Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X29:X28
Extra
PDB:
ATOM 1 O3' G A 28 -9.155 -0.163 14.582 1.00 39.08 O
ATOM 2 P A A 29 -9.952 -1.559 14.567 1.00 38.99 P
ATOM 3 OP1 A A 29 -10.679 -1.565 13.271 1.00 41.33 O
ATOM 4 OP2 A A 29 -10.747 -1.720 15.814 1.00 35.99 O
ATOM 5 O5' A A 29 -8.752 -2.587 14.503 1.00 35.37 O
ATOM 6 C5' A A 29 -7.931 -2.715 13.357 1.00 33.35 C
ATOM 7 C4' A A 29 -6.749 -3.597 13.654 1.00 37.39 C
ATOM 8 O4' A A 29 -5.924 -2.980 14.673 1.00 36.64 O
ATOM 9 C3' A A 29 -7.072 -4.959 14.245 1.00 37.39 C
ATOM 10 O3' A A 29 -7.482 -5.918 13.288 1.00 39.07 O
ATOM 11 C2' A A 29 -5.763 -5.323 14.924 1.00 36.64 C
ATOM 12 O2' A A 29 -4.794 -5.676 13.948 1.00 41.52 O
ATOM 13 C1' A A 29 -5.369 -3.976 15.511 1.00 34.15 C
ATOM 14 N9 A A 29 -5.900 -3.796 16.877 1.00 30.75 N
ATOM 15 C8 A A 29 -7.087 -3.215 17.262 1.00 32.26 C
ATOM 16 N7 A A 29 -7.285 -3.201 18.562 1.00 31.24 N
ATOM 17 C5 A A 29 -6.142 -3.820 19.063 1.00 28.50 C
ATOM 18 C6 A A 29 -5.729 -4.110 20.373 1.00 26.38 C
ATOM 19 N6 A A 29 -6.441 -3.808 21.458 1.00 28.32 N
ATOM 20 N1 A A 29 -4.551 -4.734 20.529 1.00 25.13 N
ATOM 21 C2 A A 29 -3.830 -5.041 19.443 1.00 29.72 C
ATOM 22 N3 A A 29 -4.104 -4.814 18.159 1.00 26.94 N
ATOM 23 C4 A A 29 -5.287 -4.189 18.042 1.00 29.27 C
ATOM 24 P G A 30 -8.711 -6.907 13.586 1.00 40.41 P
ATOM 25 OP1 G A 30 -8.784 -7.732 12.353 1.00 47.70 O
ATOM 26 OP2 G A 30 -9.880 -6.074 13.959 1.00 38.57 O
ATOM 27 O5' G A 30 -8.306 -7.759 14.880 1.00 44.77 O
TER
ATOM 1 O3' G B 27 -11.441 4.616 17.819 1.00 43.23 O
ATOM 2 P G B 28 -11.787 3.049 17.889 1.00 43.31 P
ATOM 3 OP1 G B 28 -13.005 3.010 17.040 1.00 45.41 O
ATOM 4 OP2 G B 28 -11.838 2.662 19.332 1.00 36.58 O
ATOM 5 O5' G B 28 -10.562 2.271 17.236 1.00 38.16 O
ATOM 6 C5' G B 28 -10.050 2.599 15.956 1.00 36.86 C
ATOM 7 C4' G B 28 -8.713 1.943 15.735 1.00 38.23 C
ATOM 8 O4' G B 28 -7.783 2.328 16.784 1.00 38.14 O
ATOM 9 C3' G B 28 -8.685 0.425 15.780 1.00 33.41 C
ATOM 10 O3' G B 28 -9.155 -0.163 14.582 1.00 39.08 O
ATOM 11 C2' G B 28 -7.211 0.150 16.032 1.00 35.86 C
ATOM 12 O2' G B 28 -6.476 0.348 14.837 1.00 39.92 O
ATOM 13 C1' G B 28 -6.851 1.286 16.986 1.00 31.65 C
ATOM 14 N9 G B 28 -6.881 0.893 18.409 1.00 30.13 N
ATOM 15 C8 G B 28 -7.841 1.216 19.343 1.00 31.90 C
ATOM 16 N7 G B 28 -7.587 0.739 20.536 1.00 29.65 N
ATOM 17 C5 G B 28 -6.375 0.075 20.375 1.00 29.42 C
ATOM 18 C6 G B 28 -5.589 -0.641 21.315 1.00 28.78 C
ATOM 19 O6 G B 28 -5.805 -0.821 22.521 1.00 24.69 O
ATOM 20 N1 G B 28 -4.441 -1.157 20.731 1.00 26.34 N
ATOM 21 C2 G B 28 -4.078 -1.016 19.418 1.00 28.82 C
ATOM 22 N2 G B 28 -2.929 -1.597 19.052 1.00 23.78 N
ATOM 23 N3 G B 28 -4.802 -0.357 18.531 1.00 30.67 N
ATOM 24 C4 G B 28 -5.923 0.167 19.073 1.00 28.97 C
