0.800 105.955 1.00 98.91 O
ATOM 6 C5' G B 52 73.019 0.610 107.067 1.00 98.60 C
ATOM 7 C4' G B 52 73.473 1.939 107.624 1.00 97.94 C
ATOM 8 O4' G B 52 74.056 2.735 106.560 1.00 97.66 O
ATOM 9 C3' G B 52 72.374 2.836 108.168 1.00 97.71 C
ATOM 10 O3' G B 52 71.993 2.496 109.494 1.00 97.90 O
ATOM 11 C2' G B 52 73.033 4.202 108.119 1.00 97.44 C
ATOM 12 O2' G B 52 73.939 4.380 109.192 1.00 97.97 O
ATOM 13 C1' G B 52 73.780 4.112 106.787 1.00 97.29 C
ATOM 14 N9 G B 52 72.983 4.628 105.673 1.00 96.60 N
ATOM 15 C8 G B 52 72.377 3.912 104.666 1.00 96.57 C
ATOM 16 N7 G B 52 71.696 4.663 103.841 1.00 96.28 N
ATOM 17 C5 G B 52 71.866 5.952 104.328 1.00 96.52 C
ATOM 18 C6 G B 52 71.352 7.188 103.854 1.00 96.51 C
ATOM 19 O6 G B 52 70.611 7.391 102.882 1.00 96.58 O
ATOM 20 N1 G B 52 71.777 8.257 104.643 1.00 95.42 N
ATOM 21 C2 G B 52 72.584 8.149 105.748 1.00 95.40 C
ATOM 22 N2 G B 52 72.860 9.282 106.391 1.00 94.50 N
ATOM 23 N3 G B 52 73.076 7.005 106.196 1.00 96.08 N
ATOM 24 C4 G B 52 72.672 5.952 105.446 1.00 96.37 C
ATOM 25 P A B 53 70.558 2.963 110.043 1.00 98.36 P
ATOM 26 OP1 A B 53 70.377 2.438 111.427 1.00 99.11 O
ATOM 27 OP2 A B 53 69.562 2.629 108.990 1.00 97.14 O
ATOM 28 O5' A B 53 70.704 4.542 110.149 1.00 96.63 O
TER
ATOM 2 P A A 53 70.558 2.963 110.043 1.00 98.36 P
ATOM 3 OP1 A A 53 70.377 2.438 111.427 1.00 99.11 O
ATOM 4 OP2 A A 53 69.562 2.629 108.990 1.00 97.14 O
ATOM 5 O5' A A 53 70.704 4.542 110.149 1.00 96.63 O
ATOM 6 C5' A A 53 71.618 5.141 111.087 1.00 93.85 C
ATOM 7 C4' A A 53 71.369 6.625 111.152 1.00 91.44 C
ATOM 8 O4' A A 53 71.669 7.230 109.862 1.00 89.73 O
ATOM 9 C3' A A 53 69.909 6.972 111.379 1.00 90.32 C
ATOM 10 O3' A A 53 69.572 6.893 112.756 1.00 90.22 O
ATOM 11 C2' A A 53 69.821 8.377 110.809 1.00 89.34 C
ATOM 12 O2' A A 53 70.370 9.331 111.693 1.00 90.59 O
ATOM 13 C1' A A 53 70.730 8.255 109.587 1.00 88.42 C
ATOM 14 N9 A A 53 70.009 7.904 108.368 1.00 86.88 N
ATOM 15 C8 A A 53 69.843 6.663 107.802 1.00 87.52 C
ATOM 16 N7 A A 53 69.153 6.677 106.684 1.00 87.14 N
ATOM 17 C5 A A 53 68.840 8.017 106.505 1.00 86.42 C
ATOM 18 C6 A A 53 68.126 8.696 105.500 1.00 85.72 C
ATOM 19 N6 A A 53 67.584 8.095 104.440 1.00 84.53 N
ATOM 20 N1 A A 53 67.990 10.032 105.623 1.00 85.28 N
ATOM 21 C2 A A 53 68.543 10.638 106.685 1.00 85.34 C
ATOM 22 N3 A A 53 69.241 10.112 107.690 1.00 85.80 N
ATOM 23 C4 A A 53 69.356 8.783 107.539 1.00 86.58 C
ATOM 24 P U A 54 68.036 6.747 113.186 1.00 89.31 P
ATOM 25 OP1 U A 54 68.029 6.406 114.633 1.00 89.60 O
ATOM 26 OP2 U A 54 67.378 5.848 112.206 1.00 89.49 O
ATOM 27 O5' U A 54 67.452 8.213 113.010 1.00 90.52 O
TER
ATOM 1 O3' A B 51 73.109 -0.949 104.457 1.00 98.27 O
ATOM 2 P G B 52 71.703 -0.445 105.045 1.00 98.84 P
ATOM 3 OP1 G B 52 71.188 -1.512 105.947 1.00 99.31 O
ATOM 4 OP2 G B 52 70.870 0.018 103.908 1.00 98.13 O
ATOM 5 O5' G B 52 72.114 0.800 105.955 1.00 98.91 O
ATOM 6 C5' G B 52 73.019 0.610 107.067 1.00 98.60 C
ATOM 7 C4' G B 52 73.473 1.939 107.624 1.00 97.94 C
ATOM 8 O4' G B 52 74.056 2.735 106.560 1.00 97.66 O
ATOM 9 C3' G B 52 72.374 2.836 108.168 1.00 97.71 C
ATOM 10 O3' G B 52 71.993 2.496 109.494 1.00 97.90 O
ATOM 11 C2' G B 52 73.033 4.202 108.119 1.00 97.44 C
ATOM 12 O2' G B 52 73.939 4.380 109.192 1.00 97.97 O
ATOM 13 C1' G B 52 73.780 4.112 106.787 1.00 97.29 C
