ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A1308:A1307

Extra

PDB:
ATOM 1 O3' G A1307 -161.739 5.460 9.279 1.00 35.85 O
ATOM 2 P G A1308 -162.490 6.005 7.984 1.00 49.42 P
ATOM 3 OP1 G A1308 -162.923 4.814 7.201 1.00 49.42 O
ATOM 4 OP2 G A1308 -161.592 6.994 7.341 1.00 49.42 O
ATOM 5 O5' G A1308 -163.752 6.742 8.610 1.00 49.42 O
ATOM 6 C5' G A1308 -164.778 5.996 9.236 1.00 49.42 C
ATOM 7 C4' G A1308 -165.601 6.856 10.145 1.00 49.42 C
ATOM 8 O4' G A1308 -164.729 7.614 11.013 1.00 49.42 O
ATOM 9 C3' G A1308 -166.447 7.924 9.474 1.00 49.42 C
ATOM 10 O3' G A1308 -167.640 7.417 8.898 1.00 49.42 O
ATOM 11 C2' G A1308 -166.682 8.901 10.615 1.00 49.42 C
ATOM 12 O2' G A1308 -167.679 8.423 11.498 1.00 49.42 O
ATOM 13 C1' G A1308 -165.337 8.850 11.331 1.00 49.42 C
ATOM 14 N9 G A1308 -164.457 9.941 10.895 1.00 49.72 N
ATOM 15 C8 G A1308 -163.290 9.910 10.161 1.00 49.72 C
ATOM 16 N7 G A1308 -162.799 11.103 9.943 1.00 49.72 N
ATOM 17 C5 G A1308 -163.705 11.948 10.567 1.00 49.72 C
ATOM 18 C6 G A1308 -163.708 13.346 10.674 1.00 49.72 C
ATOM 19 O6 G A1308 -162.876 14.136 10.222 1.00 49.72 O
ATOM 20 N1 G A1308 -164.814 13.787 11.386 1.00 49.72 N
ATOM 21 C2 G A1308 -165.795 12.986 11.924 1.00 49.72 C
ATOM 22 N2 G A1308 -166.793 13.594 12.580 1.00 49.72 N
ATOM 23 N3 G A1308 -165.804 11.676 11.836 1.00 49.72 N
ATOM 24 C4 G A1308 -164.732 11.248 11.151 1.00 49.72 C
ATOM 25 P A A1309 -168.128 7.937 7.454 1.00 52.53 P
ATOM 26 OP1 A A1309 -169.123 6.954 6.949 1.00 52.53 O
ATOM 27 OP2 A A1309 -166.911 8.204 6.644 1.00 52.53 O
ATOM 28 O5' A A1309 -168.845 9.307 7.799 1.00 52.53 O
TER

ATOM 1 O3' U B1306 -155.886 6.764 8.456 1.00 32.91 O
ATOM 2 P G B1307 -157.348 6.986 7.834 1.00 35.85 P
ATOM 3 OP1 G B1307 -157.609 5.851 6.927 1.00 35.85 O
ATOM 4 OP2 G B1307 -157.383 8.356 7.272 1.00 35.85 O
ATOM 5 O5' G B1307 -158.300 6.900 9.115 1.00 35.85 O
ATOM 6 C5' G B1307 -158.581 5.654 9.729 1.00 35.85 C
ATOM 7 C4' G B1307 -159.764 5.732 10.665 1.00 35.85 C
ATOM 8 O4' G B1307 -159.456 6.569 11.808 1.00 35.85 O
ATOM 9 C3' G B1307 -161.025 6.348 10.101 1.00 35.85 C
ATOM 10 O3' G B1307 -161.739 5.460 9.279 1.00 35.85 O
ATOM 11 C2' G B1307 -161.775 6.749 11.358 1.00 35.85 C
ATOM 12 O2' G B1307 -162.382 5.624 11.971 1.00 35.85 O
ATOM 13 C1' G B1307 -160.629 7.229 12.240 1.00 35.85 C
ATOM 14 N9 G B1307 -160.421 8.653 12.072 1.00 36.24 N
ATOM 15 C8 G B1307 -159.571 9.182 11.157 1.00 36.24 C
ATOM 16 N7 G B1307 -159.591 10.479 11.167 1.00 36.24 N
ATOM 17 C5 G B1307 -160.520 10.802 12.139 1.00 36.24 C
ATOM 18 C6 G B1307 -160.947 12.073 12.574 1.00 36.24 C
ATOM 19 O6 G B1307 -160.550 13.167 12.154 1.00 36.24 O
ATOM 20 N1 G B1307 -161.914 11.959 13.577 1.00 36.24 N
ATOM 21 C2 G B1307 -162.390 10.763 14.081 1.00 36.24 C
ATOM 22 N2 G B1307 -163.319 10.846 15.043 1.00 36.24 N
ATOM 23 N3 G B1307 -161.987 9.563 13.677 1.00 36.24 N
ATOM 24 C4 G B1307 -161.057 9.670 12.709 1.00 36.24 C
ATOM 25 P G B1308 -162.490 6.005 7.984 1.00 49.42 P
ATOM 26 OP1 G B1308 -162.923 4.814 7.201 1.00 49.42 O
ATOM 27 OP2 G B1308 -161.592 6.994 7.341 1.00 49.42 O
ATOM 28 O5' G B1308 -163.752 6.742 8.610 1.00 49.42 O
TER

Atoms:
OP1: (-162.923,4.814,7.201)
OP2: (-161.592,6.994,7.341)
C3': (-166.447,7.924,9.474)
C1': (-165.337,8.850,11.331)
C5': (-164.778,5.996,9.236)
O6: (-162.876,14.136,10.222)
O4': (-164.729,7.614,11.013)
C8: (-163.290,9.910,10.161)
C2: (-165.795,12.986,11.924)
C6: (-163.708,13.346,10.674)
C5: (-163.705,11.948,10.567)
C4: (-164.732,11.248,11.151)
P: (-162.490,6.005,7.984)
C4': (-165.601,6.856,10.145)
C2': (-166.682,8.901,10.615)
O2': (-167.679,8.423,11.498)
N1: (-164.814,13.787,11.386)
N2: (-166.793,13.594,12.580)
N3: (-165.804,11.676,11.836)
N7: (-162.799,11.103,9.943)
N9: (-164.457,9.941,10.895)
O5': (-163.752,6.742,8.610)
O3': (-167.640,7.417,8.898)
OP1: (-157.609,5.851,6.927)
OP2: (-157.383,8.356,7.272)
C3': (-161.025,6.348,10.101)
C1': (-160.629,7.229,12.240)
C5': (-158.581,5.654,9.729)
O6: (-160.550,13.167,12.154)
O4': (-159.456,6.569,11.808)
C8: (-159.571,9.182,11.157)
C2: (-162.390,10.763,14.081)
C6: (-160.947,12.073,12.574)
C5: (-160.520,10.802,12.139)
C4: (-161.057,9.670,12.709)
P: (-157.348,6.986,7.834)
C4': (-159.764,5.732,10.665)
C2': (-161.775,6.749,11.358)
O2': (-162.382,5.624,11.971)
N1: (-161.914,11.959,13.577)
N2: (-163.319,10.846,15.043)
N3: (-161.987,9.563,13.677)
N7: (-159.591,10.479,11.167)
N9: (-160.421,8.653,12.072)
O5': (-158.300,6.900,9.115)
O3': (-161.739,5.460,9.279)
Image (generated by PyMOL):
PyMOL image
show in jmol