ATOM 25 P A B 29 -9.952 -1.559 14.567 1.00 38.99 P
ATOM 26 OP1 A B 29 -10.679 -1.565 13.271 1.00 41.33 O
ATOM 27 OP2 A B 29 -10.747 -1.720 15.814 1.00 35.99 O
ATOM 28 O5' A B 29 -8.752 -2.587 14.503 1.00 35.37 O
TER
ATOM 2 P A A 29 -9.952 -1.559 14.567 1.00 38.99 P
ATOM 3 OP1 A A 29 -10.679 -1.565 13.271 1.00 41.33 O
ATOM 4 OP2 A A 29 -10.747 -1.720 15.814 1.00 35.99 O
ATOM 5 O5' A A 29 -8.752 -2.587 14.503 1.00 35.37 O
ATOM 6 C5' A A 29 -7.931 -2.715 13.357 1.00 33.35 C
ATOM 7 C4' A A 29 -6.749 -3.597 13.654 1.00 37.39 C
ATOM 8 O4' A A 29 -5.924 -2.980 14.673 1.00 36.64 O
ATOM 9 C3' A A 29 -7.072 -4.959 14.245 1.00 37.39 C
ATOM 10 O3' A A 29 -7.482 -5.918 13.288 1.00 39.07 O
ATOM 11 C2' A A 29 -5.763 -5.323 14.924 1.00 36.64 C
ATOM 12 O2' A A 29 -4.794 -5.676 13.948 1.00 41.52 O
ATOM 13 C1' A A 29 -5.369 -3.976 15.511 1.00 34.15 C
ATOM 14 N9 A A 29 -5.900 -3.796 16.877 1.00 30.75 N
ATOM 15 C8 A A 29 -7.087 -3.215 17.262 1.00 32.26 C
ATOM 16 N7 A A 29 -7.285 -3.201 18.562 1.00 31.24 N
ATOM 17 C5 A A 29 -6.142 -3.820 19.063 1.00 28.50 C
ATOM 18 C6 A A 29 -5.729 -4.110 20.373 1.00 26.38 C
ATOM 19 N6 A A 29 -6.441 -3.808 21.458 1.00 28.32 N
ATOM 20 N1 A A 29 -4.551 -4.734 20.529 1.00 25.13 N
ATOM 21 C2 A A 29 -3.830 -5.041 19.443 1.00 29.72 C
ATOM 22 N3 A A 29 -4.104 -4.814 18.159 1.00 26.94 N
ATOM 23 C4 A A 29 -5.287 -4.189 18.042 1.00 29.27 C
ATOM 24 P G A 30 -8.711 -6.907 13.586 1.00 40.41 P
ATOM 25 OP1 G A 30 -8.784 -7.732 12.353 1.00 47.70 O
ATOM 26 OP2 G A 30 -9.880 -6.074 13.959 1.00 38.57 O
ATOM 27 O5' G A 30 -8.306 -7.759 14.880 1.00 44.77 O
TER
ATOM 1 O3' G B 27 -11.441 4.616 17.819 1.00 43.23 O
ATOM 2 P G B 28 -11.787 3.049 17.889 1.00 43.31 P
ATOM 3 OP1 G B 28 -13.005 3.010 17.040 1.00 45.41 O
ATOM 4 OP2 G B 28 -11.838 2.662 19.332 1.00 36.58 O
ATOM 5 O5' G B 28 -10.562 2.271 17.236 1.00 38.16 O
ATOM 6 C5' G B 28 -10.050 2.599 15.956 1.00 36.86 C
ATOM 7 C4' G B 28 -8.713 1.943 15.735 1.00 38.23 C
ATOM 8 O4' G B 28 -7.783 2.328 16.784 1.00 38.14 O
ATOM 9 C3' G B 28 -8.685 0.425 15.780 1.00 33.41 C
ATOM 10 O3' G B 28 -9.155 -0.163 14.582 1.00 39.08 O
ATOM 11 C2' G B 28 -7.211 0.150 16.032 1.00 35.86 C
ATOM 12 O2' G B 28 -6.476 0.348 14.837 1.00 39.92 O
ATOM 13 C1' G B 28 -6.851 1.286 16.986 1.00 31.65 C
ATOM 14 N9 G B 28 -6.881 0.893 18.409 1.00 30.13 N
ATOM 15 C8 G B 28 -7.841 1.216 19.343 1.00 31.90 C
ATOM 16 N7 G B 28 -7.587 0.739 20.536 1.00 29.65 N
ATOM 17 C5 G B 28 -6.375 0.075 20.375 1.00 29.42 C
ATOM 18 C6 G B 28 -5.589 -0.641 21.315 1.00 28.78 C
ATOM 19 O6 G B 28 -5.805 -0.821 22.521 1.00 24.69 O
ATOM 20 N1 G B 28 -4.441 -1.157 20.731 1.00 26.34 N
ATOM 21 C2 G B 28 -4.078 -1.016 19.418 1.00 28.82 C
ATOM 22 N2 G B 28 -2.929 -1.597 19.052 1.00 23.78 N
