Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GCV:B121:B120
Extra
PDB:
ATOM 1 O3' G A 120 1.593 -10.202 -10.429 1.00 58.31 O
ATOM 2 P A A 121 0.075 -10.190 -9.895 1.00 60.09 P
ATOM 3 OP1 A A 121 -0.546 -11.459 -10.357 1.00 60.72 O
ATOM 4 OP2 A A 121 -0.555 -8.891 -10.246 1.00 59.08 O
ATOM 5 O5' A A 121 0.216 -10.262 -8.311 1.00 59.42 O
ATOM 6 C5' A A 121 0.989 -11.286 -7.700 1.00 60.36 C
ATOM 7 C4' A A 121 1.097 -11.041 -6.217 1.00 61.02 C
ATOM 8 O4' A A 121 1.843 -9.826 -5.962 1.00 60.17 O
ATOM 9 C3' A A 121 -0.223 -10.795 -5.518 1.00 62.93 C
ATOM 10 O3' A A 121 -0.866 -12.032 -5.250 1.00 67.99 O
ATOM 11 C2' A A 121 0.212 -10.076 -4.245 1.00 61.31 C
ATOM 12 O2' A A 121 0.692 -10.957 -3.248 1.00 61.30 O
ATOM 13 C1' A A 121 1.382 -9.238 -4.756 1.00 59.14 C
ATOM 14 N9 A A 121 1.073 -7.829 -5.000 1.00 55.43 N
ATOM 15 C8 A A 121 0.776 -7.200 -6.186 1.00 54.46 C
ATOM 16 N7 A A 121 0.620 -5.902 -6.071 1.00 52.56 N
ATOM 17 C5 A A 121 0.812 -5.663 -4.716 1.00 52.11 C
ATOM 18 C6 A A 121 0.795 -4.484 -3.950 1.00 50.78 C
ATOM 19 N6 A A 121 0.571 -3.272 -4.461 1.00 51.80 N
ATOM 20 N1 A A 121 1.019 -4.593 -2.622 1.00 51.21 N
ATOM 21 C2 A A 121 1.247 -5.809 -2.111 1.00 52.13 C
ATOM 22 N3 A A 121 1.297 -6.988 -2.727 1.00 52.22 N
ATOM 23 C4 A A 121 1.070 -6.843 -4.043 1.00 53.46 C
TER
ATOM 1 O3' G B 119 4.315 -6.278 -14.462 1.00 57.66 O
ATOM 2 P G B 120 2.787 -6.359 -13.967 1.00 60.72 P
ATOM 3 OP1 G B 120 2.061 -7.163 -14.986 1.00 60.69 O
ATOM 4 OP2 G B 120 2.319 -4.983 -13.647 1.00 58.35 O
ATOM 5 O5' G B 120 2.857 -7.196 -12.607 1.00 58.29 O
ATOM 6 C5' G B 120 3.320 -8.543 -12.610 1.00 56.74 C
ATOM 7 C4' G B 120 3.586 -9.035 -11.201 1.00 55.90 C
ATOM 8 O4' G B 120 4.542 -8.165 -10.538 1.00 54.97 O
ATOM 9 C3' G B 120 2.427 -9.069 -10.217 1.00 55.94 C
ATOM 10 O3' G B 120 1.593 -10.202 -10.429 1.00 58.31 O
ATOM 11 C2' G B 120 3.169 -9.183 -8.890 1.00 54.36 C
ATOM 12 O2' G B 120 3.651 -10.486 -8.628 1.00 52.82 O
ATOM 13 C1' G B 120 4.357 -8.253 -9.131 1.00 52.51 C
ATOM 14 N9 G B 120 4.093 -6.922 -8.602 1.00 48.53 N
ATOM 15 C8 G B 120 3.771 -5.786 -9.305 1.00 48.01 C
ATOM 16 N7 G B 120 3.573 -4.749 -8.536 1.00 44.67 N
ATOM 17 C5 G B 120 3.779 -5.231 -7.251 1.00 42.16 C
ATOM 18 C6 G B 120 3.706 -4.568 -6.000 1.00 40.47 C
ATOM 19 O6 G B 120 3.434 -3.383 -5.772 1.00 39.95 O
ATOM 20 N1 G B 120 3.990 -5.433 -4.946 1.00 38.30 N
ATOM 21 C2 G B 120 4.306 -6.765 -5.080 1.00 40.77 C
ATOM 22 N2 G B 120 4.549 -7.439 -3.943 1.00 37.82 N
ATOM 23 N3 G B 120 4.378 -7.392 -6.242 1.00 41.92 N
ATOM 24 C4 G B 120 4.105 -6.569 -7.276 1.00 44.91 C
ATOM 25 P A B 121 0.075 -10.190 -9.895 1.00 60.09 P
