Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21129:21128
Extra
PDB:
ATOM 1 O3' G A1128 -75.297 -19.663 73.840 1.00 79.11 O
ATOM 2 P A A1129 -74.815 -21.079 74.434 1.00 70.49 P
ATOM 3 OP1 A A1129 -75.446 -22.153 73.600 1.00 70.78 O
ATOM 4 OP2 A A1129 -75.088 -21.053 75.906 1.00 70.76 O
ATOM 5 O5' A A1129 -73.245 -21.047 74.160 1.00 69.84 O
ATOM 6 C5' A A1129 -72.767 -20.882 72.837 1.00 69.52 C
ATOM 7 C4' A A1129 -71.345 -20.421 72.818 1.00 68.94 C
ATOM 8 O4' A A1129 -71.261 -19.064 73.311 1.00 68.81 O
ATOM 9 C3' A A1129 -70.398 -21.201 73.699 1.00 68.76 C
ATOM 10 O3' A A1129 -69.944 -22.384 73.082 1.00 68.67 O
ATOM 11 C2' A A1129 -69.290 -20.192 73.978 1.00 68.28 C
ATOM 12 O2' A A1129 -68.394 -20.111 72.875 1.00 67.87 O
ATOM 13 C1' A A1129 -70.086 -18.893 74.059 1.00 68.43 C
ATOM 14 N9 A A1129 -70.484 -18.578 75.430 1.00 68.68 N
ATOM 15 C8 A A1129 -71.742 -18.723 75.939 1.00 69.21 C
ATOM 16 N7 A A1129 -71.850 -18.348 77.187 1.00 69.35 N
ATOM 17 C5 A A1129 -70.570 -17.917 77.491 1.00 68.86 C
ATOM 18 C6 A A1129 -70.034 -17.394 78.656 1.00 68.75 C
ATOM 19 N6 A A1129 -70.705 -17.206 79.786 1.00 69.12 N
ATOM 20 N1 A A1129 -68.739 -17.066 78.609 1.00 68.25 N
ATOM 21 C2 A A1129 -68.044 -17.251 77.479 1.00 67.90 C
ATOM 22 N3 A A1129 -68.435 -17.732 76.318 1.00 67.96 N
ATOM 23 C4 A A1129 -69.724 -18.050 76.414 1.00 68.45 C
ATOM 24 P C A1130 -69.686 -23.684 73.963 1.00 73.70 P
ATOM 25 OP1 C A1130 -69.474 -24.820 73.017 1.00 73.68 O
ATOM 26 OP2 C A1130 -70.784 -23.753 74.954 1.00 74.21 O
ATOM 27 O5' C A1130 -68.336 -23.346 74.708 1.00 73.29 O
TER
ATOM 1 O3' U B1127 -79.686 -15.643 77.248 1.00 72.12 O
ATOM 2 P G B1128 -79.052 -17.097 77.511 1.00 80.87 P
ATOM 3 OP1 G B1128 -79.985 -18.093 76.913 1.00 81.32 O
ATOM 4 OP2 G B1128 -78.737 -17.185 78.961 1.00 80.91 O
ATOM 5 O5' G B1128 -77.710 -17.042 76.680 1.00 80.18 O
ATOM 6 C5' G B1128 -77.236 -18.153 75.951 1.00 79.99 C
ATOM 7 C4' G B1128 -76.382 -17.701 74.793 1.00 79.48 C
ATOM 8 O4' G B1128 -75.967 -16.317 74.983 1.00 79.21 O
ATOM 9 C3' G B1128 -75.092 -18.464 74.576 1.00 78.98 C
ATOM 10 O3' G B1128 -75.297 -19.663 73.840 1.00 79.11 O
ATOM 11 C2' G B1128 -74.235 -17.450 73.834 1.00 78.48 C
ATOM 12 O2' G B1128 -74.612 -17.421 72.462 1.00 78.53 O
ATOM 13 C1' G B1128 -74.675 -16.129 74.478 1.00 78.61 C
ATOM 14 N9 G B1128 -73.798 -15.685 75.598 1.00 78.32 N
ATOM 15 C8 G B1128 -74.294 -15.364 76.853 1.00 78.61 C
ATOM 16 N7 G B1128 -73.395 -14.949 77.707 1.00 78.30 N
ATOM 17 C5 G B1128 -72.217 -14.955 76.990 1.00 77.76 C
ATOM 18 C6 G B1128 -70.924 -14.594 77.427 1.00 77.29 C
ATOM 19 O6 G B1128 -70.542 -14.173 78.538 1.00 77.23 O
ATOM 20 N1 G B1128 -70.021 -14.751 76.398 1.00 76.86 N
ATOM 21 C2 G B1128 -70.339 -15.181 75.144 1.00 76.91 C
ATOM 22 N2 G B1128 -69.316 -15.253 74.298 1.00 76.47 N
ATOM 23 N3 G B1128 -71.538 -15.508 74.725 1.00 77.34 N
ATOM 24 C4 G B1128 -72.440 -15.379 75.692 1.00 77.76 C
