Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SDR:C10:C9
Extra
PDB:
ATOM 1 O3' G A 9 -8.905 3.544 26.461 1.00 25.04 O
ATOM 2 P A A 10 -9.232 5.163 26.540 1.00 26.30 P
ATOM 3 OP1 A A 10 -10.334 5.296 27.503 1.00 27.59 O
ATOM 4 OP2 A A 10 -9.448 5.689 25.162 1.00 21.15 O
ATOM 5 O5' A A 10 -7.934 5.874 27.208 1.00 20.47 O
ATOM 6 C5' A A 10 -7.769 5.700 28.631 1.00 22.03 C
ATOM 7 C4' A A 10 -6.303 5.780 29.156 1.00 22.47 C
ATOM 8 O4' A A 10 -5.426 5.235 28.153 1.00 22.85 O
ATOM 9 C3' A A 10 -5.581 7.097 29.412 1.00 19.91 C
ATOM 10 O3' A A 10 -5.973 7.887 30.540 1.00 19.50 O
ATOM 11 C2' A A 10 -4.125 6.657 29.544 1.00 18.08 C
ATOM 12 O2' A A 10 -3.758 6.114 30.830 1.00 20.88 O
ATOM 13 C1' A A 10 -4.080 5.582 28.506 1.00 14.08 C
ATOM 14 N9 A A 10 -3.406 5.894 27.281 1.00 8.64 N
ATOM 15 C8 A A 10 -3.926 5.958 26.002 1.00 7.83 C
ATOM 16 N7 A A 10 -3.022 6.225 25.090 1.00 10.12 N
ATOM 17 C5 A A 10 -1.836 6.342 25.839 1.00 7.72 C
ATOM 18 C6 A A 10 -0.523 6.627 25.472 1.00 5.72 C
ATOM 19 N6 A A 10 -0.163 6.856 24.216 1.00 9.65 N
ATOM 20 N1 A A 10 0.392 6.667 26.432 1.00 6.64 N
ATOM 21 C2 A A 10 0.014 6.443 27.695 1.00 8.06 C
ATOM 22 N3 A A 10 -1.198 6.169 28.172 1.00 7.37 N
ATOM 23 C4 A A 10 -2.078 6.130 27.166 1.00 6.11 C
ATOM 24 P U A 11 -5.939 9.512 30.404 1.00 15.44 P
ATOM 25 OP1 U A 11 -6.565 10.030 31.640 1.00 15.44 O
ATOM 26 OP2 U A 11 -6.481 9.877 29.094 1.00 6.98 O
ATOM 27 O5' U A 11 -4.346 9.871 30.364 1.00 10.18 O
TER
ATOM 1 O3' U B 8 -8.416 0.844 21.230 1.00 20.45 O
ATOM 2 P G B 9 -8.794 2.441 21.242 1.00 14.23 P
ATOM 3 OP1 G B 9 -9.658 2.644 20.058 1.00 14.73 O
ATOM 4 OP2 G B 9 -7.582 3.283 21.368 1.00 16.67 O
ATOM 5 O5' G B 9 -9.644 2.663 22.554 1.00 12.29 O
ATOM 6 C5' G B 9 -9.676 1.833 23.706 1.00 14.98 C
ATOM 7 C4' G B 9 -8.465 1.778 24.650 1.00 15.11 C
ATOM 8 O4' G B 9 -7.266 1.424 23.966 1.00 13.00 O
ATOM 9 C3' G B 9 -8.023 2.972 25.457 1.00 17.87 C
ATOM 10 O3' G B 9 -8.905 3.544 26.461 1.00 25.04 O
ATOM 11 C2' G B 9 -6.768 2.370 26.091 1.00 15.03 C
ATOM 12 O2' G B 9 -7.029 1.593 27.250 1.00 15.11 O
ATOM 13 C1' G B 9 -6.216 1.482 24.982 1.00 11.18 C
ATOM 14 N9 G B 9 -5.003 2.104 24.413 1.00 7.61 N
ATOM 15 C8 G B 9 -4.855 2.560 23.128 1.00 7.91 C
ATOM 16 N7 G B 9 -3.688 3.065 22.867 1.00 10.05 N
ATOM 17 C5 G B 9 -3.012 2.945 24.071 1.00 7.22 C
ATOM 18 C6 G B 9 -1.719 3.348 24.369 1.00 9.83 C
ATOM 19 O6 G B 9 -0.924 3.882 23.611 1.00 13.90 O
ATOM 20 N1 G B 9 -1.381 3.080 25.674 1.00 13.13 N
ATOM 21 C2 G B 9 -2.215 2.480 26.598 1.00 13.04 C
ATOM 22 N2 G B 9 -1.725 2.286 27.840 1.00 13.46 N
ATOM 23 N3 G B 9 -3.463 2.086 26.296 1.00 7.60 N
ATOM 24 C4 G B 9 -3.792 2.353 25.024 1.00 4.96 C