ATOM 26 OP1 A B 121 -0.546 -11.459 -10.357 1.00 60.72 O
ATOM 27 OP2 A B 121 -0.555 -8.891 -10.246 1.00 59.08 O
ATOM 28 O5' A B 121 0.216 -10.262 -8.311 1.00 59.42 O
TER
ATOM 2 P A A 121 0.075 -10.190 -9.895 1.00 60.09 P
ATOM 3 OP1 A A 121 -0.546 -11.459 -10.357 1.00 60.72 O
ATOM 4 OP2 A A 121 -0.555 -8.891 -10.246 1.00 59.08 O
ATOM 5 O5' A A 121 0.216 -10.262 -8.311 1.00 59.42 O
ATOM 6 C5' A A 121 0.989 -11.286 -7.700 1.00 60.36 C
ATOM 7 C4' A A 121 1.097 -11.041 -6.217 1.00 61.02 C
ATOM 8 O4' A A 121 1.843 -9.826 -5.962 1.00 60.17 O
ATOM 9 C3' A A 121 -0.223 -10.795 -5.518 1.00 62.93 C
ATOM 10 O3' A A 121 -0.866 -12.032 -5.250 1.00 67.99 O
ATOM 11 C2' A A 121 0.212 -10.076 -4.245 1.00 61.31 C
ATOM 12 O2' A A 121 0.692 -10.957 -3.248 1.00 61.30 O
ATOM 13 C1' A A 121 1.382 -9.238 -4.756 1.00 59.14 C
ATOM 14 N9 A A 121 1.073 -7.829 -5.000 1.00 55.43 N
ATOM 15 C8 A A 121 0.776 -7.200 -6.186 1.00 54.46 C
ATOM 16 N7 A A 121 0.620 -5.902 -6.071 1.00 52.56 N
ATOM 17 C5 A A 121 0.812 -5.663 -4.716 1.00 52.11 C
ATOM 18 C6 A A 121 0.795 -4.484 -3.950 1.00 50.78 C
ATOM 19 N6 A A 121 0.571 -3.272 -4.461 1.00 51.80 N
ATOM 20 N1 A A 121 1.019 -4.593 -2.622 1.00 51.21 N
ATOM 21 C2 A A 121 1.247 -5.809 -2.111 1.00 52.13 C
ATOM 22 N3 A A 121 1.297 -6.988 -2.727 1.00 52.22 N
ATOM 23 C4 A A 121 1.070 -6.843 -4.043 1.00 53.46 C
TER
ATOM 1 O3' G B 119 4.315 -6.278 -14.462 1.00 57.66 O
ATOM 2 P G B 120 2.787 -6.359 -13.967 1.00 60.72 P
ATOM 3 OP1 G B 120 2.061 -7.163 -14.986 1.00 60.69 O
ATOM 4 OP2 G B 120 2.319 -4.983 -13.647 1.00 58.35 O
ATOM 5 O5' G B 120 2.857 -7.196 -12.607 1.00 58.29 O
ATOM 6 C5' G B 120 3.320 -8.543 -12.610 1.00 56.74 C
ATOM 7 C4' G B 120 3.586 -9.035 -11.201 1.00 55.90 C
ATOM 8 O4' G B 120 4.542 -8.165 -10.538 1.00 54.97 O
ATOM 9 C3' G B 120 2.427 -9.069 -10.217 1.00 55.94 C
ATOM 10 O3' G B 120 1.593 -10.202 -10.429 1.00 58.31 O
ATOM 11 C2' G B 120 3.169 -9.183 -8.890 1.00 54.36 C
ATOM 12 O2' G B 120 3.651 -10.486 -8.628 1.00 52.82 O
ATOM 13 C1' G B 120 4.357 -8.253 -9.131 1.00 52.51 C
ATOM 14 N9 G B 120 4.093 -6.922 -8.602 1.00 48.53 N
ATOM 15 C8 G B 120 3.771 -5.786 -9.305 1.00 48.01 C
ATOM 16 N7 G B 120 3.573 -4.749 -8.536 1.00 44.67 N
ATOM 17 C5 G B 120 3.779 -5.231 -7.251 1.00 42.16 C
ATOM 18 C6 G B 120 3.706 -4.568 -6.000 1.00 40.47 C
ATOM 19 O6 G B 120 3.434 -3.383 -5.772 1.00 39.95 O
ATOM 20 N1 G B 120 3.990 -5.433 -4.946 1.00 38.30 N
ATOM 21 C2 G B 120 4.306 -6.765 -5.080 1.00 40.77 C
ATOM 22 N2 G B 120 4.549 -7.439 -3.943 1.00 37.82 N
ATOM 23 N3 G B 120 4.378 -7.392 -6.242 1.00 41.92 N
ATOM 24 C4 G B 120 4.105 -6.569 -7.276 1.00 44.91 C
