Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12935:12934
Extra
PDB:
ATOM 1 O3' G A2934 53.092 37.311 1.460 1.00 49.27 O
ATOM 2 P A A2935 52.399 35.905 1.869 1.00 51.02 P
ATOM 3 OP1 A A2935 51.280 36.252 2.767 1.00 50.79 O
ATOM 4 OP2 A A2935 53.426 34.980 2.365 1.00 50.58 O
ATOM 5 O5' A A2935 51.812 35.382 0.510 1.00 51.42 O
ATOM 6 C5' A A2935 50.673 36.002 -0.049 1.00 51.83 C
ATOM 7 C4' A A2935 50.385 35.440 -1.388 1.00 52.22 C
ATOM 8 O4' A A2935 51.493 35.707 -2.281 1.00 52.62 O
ATOM 9 C3' A A2935 50.253 33.946 -1.437 1.00 51.88 C
ATOM 10 O3' A A2935 48.994 33.515 -0.980 1.00 51.63 O
ATOM 11 C2' A A2935 50.490 33.676 -2.905 1.00 52.41 C
ATOM 12 O2' A A2935 49.353 34.084 -3.647 1.00 52.85 O
ATOM 13 C1' A A2935 51.634 34.644 -3.189 1.00 52.73 C
ATOM 14 N9 A A2935 52.917 33.998 -2.942 1.00 52.44 N
ATOM 15 C8 A A2935 53.613 33.946 -1.756 1.00 51.93 C
ATOM 16 N7 A A2935 54.702 33.203 -1.812 1.00 51.76 N
ATOM 17 C5 A A2935 54.705 32.727 -3.124 1.00 52.19 C
ATOM 18 C6 A A2935 55.573 31.876 -3.799 1.00 52.26 C
ATOM 19 N6 A A2935 56.684 31.352 -3.252 1.00 51.91 N
ATOM 20 N1 A A2935 55.264 31.576 -5.064 1.00 52.73 N
ATOM 21 C2 A A2935 54.187 32.109 -5.634 1.00 53.10 C
ATOM 22 N3 A A2935 53.276 32.919 -5.107 1.00 53.08 N
ATOM 23 C4 A A2935 53.603 33.191 -3.826 1.00 52.60 C
ATOM 24 P A A2936 48.685 31.961 -0.765 1.00 51.90 P
ATOM 25 OP1 A A2936 47.280 31.881 -0.360 1.00 51.77 O
ATOM 26 OP2 A A2936 49.724 31.414 0.145 1.00 51.38 O
ATOM 27 O5' A A2936 48.870 31.328 -2.212 1.00 52.33 O
TER
ATOM 1 O3' C B2933 59.159 38.520 2.161 1.00 48.16 O
ATOM 2 P G B2934 58.037 37.561 2.764 1.00 48.83 P
ATOM 3 OP1 G B2934 57.573 38.194 3.985 1.00 48.54 O
ATOM 4 OP2 G B2934 58.605 36.199 2.833 1.00 48.45 O
ATOM 5 O5' G B2934 56.890 37.631 1.688 1.00 49.24 O
ATOM 6 C5' G B2934 55.928 38.661 1.803 1.00 49.47 C
ATOM 7 C4' G B2934 54.938 38.670 0.683 1.00 49.91 C
ATOM 8 O4' G B2934 55.593 38.883 -0.586 1.00 50.45 O
ATOM 9 C3' G B2934 54.119 37.416 0.484 1.00 49.66 C
ATOM 10 O3' G B2934 53.092 37.311 1.460 1.00 49.27 O
ATOM 11 C2' G B2934 53.620 37.647 -0.937 1.00 50.28 C
ATOM 12 O2' G B2934 52.638 38.665 -0.960 1.00 50.58 O
ATOM 13 C1' G B2934 54.873 38.217 -1.590 1.00 50.68 C
ATOM 14 N9 G B2934 55.723 37.164 -2.120 1.00 50.60 N
ATOM 15 C8 G B2934 56.754 36.528 -1.475 1.00 50.18 C
ATOM 16 N7 G B2934 57.300 35.595 -2.220 1.00 50.24 N
ATOM 17 C5 G B2934 56.558 35.640 -3.418 1.00 50.74 C
ATOM 18 C6 G B2934 56.666 34.880 -4.619 1.00 51.05 C
ATOM 19 O6 G B2934 57.459 33.998 -4.931 1.00 50.96 O
ATOM 20 N1 G B2934 55.721 35.254 -5.544 1.00 51.53 N
ATOM 21 C2 G B2934 54.793 36.249 -5.318 1.00 51.70 C
ATOM 22 N2 G B2934 53.971 36.467 -6.347 1.00 52.21 N
ATOM 23 N3 G B2934 54.654 36.966 -4.208 1.00 51.42 N
ATOM 24 C4 G B2934 55.581 36.608 -3.334 1.00 50.95 C
