ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NZ4:S140:S139

Extra

PDB:
ATOM 1 O3' G A 139 12.678 -35.036 90.919 1.00102.54 O
ATOM 2 P A A 140 13.930 -36.030 90.749 1.00102.75 P
ATOM 3 OP1 A A 140 13.439 -37.406 90.993 1.00102.60 O
ATOM 4 OP2 A A 140 15.067 -35.507 91.543 1.00102.70 O
ATOM 5 O5' A A 140 14.270 -35.904 89.186 1.00102.69 O
ATOM 6 C5' A A 140 15.454 -36.471 88.612 1.00102.49 C
ATOM 7 C4' A A 140 15.948 -35.650 87.426 1.00102.43 C
ATOM 8 O4' A A 140 15.771 -34.241 87.713 1.00102.19 O
ATOM 9 C3' A A 140 17.422 -35.844 87.069 1.00102.33 C
ATOM 10 O3' A A 140 17.546 -36.712 85.938 1.00102.35 O
ATOM 11 C2' A A 140 17.967 -34.436 86.794 1.00102.26 C
ATOM 12 O2' A A 140 18.063 -34.097 85.422 1.00102.28 O
ATOM 13 C1' A A 140 16.965 -33.519 87.490 1.00102.17 C
ATOM 14 N9 A A 140 17.444 -33.007 88.770 1.00102.20 N
ATOM 15 C8 A A 140 17.302 -33.568 90.013 1.00102.10 C
ATOM 16 N7 A A 140 17.844 -32.863 90.980 1.00102.12 N
ATOM 17 C5 A A 140 18.377 -31.764 90.318 1.00102.10 C
ATOM 18 C6 A A 140 19.087 -30.629 90.763 1.00102.05 C
ATOM 19 N6 A A 140 19.395 -30.416 92.046 1.00102.10 N
ATOM 20 N1 A A 140 19.475 -29.720 89.837 1.00102.13 N
ATOM 21 C2 A A 140 19.171 -29.933 88.549 1.00102.07 C
ATOM 22 N3 A A 140 18.508 -30.958 88.011 1.00102.07 N
ATOM 23 C4 A A 140 18.138 -31.840 88.957 1.00102.06 C
TER

ATOM 1 O3' U B 138 10.492 -32.648 96.869 1.00101.51 O
ATOM 2 P G B 139 11.247 -33.669 95.891 1.00101.78 P
ATOM 3 OP1 G B 139 10.573 -34.980 96.007 1.00101.94 O
ATOM 4 OP2 G B 139 12.703 -33.574 96.140 1.00101.77 O
ATOM 5 O5' G B 139 10.919 -33.084 94.438 1.00101.96 O
ATOM 6 C5' G B 139 10.829 -33.940 93.300 1.00102.15 C
ATOM 7 C4' G B 139 11.406 -33.275 92.062 1.00102.29 C
ATOM 8 O4' G B 139 11.621 -31.857 92.299 1.00102.45 O
ATOM 9 C3' G B 139 12.773 -33.790 91.626 1.00102.40 C
ATOM 10 O3' G B 139 12.678 -35.036 90.919 1.00102.54 O
ATOM 11 C2' G B 139 13.241 -32.622 90.759 1.00102.40 C
ATOM 12 O2' G B 139 12.643 -32.584 89.476 1.00102.12 O
ATOM 13 C1' G B 139 12.790 -31.440 91.617 1.00102.31 C
ATOM 14 N9 G B 139 13.813 -31.035 92.578 1.00102.27 N
ATOM 15 C8 G B 139 13.946 -31.401 93.895 1.00102.27 C
ATOM 16 N7 G B 139 14.982 -30.871 94.484 1.00102.31 N
ATOM 17 C5 G B 139 15.582 -30.106 93.492 1.00102.29 C
ATOM 18 C6 G B 139 16.747 -29.293 93.524 1.00102.33 C
ATOM 19 O6 G B 139 17.512 -29.082 94.477 1.00102.23 O
ATOM 20 N1 G B 139 16.994 -28.690 92.286 1.00102.39 N
ATOM 21 C2 G B 139 16.211 -28.859 91.161 1.00102.37 C
ATOM 22 N2 G B 139 16.587 -28.214 90.052 1.00102.30 N
ATOM 23 N3 G B 139 15.122 -29.615 91.120 1.00102.31 N
ATOM 24 C4 G B 139 14.871 -30.203 92.315 1.00102.30 C
ATOM 25 P A B 140 13.930 -36.030 90.749 1.00102.75 P
ATOM 26 OP1 A B 140 13.439 -37.406 90.993 1.00102.60 O
ATOM 27 OP2 A B 140 15.067 -35.507 91.543 1.00102.70 O
ATOM 28 O5' A B 140 14.270 -35.904 89.186 1.00102.69 O
TER

Atoms:
OP1: (13.439,-37.406,90.993)
OP2: (15.067,-35.507,91.543)
C3': (17.422,-35.844,87.069)
C1': (16.965,-33.519,87.490)
C5': (15.454,-36.471,88.612)
O4': (15.771,-34.241,87.713)
C8: (17.302,-33.568,90.013)
O2': (18.063,-34.097,85.422)
C6: (19.087,-30.629,90.763)
C5: (18.377,-31.764,90.318)
C4: (18.138,-31.840,88.957)
P: (13.930,-36.030,90.749)
C4': (15.948,-35.650,87.426)
C2': (17.967,-34.436,86.794)
C2: (19.171,-29.933,88.549)
N1: (19.475,-29.720,89.837)
N3: (18.508,-30.958,88.011)
N6: (19.395,-30.416,92.046)
N7: (17.844,-32.863,90.980)
N9: (17.444,-33.007,88.770)
O5': (14.270,-35.904,89.186)
O3': (17.546,-36.712,85.938)
OP1: (10.573,-34.980,96.007)
OP2: (12.703,-33.574,96.140)
C3': (12.773,-33.790,91.626)
C1': (12.790,-31.440,91.617)
C5': (10.829,-33.940,93.300)
O6: (17.512,-29.082,94.477)
O4': (11.621,-31.857,92.299)
C8: (13.946,-31.401,93.895)
C2: (16.211,-28.859,91.161)
C6: (16.747,-29.293,93.524)
C5: (15.582,-30.106,93.492)
C4: (14.871,-30.203,92.315)
P: (11.247,-33.669,95.891)
C4': (11.406,-33.275,92.062)
C2': (13.241,-32.622,90.759)
O2': (12.643,-32.584,89.476)
N1: (16.994,-28.690,92.286)
N2: (16.587,-28.214,90.052)
N3: (15.122,-29.615,91.120)
N7: (14.982,-30.871,94.484)
N9: (13.813,-31.035,92.578)
O5': (10.919,-33.084,94.438)
O3': (12.678,-35.036,90.919)
Image (generated by PyMOL):
PyMOL image
show in jmol