ATOM 25 P A B 10 -9.232 5.163 26.540 1.00 26.30 P
ATOM 26 OP1 A B 10 -10.334 5.296 27.503 1.00 27.59 O
ATOM 27 OP2 A B 10 -9.448 5.689 25.162 1.00 21.15 O
ATOM 28 O5' A B 10 -7.934 5.874 27.208 1.00 20.47 O
TER
ATOM 2 P A A 10 -9.232 5.163 26.540 1.00 26.30 P
ATOM 3 OP1 A A 10 -10.334 5.296 27.503 1.00 27.59 O
ATOM 4 OP2 A A 10 -9.448 5.689 25.162 1.00 21.15 O
ATOM 5 O5' A A 10 -7.934 5.874 27.208 1.00 20.47 O
ATOM 6 C5' A A 10 -7.769 5.700 28.631 1.00 22.03 C
ATOM 7 C4' A A 10 -6.303 5.780 29.156 1.00 22.47 C
ATOM 8 O4' A A 10 -5.426 5.235 28.153 1.00 22.85 O
ATOM 9 C3' A A 10 -5.581 7.097 29.412 1.00 19.91 C
ATOM 10 O3' A A 10 -5.973 7.887 30.540 1.00 19.50 O
ATOM 11 C2' A A 10 -4.125 6.657 29.544 1.00 18.08 C
ATOM 12 O2' A A 10 -3.758 6.114 30.830 1.00 20.88 O
ATOM 13 C1' A A 10 -4.080 5.582 28.506 1.00 14.08 C
ATOM 14 N9 A A 10 -3.406 5.894 27.281 1.00 8.64 N
ATOM 15 C8 A A 10 -3.926 5.958 26.002 1.00 7.83 C
ATOM 16 N7 A A 10 -3.022 6.225 25.090 1.00 10.12 N
ATOM 17 C5 A A 10 -1.836 6.342 25.839 1.00 7.72 C
ATOM 18 C6 A A 10 -0.523 6.627 25.472 1.00 5.72 C
ATOM 19 N6 A A 10 -0.163 6.856 24.216 1.00 9.65 N
ATOM 20 N1 A A 10 0.392 6.667 26.432 1.00 6.64 N
ATOM 21 C2 A A 10 0.014 6.443 27.695 1.00 8.06 C
ATOM 22 N3 A A 10 -1.198 6.169 28.172 1.00 7.37 N
ATOM 23 C4 A A 10 -2.078 6.130 27.166 1.00 6.11 C
ATOM 24 P U A 11 -5.939 9.512 30.404 1.00 15.44 P
ATOM 25 OP1 U A 11 -6.565 10.030 31.640 1.00 15.44 O
ATOM 26 OP2 U A 11 -6.481 9.877 29.094 1.00 6.98 O
ATOM 27 O5' U A 11 -4.346 9.871 30.364 1.00 10.18 O
TER
ATOM 1 O3' U B 8 -8.416 0.844 21.230 1.00 20.45 O
ATOM 2 P G B 9 -8.794 2.441 21.242 1.00 14.23 P
ATOM 3 OP1 G B 9 -9.658 2.644 20.058 1.00 14.73 O
ATOM 4 OP2 G B 9 -7.582 3.283 21.368 1.00 16.67 O
ATOM 5 O5' G B 9 -9.644 2.663 22.554 1.00 12.29 O
ATOM 6 C5' G B 9 -9.676 1.833 23.706 1.00 14.98 C
ATOM 7 C4' G B 9 -8.465 1.778 24.650 1.00 15.11 C
ATOM 8 O4' G B 9 -7.266 1.424 23.966 1.00 13.00 O
ATOM 9 C3' G B 9 -8.023 2.972 25.457 1.00 17.87 C
ATOM 10 O3' G B 9 -8.905 3.544 26.461 1.00 25.04 O
ATOM 11 C2' G B 9 -6.768 2.370 26.091 1.00 15.03 C
ATOM 12 O2' G B 9 -7.029 1.593 27.250 1.00 15.11 O
ATOM 13 C1' G B 9 -6.216 1.482 24.982 1.00 11.18 C
ATOM 14 N9 G B 9 -5.003 2.104 24.413 1.00 7.61 N
ATOM 15 C8 G B 9 -4.855 2.560 23.128 1.00 7.91 C
ATOM 16 N7 G B 9 -3.688 3.065 22.867 1.00 10.05 N
ATOM 17 C5 G B 9 -3.012 2.945 24.071 1.00 7.22 C
ATOM 18 C6 G B 9 -1.719 3.348 24.369 1.00 9.83 C
ATOM 19 O6 G B 9 -0.924 3.882 23.611 1.00 13.90 O
ATOM 20 N1 G B 9 -1.381 3.080 25.674 1.00 13.13 N
ATOM 21 C2 G B 9 -2.215 2.480 26.598 1.00 13.04 C
ATOM 22 N2 G B 9 -1.725 2.286 27.840 1.00 13.46 N