ATOM 25 P A B1129 -74.815 -21.079 74.434 1.00 70.49 P
ATOM 26 OP1 A B1129 -75.446 -22.153 73.600 1.00 70.78 O
ATOM 27 OP2 A B1129 -75.088 -21.053 75.906 1.00 70.76 O
ATOM 28 O5' A B1129 -73.245 -21.047 74.160 1.00 69.84 O
TER
ATOM 2 P A A1129 -74.815 -21.079 74.434 1.00 70.49 P
ATOM 3 OP1 A A1129 -75.446 -22.153 73.600 1.00 70.78 O
ATOM 4 OP2 A A1129 -75.088 -21.053 75.906 1.00 70.76 O
ATOM 5 O5' A A1129 -73.245 -21.047 74.160 1.00 69.84 O
ATOM 6 C5' A A1129 -72.767 -20.882 72.837 1.00 69.52 C
ATOM 7 C4' A A1129 -71.345 -20.421 72.818 1.00 68.94 C
ATOM 8 O4' A A1129 -71.261 -19.064 73.311 1.00 68.81 O
ATOM 9 C3' A A1129 -70.398 -21.201 73.699 1.00 68.76 C
ATOM 10 O3' A A1129 -69.944 -22.384 73.082 1.00 68.67 O
ATOM 11 C2' A A1129 -69.290 -20.192 73.978 1.00 68.28 C
ATOM 12 O2' A A1129 -68.394 -20.111 72.875 1.00 67.87 O
ATOM 13 C1' A A1129 -70.086 -18.893 74.059 1.00 68.43 C
ATOM 14 N9 A A1129 -70.484 -18.578 75.430 1.00 68.68 N
ATOM 15 C8 A A1129 -71.742 -18.723 75.939 1.00 69.21 C
ATOM 16 N7 A A1129 -71.850 -18.348 77.187 1.00 69.35 N
ATOM 17 C5 A A1129 -70.570 -17.917 77.491 1.00 68.86 C
ATOM 18 C6 A A1129 -70.034 -17.394 78.656 1.00 68.75 C
ATOM 19 N6 A A1129 -70.705 -17.206 79.786 1.00 69.12 N
ATOM 20 N1 A A1129 -68.739 -17.066 78.609 1.00 68.25 N
ATOM 21 C2 A A1129 -68.044 -17.251 77.479 1.00 67.90 C
ATOM 22 N3 A A1129 -68.435 -17.732 76.318 1.00 67.96 N
ATOM 23 C4 A A1129 -69.724 -18.050 76.414 1.00 68.45 C
ATOM 24 P C A1130 -69.686 -23.684 73.963 1.00 73.70 P
ATOM 25 OP1 C A1130 -69.474 -24.820 73.017 1.00 73.68 O
ATOM 26 OP2 C A1130 -70.784 -23.753 74.954 1.00 74.21 O
ATOM 27 O5' C A1130 -68.336 -23.346 74.708 1.00 73.29 O
TER
ATOM 1 O3' U B1127 -79.686 -15.643 77.248 1.00 72.12 O
ATOM 2 P G B1128 -79.052 -17.097 77.511 1.00 80.87 P
ATOM 3 OP1 G B1128 -79.985 -18.093 76.913 1.00 81.32 O
ATOM 4 OP2 G B1128 -78.737 -17.185 78.961 1.00 80.91 O
ATOM 5 O5' G B1128 -77.710 -17.042 76.680 1.00 80.18 O
ATOM 6 C5' G B1128 -77.236 -18.153 75.951 1.00 79.99 C
ATOM 7 C4' G B1128 -76.382 -17.701 74.793 1.00 79.48 C
ATOM 8 O4' G B1128 -75.967 -16.317 74.983 1.00 79.21 O
ATOM 9 C3' G B1128 -75.092 -18.464 74.576 1.00 78.98 C
ATOM 10 O3' G B1128 -75.297 -19.663 73.840 1.00 79.11 O
ATOM 11 C2' G B1128 -74.235 -17.450 73.834 1.00 78.48 C
ATOM 12 O2' G B1128 -74.612 -17.421 72.462 1.00 78.53 O
ATOM 13 C1' G B1128 -74.675 -16.129 74.478 1.00 78.61 C
ATOM 14 N9 G B1128 -73.798 -15.685 75.598 1.00 78.32 N
ATOM 15 C8 G B1128 -74.294 -15.364 76.853 1.00 78.61 C
ATOM 16 N7 G B1128 -73.395 -14.949 77.707 1.00 78.30 N
ATOM 17 C5 G B1128 -72.217 -14.955 76.990 1.00 77.76 C
ATOM 18 C6 G B1128 -70.924 -14.594 77.427 1.00 77.29 C
ATOM 19 O6 G B1128 -70.542 -14.173 78.538 1.00 77.23 O
ATOM 20 N1 G B1128 -70.021 -14.751 76.398 1.00 76.86 N
ATOM 21 C2 G B1128 -70.339 -15.181 75.144 1.00 76.91 C
ATOM 22 N2 G B1128 -69.316 -15.253 74.298 1.00 76.47 N
ATOM 23 N3 G B1128 -71.538 -15.508 74.725 1.00 77.34 N