ATOM 23 N3 G B 28 -4.802 -0.357 18.531 1.00 30.67 N
ATOM 24 C4 G B 28 -5.923 0.167 19.073 1.00 28.97 C
ATOM 25 P A B 29 -9.952 -1.559 14.567 1.00 38.99 P
ATOM 26 OP1 A B 29 -10.679 -1.565 13.271 1.00 41.33 O
ATOM 27 OP2 A B 29 -10.747 -1.720 15.814 1.00 35.99 O
ATOM 28 O5' A B 29 -8.752 -2.587 14.503 1.00 35.37 O
TER
Atoms:
OP1: (-10.679,-1.565,13.271)
OP2: (-10.747,-1.720,15.814)
C3': (-7.072,-4.959,14.245)
C1': (-5.369,-3.976,15.511)
C5': (-7.931,-2.715,13.357)
O4': (-5.924,-2.980,14.673)
C8: (-7.087,-3.215,17.262)
O2': (-4.794,-5.676,13.948)
C6: (-5.729,-4.110,20.373)
C5: (-6.142,-3.820,19.063)
C4: (-5.287,-4.189,18.042)
P: (-9.952,-1.559,14.567)
C4': (-6.749,-3.597,13.654)
C2': (-5.763,-5.323,14.924)
C2: (-3.830,-5.041,19.443)
N1: (-4.551,-4.734,20.529)
N3: (-4.104,-4.814,18.159)
N6: (-6.441,-3.808,21.458)
N7: (-7.285,-3.201,18.562)
N9: (-5.900,-3.796,16.877)
O5': (-8.752,-2.587,14.503)
O3': (-7.482,-5.918,13.288)
OP2: (-10.747,-1.720,15.814)
C3': (-7.072,-4.959,14.245)
C1': (-5.369,-3.976,15.511)
C5': (-7.931,-2.715,13.357)
O4': (-5.924,-2.980,14.673)
C8: (-7.087,-3.215,17.262)
O2': (-4.794,-5.676,13.948)
C6: (-5.729,-4.110,20.373)
C5: (-6.142,-3.820,19.063)
C4: (-5.287,-4.189,18.042)
P: (-9.952,-1.559,14.567)
C4': (-6.749,-3.597,13.654)
C2': (-5.763,-5.323,14.924)
C2: (-3.830,-5.041,19.443)
N1: (-4.551,-4.734,20.529)
N3: (-4.104,-4.814,18.159)
N6: (-6.441,-3.808,21.458)
N7: (-7.285,-3.201,18.562)
N9: (-5.900,-3.796,16.877)
O5': (-8.752,-2.587,14.503)
O3': (-7.482,-5.918,13.288)
OP1: (-13.005,3.010,17.040)
OP2: (-11.838,2.662,19.332)
C3': (-8.685,0.425,15.780)
C1': (-6.851,1.286,16.986)
C5': (-10.050,2.599,15.956)
O6: (-5.805,-0.821,22.521)
O4': (-7.783,2.328,16.784)
C8: (-7.841,1.216,19.343)
C2: (-4.078,-1.016,19.418)
C6: (-5.589,-0.641,21.315)
C5: (-6.375,0.075,20.375)
C4: (-5.923,0.167,19.073)
P: (-11.787,3.049,17.889)
C4': (-8.713,1.943,15.735)
C2': (-7.211,0.150,16.032)
O2': (-6.476,0.348,14.837)
N1: (-4.441,-1.157,20.731)
N2: (-2.929,-1.597,19.052)
N3: (-4.802,-0.357,18.531)
N7: (-7.587,0.739,20.536)
N9: (-6.881,0.893,18.409)
O5': (-10.562,2.271,17.236)
O3': (-9.155,-0.163,14.582)
OP2: (-11.838,2.662,19.332)
C3': (-8.685,0.425,15.780)
C1': (-6.851,1.286,16.986)
C5': (-10.050,2.599,15.956)
O6: (-5.805,-0.821,22.521)
O4': (-7.783,2.328,16.784)
C8: (-7.841,1.216,19.343)
C2: (-4.078,-1.016,19.418)
C6: (-5.589,-0.641,21.315)
C5: (-6.375,0.075,20.375)
C4: (-5.923,0.167,19.073)
P: (-11.787,3.049,17.889)
C4': (-8.713,1.943,15.735)
C2': (-7.211,0.150,16.032)
O2': (-6.476,0.348,14.837)
N1: (-4.441,-1.157,20.731)
N2: (-2.929,-1.597,19.052)
N3: (-4.802,-0.357,18.531)
N7: (-7.587,0.739,20.536)
N9: (-6.881,0.893,18.409)
O5': (-10.562,2.271,17.236)
O3': (-9.155,-0.163,14.582)
Image (generated by PyMOL):