ATOM 25 P A B2935 52.399 35.905 1.869 1.00 51.02 P
ATOM 26 OP1 A B2935 51.280 36.252 2.767 1.00 50.79 O
ATOM 27 OP2 A B2935 53.426 34.980 2.365 1.00 50.58 O
ATOM 28 O5' A B2935 51.812 35.382 0.510 1.00 51.42 O
TER
ATOM 2 P A A2935 52.399 35.905 1.869 1.00 51.02 P
ATOM 3 OP1 A A2935 51.280 36.252 2.767 1.00 50.79 O
ATOM 4 OP2 A A2935 53.426 34.980 2.365 1.00 50.58 O
ATOM 5 O5' A A2935 51.812 35.382 0.510 1.00 51.42 O
ATOM 6 C5' A A2935 50.673 36.002 -0.049 1.00 51.83 C
ATOM 7 C4' A A2935 50.385 35.440 -1.388 1.00 52.22 C
ATOM 8 O4' A A2935 51.493 35.707 -2.281 1.00 52.62 O
ATOM 9 C3' A A2935 50.253 33.946 -1.437 1.00 51.88 C
ATOM 10 O3' A A2935 48.994 33.515 -0.980 1.00 51.63 O
ATOM 11 C2' A A2935 50.490 33.676 -2.905 1.00 52.41 C
ATOM 12 O2' A A2935 49.353 34.084 -3.647 1.00 52.85 O
ATOM 13 C1' A A2935 51.634 34.644 -3.189 1.00 52.73 C
ATOM 14 N9 A A2935 52.917 33.998 -2.942 1.00 52.44 N
ATOM 15 C8 A A2935 53.613 33.946 -1.756 1.00 51.93 C
ATOM 16 N7 A A2935 54.702 33.203 -1.812 1.00 51.76 N
ATOM 17 C5 A A2935 54.705 32.727 -3.124 1.00 52.19 C
ATOM 18 C6 A A2935 55.573 31.876 -3.799 1.00 52.26 C
ATOM 19 N6 A A2935 56.684 31.352 -3.252 1.00 51.91 N
ATOM 20 N1 A A2935 55.264 31.576 -5.064 1.00 52.73 N
ATOM 21 C2 A A2935 54.187 32.109 -5.634 1.00 53.10 C
ATOM 22 N3 A A2935 53.276 32.919 -5.107 1.00 53.08 N
ATOM 23 C4 A A2935 53.603 33.191 -3.826 1.00 52.60 C
ATOM 24 P A A2936 48.685 31.961 -0.765 1.00 51.90 P
ATOM 25 OP1 A A2936 47.280 31.881 -0.360 1.00 51.77 O
ATOM 26 OP2 A A2936 49.724 31.414 0.145 1.00 51.38 O
ATOM 27 O5' A A2936 48.870 31.328 -2.212 1.00 52.33 O
TER
ATOM 1 O3' C B2933 59.159 38.520 2.161 1.00 48.16 O
ATOM 2 P G B2934 58.037 37.561 2.764 1.00 48.83 P
ATOM 3 OP1 G B2934 57.573 38.194 3.985 1.00 48.54 O
ATOM 4 OP2 G B2934 58.605 36.199 2.833 1.00 48.45 O
ATOM 5 O5' G B2934 56.890 37.631 1.688 1.00 49.24 O
ATOM 6 C5' G B2934 55.928 38.661 1.803 1.00 49.47 C
ATOM 7 C4' G B2934 54.938 38.670 0.683 1.00 49.91 C
ATOM 8 O4' G B2934 55.593 38.883 -0.586 1.00 50.45 O
ATOM 9 C3' G B2934 54.119 37.416 0.484 1.00 49.66 C
ATOM 10 O3' G B2934 53.092 37.311 1.460 1.00 49.27 O
ATOM 11 C2' G B2934 53.620 37.647 -0.937 1.00 50.28 C
ATOM 12 O2' G B2934 52.638 38.665 -0.960 1.00 50.58 O
ATOM 13 C1' G B2934 54.873 38.217 -1.590 1.00 50.68 C
ATOM 14 N9 G B2934 55.723 37.164 -2.120 1.00 50.60 N
ATOM 15 C8 G B2934 56.754 36.528 -1.475 1.00 50.18 C
ATOM 16 N7 G B2934 57.300 35.595 -2.220 1.00 50.24 N
ATOM 17 C5 G B2934 56.558 35.640 -3.418 1.00 50.74 C
ATOM 18 C6 G B2934 56.666 34.880 -4.619 1.00 51.05 C
ATOM 19 O6 G B2934 57.459 33.998 -4.931 1.00 50.96 O
ATOM 20 N1 G B2934 55.721 35.254 -5.544 1.00 51.53 N
ATOM 21 C2 G B2934 54.793 36.249 -5.318 1.00 51.70 C
ATOM 22 N2 G B2934 53.971 36.467 -6.347 1.00 52.21 N
