ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:920:919

Extra

PDB:
ATOM 1 O3' G A 19 58.083 11.016 117.693 1.00 85.36 O
ATOM 2 P G A 20 59.056 10.107 116.788 1.00 86.64 P
ATOM 3 OP1 G A 20 58.719 8.680 117.018 1.00 88.68 O
ATOM 4 OP2 G A 20 60.451 10.572 117.003 1.00 87.18 O
ATOM 5 O5' G A 20 58.636 10.467 115.298 1.00 85.45 O
ATOM 6 C5' G A 20 57.319 10.170 114.812 1.00 84.88 C
ATOM 7 C4' G A 20 57.259 10.395 113.326 1.00 85.39 C
ATOM 8 O4' G A 20 57.400 11.809 113.031 1.00 85.39 O
ATOM 9 C3' G A 20 58.390 9.744 112.556 1.00 86.47 C
ATOM 10 O3' G A 20 58.120 8.369 112.332 1.00 87.55 O
ATOM 11 C2' G A 20 58.434 10.571 111.276 1.00 86.44 C
ATOM 12 O2' G A 20 57.450 10.188 110.336 1.00 85.29 O
ATOM 13 C1' G A 20 58.117 11.972 111.815 1.00 86.74 C
ATOM 14 N9 G A 20 59.299 12.797 112.070 1.00 87.93 N
ATOM 15 C8 G A 20 60.061 12.840 113.216 1.00 88.07 C
ATOM 16 N7 G A 20 61.065 13.672 113.135 1.00 87.81 N
ATOM 17 C5 G A 20 60.960 14.216 111.861 1.00 88.69 C
ATOM 18 C6 G A 20 61.770 15.179 111.199 1.00 88.35 C
ATOM 19 O6 G A 20 62.770 15.767 111.622 1.00 88.36 O
ATOM 20 N1 G A 20 61.310 15.436 109.913 1.00 88.32 N
ATOM 21 C2 G A 20 60.214 14.848 109.333 1.00 88.64 C
ATOM 22 N2 G A 20 59.940 15.215 108.074 1.00 88.73 N
ATOM 23 N3 G A 20 59.446 13.960 109.940 1.00 88.98 N
ATOM 24 C4 G A 20 59.875 13.689 111.191 1.00 88.66 C
ATOM 25 P G A 21 59.331 7.321 112.219 1.00 88.34 P
ATOM 26 OP1 G A 21 59.220 6.374 113.352 1.00 88.61 O
ATOM 27 OP2 G A 21 60.595 8.072 112.020 1.00 88.72 O
ATOM 28 O5' G A 21 58.987 6.537 110.876 1.00 90.70 O
TER

ATOM 1 O3' G B 18 59.670 15.034 122.100 1.00 79.76 O
ATOM 2 P G B 19 60.491 13.979 121.194 1.00 81.43 P
ATOM 3 OP1 G B 19 60.586 12.706 121.958 1.00 80.98 O
ATOM 4 OP2 G B 19 61.736 14.639 120.723 1.00 80.53 O
ATOM 5 O5' G B 19 59.545 13.734 119.935 1.00 80.18 O
ATOM 6 C5' G B 19 58.245 13.154 120.107 1.00 81.37 C
ATOM 7 C4' G B 19 57.495 13.115 118.797 1.00 83.31 C
ATOM 8 O4' G B 19 57.249 14.464 118.314 1.00 84.21 O
ATOM 9 C3' G B 19 58.172 12.434 117.619 1.00 83.69 C
ATOM 10 O3' G B 19 58.083 11.016 117.693 1.00 85.36 O
ATOM 11 C2' G B 19 57.380 13.004 116.447 1.00 83.86 C
ATOM 12 O2' G B 19 56.103 12.417 116.295 1.00 82.88 O
ATOM 13 C1' G B 19 57.195 14.456 116.891 1.00 83.95 C
ATOM 14 N9 G B 19 58.252 15.323 116.373 1.00 84.30 N
ATOM 15 C8 G B 19 59.302 15.868 117.074 1.00 84.17 C
ATOM 16 N7 G B 19 60.092 16.594 116.332 1.00 84.36 N
ATOM 17 C5 G B 19 59.531 16.529 115.064 1.00 83.92 C
ATOM 18 C6 G B 19 59.947 17.122 113.846 1.00 83.27 C
ATOM 19 O6 G B 19 60.922 17.853 113.639 1.00 82.51 O
ATOM 20 N1 G B 19 59.092 16.793 112.800 1.00 83.10 N
ATOM 21 C2 G B 19 57.979 16.001 112.910 1.00 82.75 C
ATOM 22 N2 G B 19 57.284 15.804 111.785 1.00 83.05 N
ATOM 23 N3 G B 19 57.577 15.445 114.039 1.00 83.45 N
ATOM 24 C4 G B 19 58.395 15.749 115.070 1.00 84.01 C
ATOM 25 P G B 20 59.056 10.107 116.788 1.00 86.64 P
ATOM 26 OP1 G B 20 58.719 8.680 117.018 1.00 88.68 O
ATOM 27 OP2 G B 20 60.451 10.572 117.003 1.00 87.18 O
ATOM 28 O5' G B 20 58.636 10.467 115.298 1.00 85.45 O
TER

Atoms:
OP1: (58.719,8.680,117.018)
OP2: (60.451,10.572,117.003)
C3': (58.390,9.744,112.556)
C1': (58.117,11.972,111.815)
C5': (57.319,10.170,114.812)
O6: (62.770,15.767,111.622)
O4': (57.400,11.809,113.031)
C8: (60.061,12.840,113.216)
C2: (60.214,14.848,109.333)
C6: (61.770,15.179,111.199)
C5: (60.960,14.216,111.861)
C4: (59.875,13.689,111.191)
P: (59.056,10.107,116.788)
C4': (57.259,10.395,113.326)
C2': (58.434,10.571,111.276)
O2': (57.450,10.188,110.336)
N1: (61.310,15.436,109.913)
N2: (59.940,15.215,108.074)
N3: (59.446,13.960,109.940)
N7: (61.065,13.672,113.135)
N9: (59.299,12.797,112.070)
O5': (58.636,10.467,115.298)
O3': (58.120,8.369,112.332)
OP1: (60.586,12.706,121.958)
OP2: (61.736,14.639,120.723)
C3': (58.172,12.434,117.619)
C1': (57.195,14.456,116.891)
C5': (58.245,13.154,120.107)
O6: (60.922,17.853,113.639)
O4': (57.249,14.464,118.314)
C8: (59.302,15.868,117.074)
C2: (57.979,16.001,112.910)
C6: (59.947,17.122,113.846)
C5: (59.531,16.529,115.064)
C4: (58.395,15.749,115.070)
P: (60.491,13.979,121.194)
C4': (57.495,13.115,118.797)
C2': (57.380,13.004,116.447)
O2': (56.103,12.417,116.295)
N1: (59.092,16.793,112.800)
N2: (57.284,15.804,111.785)
N3: (57.577,15.445,114.039)
N7: (60.092,16.594,116.332)
N9: (58.252,15.323,116.373)
O5': (59.545,13.734,119.935)
O3': (58.083,11.016,117.693)
Image (generated by PyMOL):
PyMOL image
show in jmol