ATOM 25 P A B 121 0.075 -10.190 -9.895 1.00 60.09 P
ATOM 26 OP1 A B 121 -0.546 -11.459 -10.357 1.00 60.72 O
ATOM 27 OP2 A B 121 -0.555 -8.891 -10.246 1.00 59.08 O
ATOM 28 O5' A B 121 0.216 -10.262 -8.311 1.00 59.42 O
TER
Atoms:
OP1: (-0.546,-11.459,-10.357)
OP2: (-0.555,-8.891,-10.246)
C3': (-0.223,-10.795,-5.518)
C1': (1.382,-9.238,-4.756)
C5': (0.989,-11.286,-7.700)
O4': (1.843,-9.826,-5.962)
C8: (0.776,-7.200,-6.186)
O2': (0.692,-10.957,-3.248)
C6: (0.795,-4.484,-3.950)
C5: (0.812,-5.663,-4.716)
C4: (1.070,-6.843,-4.043)
P: (0.075,-10.190,-9.895)
C4': (1.097,-11.041,-6.217)
C2': (0.212,-10.076,-4.245)
C2: (1.247,-5.809,-2.111)
N1: (1.019,-4.593,-2.622)
N3: (1.297,-6.988,-2.727)
N6: (0.571,-3.272,-4.461)
N7: (0.620,-5.902,-6.071)
N9: (1.073,-7.829,-5.000)
O5': (0.216,-10.262,-8.311)
O3': (-0.866,-12.032,-5.250)
OP2: (-0.555,-8.891,-10.246)
C3': (-0.223,-10.795,-5.518)
C1': (1.382,-9.238,-4.756)
C5': (0.989,-11.286,-7.700)
O4': (1.843,-9.826,-5.962)
C8: (0.776,-7.200,-6.186)
O2': (0.692,-10.957,-3.248)
C6: (0.795,-4.484,-3.950)
C5: (0.812,-5.663,-4.716)
C4: (1.070,-6.843,-4.043)
P: (0.075,-10.190,-9.895)
C4': (1.097,-11.041,-6.217)
C2': (0.212,-10.076,-4.245)
C2: (1.247,-5.809,-2.111)
N1: (1.019,-4.593,-2.622)
N3: (1.297,-6.988,-2.727)
N6: (0.571,-3.272,-4.461)
N7: (0.620,-5.902,-6.071)
N9: (1.073,-7.829,-5.000)
O5': (0.216,-10.262,-8.311)
O3': (-0.866,-12.032,-5.250)
OP1: (2.061,-7.163,-14.986)
OP2: (2.319,-4.983,-13.647)
C3': (2.427,-9.069,-10.217)
C1': (4.357,-8.253,-9.131)
C5': (3.320,-8.543,-12.610)
O6: (3.434,-3.383,-5.772)
O4': (4.542,-8.165,-10.538)
C8: (3.771,-5.786,-9.305)
C2: (4.306,-6.765,-5.080)
C6: (3.706,-4.568,-6.000)
C5: (3.779,-5.231,-7.251)
C4: (4.105,-6.569,-7.276)
P: (2.787,-6.359,-13.967)
C4': (3.586,-9.035,-11.201)
C2': (3.169,-9.183,-8.890)
O2': (3.651,-10.486,-8.628)
N1: (3.990,-5.433,-4.946)
N2: (4.549,-7.439,-3.943)
N3: (4.378,-7.392,-6.242)
N7: (3.573,-4.749,-8.536)
N9: (4.093,-6.922,-8.602)
O5': (2.857,-7.196,-12.607)
O3': (1.593,-10.202,-10.429)
OP2: (2.319,-4.983,-13.647)
C3': (2.427,-9.069,-10.217)
C1': (4.357,-8.253,-9.131)
C5': (3.320,-8.543,-12.610)
O6: (3.434,-3.383,-5.772)
O4': (4.542,-8.165,-10.538)
C8: (3.771,-5.786,-9.305)
C2: (4.306,-6.765,-5.080)
C6: (3.706,-4.568,-6.000)
C5: (3.779,-5.231,-7.251)
C4: (4.105,-6.569,-7.276)
P: (2.787,-6.359,-13.967)
C4': (3.586,-9.035,-11.201)
C2': (3.169,-9.183,-8.890)
O2': (3.651,-10.486,-8.628)
N1: (3.990,-5.433,-4.946)
N2: (4.549,-7.439,-3.943)
N3: (4.378,-7.392,-6.242)
N7: (3.573,-4.749,-8.536)
N9: (4.093,-6.922,-8.602)
O5': (2.857,-7.196,-12.607)
O3': (1.593,-10.202,-10.429)
Image (generated by PyMOL):