ATOM 23 N3 G B2934 54.654 36.966 -4.208 1.00 51.42 N
ATOM 24 C4 G B2934 55.581 36.608 -3.334 1.00 50.95 C
ATOM 25 P A B2935 52.399 35.905 1.869 1.00 51.02 P
ATOM 26 OP1 A B2935 51.280 36.252 2.767 1.00 50.79 O
ATOM 27 OP2 A B2935 53.426 34.980 2.365 1.00 50.58 O
ATOM 28 O5' A B2935 51.812 35.382 0.510 1.00 51.42 O
TER
Atoms:
OP1: (51.280,36.252,2.767)
OP2: (53.426,34.980,2.365)
C3': (50.253,33.946,-1.437)
C1': (51.634,34.644,-3.189)
C5': (50.673,36.002,-0.049)
O4': (51.493,35.707,-2.281)
C8: (53.613,33.946,-1.756)
O2': (49.353,34.084,-3.647)
C6: (55.573,31.876,-3.799)
C5: (54.705,32.727,-3.124)
C4: (53.603,33.191,-3.826)
P: (52.399,35.905,1.869)
C4': (50.385,35.440,-1.388)
C2': (50.490,33.676,-2.905)
C2: (54.187,32.109,-5.634)
N1: (55.264,31.576,-5.064)
N3: (53.276,32.919,-5.107)
N6: (56.684,31.352,-3.252)
N7: (54.702,33.203,-1.812)
N9: (52.917,33.998,-2.942)
O5': (51.812,35.382,0.510)
O3': (48.994,33.515,-0.980)
OP2: (53.426,34.980,2.365)
C3': (50.253,33.946,-1.437)
C1': (51.634,34.644,-3.189)
C5': (50.673,36.002,-0.049)
O4': (51.493,35.707,-2.281)
C8: (53.613,33.946,-1.756)
O2': (49.353,34.084,-3.647)
C6: (55.573,31.876,-3.799)
C5: (54.705,32.727,-3.124)
C4: (53.603,33.191,-3.826)
P: (52.399,35.905,1.869)
C4': (50.385,35.440,-1.388)
C2': (50.490,33.676,-2.905)
C2: (54.187,32.109,-5.634)
N1: (55.264,31.576,-5.064)
N3: (53.276,32.919,-5.107)
N6: (56.684,31.352,-3.252)
N7: (54.702,33.203,-1.812)
N9: (52.917,33.998,-2.942)
O5': (51.812,35.382,0.510)
O3': (48.994,33.515,-0.980)
OP1: (57.573,38.194,3.985)
OP2: (58.605,36.199,2.833)
C3': (54.119,37.416,0.484)
C1': (54.873,38.217,-1.590)
C5': (55.928,38.661,1.803)
O6: (57.459,33.998,-4.931)
O4': (55.593,38.883,-0.586)
C8: (56.754,36.528,-1.475)
C2: (54.793,36.249,-5.318)
C6: (56.666,34.880,-4.619)
C5: (56.558,35.640,-3.418)
C4: (55.581,36.608,-3.334)
P: (58.037,37.561,2.764)
C4': (54.938,38.670,0.683)
C2': (53.620,37.647,-0.937)
O2': (52.638,38.665,-0.960)
N1: (55.721,35.254,-5.544)
N2: (53.971,36.467,-6.347)
N3: (54.654,36.966,-4.208)
N7: (57.300,35.595,-2.220)
N9: (55.723,37.164,-2.120)
O5': (56.890,37.631,1.688)
O3': (53.092,37.311,1.460)
OP2: (58.605,36.199,2.833)
C3': (54.119,37.416,0.484)
C1': (54.873,38.217,-1.590)
C5': (55.928,38.661,1.803)
O6: (57.459,33.998,-4.931)
O4': (55.593,38.883,-0.586)
C8: (56.754,36.528,-1.475)
C2: (54.793,36.249,-5.318)
C6: (56.666,34.880,-4.619)
C5: (56.558,35.640,-3.418)
C4: (55.581,36.608,-3.334)
P: (58.037,37.561,2.764)
C4': (54.938,38.670,0.683)
C2': (53.620,37.647,-0.937)
O2': (52.638,38.665,-0.960)
N1: (55.721,35.254,-5.544)
N2: (53.971,36.467,-6.347)
N3: (54.654,36.966,-4.208)
N7: (57.300,35.595,-2.220)
N9: (55.723,37.164,-2.120)
O5': (56.890,37.631,1.688)
O3': (53.092,37.311,1.460)
Image (generated by PyMOL):