ATOM 24 C4 G B1128 -72.440 -15.379 75.692 1.00 77.76 C
ATOM 25 P A B1129 -74.815 -21.079 74.434 1.00 70.49 P
ATOM 26 OP1 A B1129 -75.446 -22.153 73.600 1.00 70.78 O
ATOM 27 OP2 A B1129 -75.088 -21.053 75.906 1.00 70.76 O
ATOM 28 O5' A B1129 -73.245 -21.047 74.160 1.00 69.84 O
TER
Atoms:
OP1: (-75.446,-22.153,73.600)
OP2: (-75.088,-21.053,75.906)
C3': (-70.398,-21.201,73.699)
C1': (-70.086,-18.893,74.059)
C5': (-72.767,-20.882,72.837)
O4': (-71.261,-19.064,73.311)
C8: (-71.742,-18.723,75.939)
O2': (-68.394,-20.111,72.875)
C6: (-70.034,-17.394,78.656)
C5: (-70.570,-17.917,77.491)
C4: (-69.724,-18.050,76.414)
P: (-74.815,-21.079,74.434)
C4': (-71.345,-20.421,72.818)
C2': (-69.290,-20.192,73.978)
C2: (-68.044,-17.251,77.479)
N1: (-68.739,-17.066,78.609)
N3: (-68.435,-17.732,76.318)
N6: (-70.705,-17.206,79.786)
N7: (-71.850,-18.348,77.187)
N9: (-70.484,-18.578,75.430)
O5': (-73.245,-21.047,74.160)
O3': (-69.944,-22.384,73.082)
OP2: (-75.088,-21.053,75.906)
C3': (-70.398,-21.201,73.699)
C1': (-70.086,-18.893,74.059)
C5': (-72.767,-20.882,72.837)
O4': (-71.261,-19.064,73.311)
C8: (-71.742,-18.723,75.939)
O2': (-68.394,-20.111,72.875)
C6: (-70.034,-17.394,78.656)
C5: (-70.570,-17.917,77.491)
C4: (-69.724,-18.050,76.414)
P: (-74.815,-21.079,74.434)
C4': (-71.345,-20.421,72.818)
C2': (-69.290,-20.192,73.978)
C2: (-68.044,-17.251,77.479)
N1: (-68.739,-17.066,78.609)
N3: (-68.435,-17.732,76.318)
N6: (-70.705,-17.206,79.786)
N7: (-71.850,-18.348,77.187)
N9: (-70.484,-18.578,75.430)
O5': (-73.245,-21.047,74.160)
O3': (-69.944,-22.384,73.082)
OP1: (-79.985,-18.093,76.913)
OP2: (-78.737,-17.185,78.961)
C3': (-75.092,-18.464,74.576)
C1': (-74.675,-16.129,74.478)
C5': (-77.236,-18.153,75.951)
O6: (-70.542,-14.173,78.538)
O4': (-75.967,-16.317,74.983)
C8: (-74.294,-15.364,76.853)
C2: (-70.339,-15.181,75.144)
C6: (-70.924,-14.594,77.427)
C5: (-72.217,-14.955,76.990)
C4: (-72.440,-15.379,75.692)
P: (-79.052,-17.097,77.511)
C4': (-76.382,-17.701,74.793)
C2': (-74.235,-17.450,73.834)
O2': (-74.612,-17.421,72.462)
N1: (-70.021,-14.751,76.398)
N2: (-69.316,-15.253,74.298)
N3: (-71.538,-15.508,74.725)
N7: (-73.395,-14.949,77.707)
N9: (-73.798,-15.685,75.598)
O5': (-77.710,-17.042,76.680)
O3': (-75.297,-19.663,73.840)
OP2: (-78.737,-17.185,78.961)
C3': (-75.092,-18.464,74.576)
C1': (-74.675,-16.129,74.478)
C5': (-77.236,-18.153,75.951)
O6: (-70.542,-14.173,78.538)
O4': (-75.967,-16.317,74.983)
C8: (-74.294,-15.364,76.853)
C2: (-70.339,-15.181,75.144)
C6: (-70.924,-14.594,77.427)
C5: (-72.217,-14.955,76.990)
C4: (-72.440,-15.379,75.692)
P: (-79.052,-17.097,77.511)
C4': (-76.382,-17.701,74.793)
C2': (-74.235,-17.450,73.834)
O2': (-74.612,-17.421,72.462)
N1: (-70.021,-14.751,76.398)
N2: (-69.316,-15.253,74.298)
N3: (-71.538,-15.508,74.725)
N7: (-73.395,-14.949,77.707)
N9: (-73.798,-15.685,75.598)
O5': (-77.710,-17.042,76.680)
O3': (-75.297,-19.663,73.840)
Image (generated by PyMOL):