ATOM 14 N9 G B 52 72.983 4.628 105.673 1.00 96.60 N
ATOM 15 C8 G B 52 72.377 3.912 104.666 1.00 96.57 C
ATOM 16 N7 G B 52 71.696 4.663 103.841 1.00 96.28 N
ATOM 17 C5 G B 52 71.866 5.952 104.328 1.00 96.52 C
ATOM 18 C6 G B 52 71.352 7.188 103.854 1.00 96.51 C
ATOM 19 O6 G B 52 70.611 7.391 102.882 1.00 96.58 O
ATOM 20 N1 G B 52 71.777 8.257 104.643 1.00 95.42 N
ATOM 21 C2 G B 52 72.584 8.149 105.748 1.00 95.40 C
ATOM 22 N2 G B 52 72.860 9.282 106.391 1.00 94.50 N
ATOM 23 N3 G B 52 73.076 7.005 106.196 1.00 96.08 N
ATOM 24 C4 G B 52 72.672 5.952 105.446 1.00 96.37 C
ATOM 25 P A B 53 70.558 2.963 110.043 1.00 98.36 P
ATOM 26 OP1 A B 53 70.377 2.438 111.427 1.00 99.11 O
ATOM 27 OP2 A B 53 69.562 2.629 108.990 1.00 97.14 O
ATOM 28 O5' A B 53 70.704 4.542 110.149 1.00 96.63 O
TER
Atoms:
OP1: (70.377,2.438,111.427)
OP2: (69.562,2.629,108.990)
C3': (69.909,6.972,111.379)
C1': (70.730,8.255,109.587)
C5': (71.618,5.141,111.087)
O4': (71.669,7.230,109.862)
C8: (69.843,6.663,107.802)
O2': (70.370,9.331,111.693)
C6: (68.126,8.696,105.500)
C5: (68.840,8.017,106.505)
C4: (69.356,8.783,107.539)
P: (70.558,2.963,110.043)
C4': (71.369,6.625,111.152)
C2': (69.821,8.377,110.809)
C2: (68.543,10.638,106.685)
N1: (67.990,10.032,105.623)
N3: (69.241,10.112,107.690)
N6: (67.584,8.095,104.440)
N7: (69.153,6.677,106.684)
N9: (70.009,7.904,108.368)
O5': (70.704,4.542,110.149)
O3': (69.572,6.893,112.756)
OP2: (69.562,2.629,108.990)
C3': (69.909,6.972,111.379)
C1': (70.730,8.255,109.587)
C5': (71.618,5.141,111.087)
O4': (71.669,7.230,109.862)
C8: (69.843,6.663,107.802)
O2': (70.370,9.331,111.693)
C6: (68.126,8.696,105.500)
C5: (68.840,8.017,106.505)
C4: (69.356,8.783,107.539)
P: (70.558,2.963,110.043)
C4': (71.369,6.625,111.152)
C2': (69.821,8.377,110.809)
C2: (68.543,10.638,106.685)
N1: (67.990,10.032,105.623)
N3: (69.241,10.112,107.690)
N6: (67.584,8.095,104.440)
N7: (69.153,6.677,106.684)
N9: (70.009,7.904,108.368)
O5': (70.704,4.542,110.149)
O3': (69.572,6.893,112.756)
OP1: (71.188,-1.512,105.947)
OP2: (70.870,0.018,103.908)
C3': (72.374,2.836,108.168)
C1': (73.780,4.112,106.787)
C5': (73.019,0.610,107.067)
O6: (70.611,7.391,102.882)
O4': (74.056,2.735,106.560)
C8: (72.377,3.912,104.666)
C2: (72.584,8.149,105.748)
C6: (71.352,7.188,103.854)
C5: (71.866,5.952,104.328)
C4: (72.672,5.952,105.446)
P: (71.703,-0.445,105.045)
C4': (73.473,1.939,107.624)
C2': (73.033,4.202,108.119)
O2': (73.939,4.380,109.192)
N1: (71.777,8.257,104.643)
N2: (72.860,9.282,106.391)
N3: (73.076,7.005,106.196)
N7: (71.696,4.663,103.841)
N9: (72.983,4.628,105.673)
O5': (72.114,0.800,105.955)
O3': (71.993,2.496,109.494)
OP2: (70.870,0.018,103.908)
C3': (72.374,2.836,108.168)
C1': (73.780,4.112,106.787)
C5': (73.019,0.610,107.067)
O6: (70.611,7.391,102.882)
O4': (74.056,2.735,106.560)
C8: (72.377,3.912,104.666)
C2: (72.584,8.149,105.748)
C6: (71.352,7.188,103.854)
C5: (71.866,5.952,104.328)
C4: (72.672,5.952,105.446)
P: (71.703,-0.445,105.045)
C4': (73.473,1.939,107.624)
C2': (73.033,4.202,108.119)
O2': (73.939,4.380,109.192)
N1: (71.777,8.257,104.643)
N2: (72.860,9.282,106.391)
N3: (73.076,7.005,106.196)
N7: (71.696,4.663,103.841)
N9: (72.983,4.628,105.673)
O5': (72.114,0.800,105.955)
O3': (71.993,2.496,109.494)
Image (generated by PyMOL):