ATOM 23 N3 G B 9 -3.463 2.086 26.296 1.00 7.60 N
ATOM 24 C4 G B 9 -3.792 2.353 25.024 1.00 4.96 C
ATOM 25 P A B 10 -9.232 5.163 26.540 1.00 26.30 P
ATOM 26 OP1 A B 10 -10.334 5.296 27.503 1.00 27.59 O
ATOM 27 OP2 A B 10 -9.448 5.689 25.162 1.00 21.15 O
ATOM 28 O5' A B 10 -7.934 5.874 27.208 1.00 20.47 O
TER
Atoms:
OP1: (-10.334,5.296,27.503)
OP2: (-9.448,5.689,25.162)
C3': (-5.581,7.097,29.412)
C1': (-4.080,5.582,28.506)
C5': (-7.769,5.700,28.631)
O4': (-5.426,5.235,28.153)
C8: (-3.926,5.958,26.002)
O2': (-3.758,6.114,30.830)
C6: (-0.523,6.627,25.472)
C5: (-1.836,6.342,25.839)
C4: (-2.078,6.130,27.166)
P: (-9.232,5.163,26.540)
C4': (-6.303,5.780,29.156)
C2': (-4.125,6.657,29.544)
C2: (0.014,6.443,27.695)
N1: (0.392,6.667,26.432)
N3: (-1.198,6.169,28.172)
N6: (-0.163,6.856,24.216)
N7: (-3.022,6.225,25.090)
N9: (-3.406,5.894,27.281)
O5': (-7.934,5.874,27.208)
O3': (-5.973,7.887,30.540)
OP2: (-9.448,5.689,25.162)
C3': (-5.581,7.097,29.412)
C1': (-4.080,5.582,28.506)
C5': (-7.769,5.700,28.631)
O4': (-5.426,5.235,28.153)
C8: (-3.926,5.958,26.002)
O2': (-3.758,6.114,30.830)
C6: (-0.523,6.627,25.472)
C5: (-1.836,6.342,25.839)
C4: (-2.078,6.130,27.166)
P: (-9.232,5.163,26.540)
C4': (-6.303,5.780,29.156)
C2': (-4.125,6.657,29.544)
C2: (0.014,6.443,27.695)
N1: (0.392,6.667,26.432)
N3: (-1.198,6.169,28.172)
N6: (-0.163,6.856,24.216)
N7: (-3.022,6.225,25.090)
N9: (-3.406,5.894,27.281)
O5': (-7.934,5.874,27.208)
O3': (-5.973,7.887,30.540)
OP1: (-9.658,2.644,20.058)
OP2: (-7.582,3.283,21.368)
C3': (-8.023,2.972,25.457)
C1': (-6.216,1.482,24.982)
C5': (-9.676,1.833,23.706)
O6: (-0.924,3.882,23.611)
O4': (-7.266,1.424,23.966)
C8: (-4.855,2.560,23.128)
C2: (-2.215,2.480,26.598)
C6: (-1.719,3.348,24.369)
C5: (-3.012,2.945,24.071)
C4: (-3.792,2.353,25.024)
P: (-8.794,2.441,21.242)
C4': (-8.465,1.778,24.650)
C2': (-6.768,2.370,26.091)
O2': (-7.029,1.593,27.250)
N1: (-1.381,3.080,25.674)
N2: (-1.725,2.286,27.840)
N3: (-3.463,2.086,26.296)
N7: (-3.688,3.065,22.867)
N9: (-5.003,2.104,24.413)
O5': (-9.644,2.663,22.554)
O3': (-8.905,3.544,26.461)
OP2: (-7.582,3.283,21.368)
C3': (-8.023,2.972,25.457)
C1': (-6.216,1.482,24.982)
C5': (-9.676,1.833,23.706)
O6: (-0.924,3.882,23.611)
O4': (-7.266,1.424,23.966)
C8: (-4.855,2.560,23.128)
C2: (-2.215,2.480,26.598)
C6: (-1.719,3.348,24.369)
C5: (-3.012,2.945,24.071)
C4: (-3.792,2.353,25.024)
P: (-8.794,2.441,21.242)
C4': (-8.465,1.778,24.650)
C2': (-6.768,2.370,26.091)
O2': (-7.029,1.593,27.250)
N1: (-1.381,3.080,25.674)
N2: (-1.725,2.286,27.840)
N3: (-3.463,2.086,26.296)
N7: (-3.688,3.065,22.867)
N9: (-5.003,2.104,24.413)
O5': (-9.644,2.663,22.554)
O3': (-8.905,3.544,26.461)
Image (generated by PyMOL):