Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX5:A86:A85
Extra
PDB:
ATOM 1 O3' G A 85 2.393 -13.487 12.570 1.00 41.53 O
ATOM 2 P A A 86 2.342 -12.252 11.562 1.00 44.83 P
ATOM 3 OP1 A A 86 1.276 -11.355 12.070 1.00 43.58 O
ATOM 4 OP2 A A 86 2.340 -12.766 10.172 1.00 42.31 O
ATOM 5 O5' A A 86 3.734 -11.515 11.782 1.00 52.72 O
ATOM 6 C5' A A 86 3.987 -10.903 13.021 1.00 49.37 C
ATOM 7 C4' A A 86 5.385 -10.349 12.967 1.00 46.54 C
ATOM 8 O4' A A 86 6.332 -11.436 12.903 1.00 42.83 O
ATOM 9 C3' A A 86 5.652 -9.571 11.702 1.00 46.51 C
ATOM 10 O3' A A 86 5.179 -8.269 11.925 1.00 46.11 O
ATOM 11 C2' A A 86 7.164 -9.593 11.728 1.00 45.96 C
ATOM 12 O2' A A 86 7.639 -8.728 12.738 1.00 50.80 O
ATOM 13 C1' A A 86 7.424 -11.039 12.109 1.00 42.57 C
ATOM 14 N9 A A 86 7.457 -11.940 10.969 1.00 46.89 N
ATOM 15 C8 A A 86 6.393 -12.606 10.419 1.00 46.47 C
ATOM 16 N7 A A 86 6.725 -13.355 9.391 1.00 46.62 N
ATOM 17 C5 A A 86 8.097 -13.172 9.266 1.00 44.38 C
ATOM 18 C6 A A 86 9.051 -13.690 8.367 1.00 38.74 C
ATOM 19 N6 A A 86 8.758 -14.545 7.380 1.00 30.66 N
ATOM 20 N1 A A 86 10.334 -13.299 8.528 1.00 43.65 N
ATOM 21 C2 A A 86 10.634 -12.445 9.516 1.00 45.24 C
ATOM 22 N3 A A 86 9.824 -11.891 10.418 1.00 44.08 N
ATOM 23 C4 A A 86 8.562 -12.304 10.237 1.00 45.01 C
ATOM 24 P U A 87 4.601 -7.367 10.746 1.00 43.51 P
ATOM 25 OP1 U A 87 4.135 -6.122 11.394 1.00 44.76 O
ATOM 26 OP2 U A 87 3.682 -8.162 9.894 1.00 42.78 O
ATOM 27 O5' U A 87 5.916 -7.007 9.919 1.00 37.08 O
TER
ATOM 1 O3' A B 84 1.123 -19.293 11.036 1.00 60.22 O
ATOM 2 P G B 85 1.158 -17.960 10.141 1.00 60.80 P
ATOM 3 OP1 G B 85 -0.212 -17.397 10.076 1.00 59.25 O
ATOM 4 OP2 G B 85 1.912 -18.289 8.908 1.00 54.86 O
ATOM 5 O5' G B 85 2.047 -16.948 11.009 1.00 52.82 O
ATOM 6 C5' G B 85 1.599 -16.521 12.288 1.00 51.87 C
ATOM 7 C4' G B 85 2.707 -15.798 13.034 1.00 49.46 C
ATOM 8 O4' G B 85 3.868 -16.657 13.179 1.00 45.83 O
ATOM 9 C3' G B 85 3.251 -14.573 12.327 1.00 45.95 C
ATOM 10 O3' G B 85 2.393 -13.487 12.570 1.00 41.53 O
ATOM 11 C2' G B 85 4.583 -14.412 13.049 1.00 48.36 C
ATOM 12 O2' G B 85 4.435 -13.865 14.347 1.00 53.12 O
ATOM 13 C1' G B 85 5.036 -15.865 13.145 1.00 44.17 C
ATOM 14 N9 G B 85 5.851 -16.310 12.024 1.00 44.71 N
ATOM 15 C8 G B 85 5.469 -17.097 10.962 1.00 47.11 C
ATOM 16 N7 G B 85 6.437 -17.334 10.114 1.00 49.57 N
ATOM 17 C5 G B 85 7.527 -16.656 10.645 1.00 49.32 C
ATOM 18 C6 G B 85 8.855 -16.541 10.166 1.00 51.71 C
ATOM 19 O6 G B 85 9.346 -17.034 9.137 1.00 50.78 O
ATOM 20 N1 G B 85 9.646 -15.763 11.020 1.00 54.02 N
ATOM 21 C2 G B 85 9.200 -15.166 12.184 1.00 51.55 C
ATOM 22 N2 G B 85 10.101 -14.447 12.872 1.00 48.27 N
ATOM 23 N3 G B 85 7.954 -15.263 12.642 1.00 49.87 N
ATOM 24 C4 G B 85 7.179 -16.020 11.822 1.00 48.59 C
ATOM 25 P A B 86 2.342 -12.252 11.562 1.00 44.83 P
ATOM 26 OP1 A B 86 1.276 -11.355 12.070 1.00 43.58 O
ATOM 27 OP2 A B 86 2.340 -12.766 10.172 1.00 42.31 O
ATOM 28 O5' A B 86 3.734 -11.515 11.782 1.00 52.72 O
TER
ATOM 2 P A A 86 2.342 -12.252 11.562 1.00 44.83 P
ATOM 3 OP1 A A 86 1.276 -11.355 12.070 1.00 43.58 O
ATOM 4 OP2 A A 86 2.340 -12.766 10.172 1.00 42.31 O
ATOM 5 O5' A A 86 3.734 -11.515 11.782 1.00 52.72 O
ATOM 6 C5' A A 86 3.987 -10.903 13.021 1.00 49.37 C
ATOM 7 C4' A A 86 5.385 -10.349 12.967 1.00 46.54 C
ATOM 8 O4' A A 86 6.332 -11.436 12.903 1.00 42.83 O
ATOM 9 C3' A A 86 5.652 -9.571 11.702 1.00 46.51 C
ATOM 10 O3' A A 86 5.179 -8.269 11.925 1.00 46.11 O
ATOM 11 C2' A A 86 7.164 -9.593 11.728 1.00 45.96 C
ATOM 12 O2' A A 86 7.639 -8.728 12.738 1.00 50.80 O
ATOM 13 C1' A A 86 7.424 -11.039 12.109 1.00 42.57 C
ATOM 14 N9 A A 86 7.457 -11.940 10.969 1.00 46.89 N
ATOM 15 C8 A A 86 6.393 -12.606 10.419 1.00 46.47 C
ATOM 16 N7 A A 86 6.725 -13.355 9.391 1.00 46.62 N
ATOM 17 C5 A A 86 8.097 -13.172 9.266 1.00 44.38 C
ATOM 18 C6 A A 86 9.051 -13.690 8.367 1.00 38.74 C
ATOM 19 N6 A A 86 8.758 -14.545 7.380 1.00 30.66 N
ATOM 20 N1 A A 86 10.334 -13.299 8.528 1.00 43.65 N
ATOM 21 C2 A A 86 10.634 -12.445 9.516 1.00 45.24 C
ATOM 22 N3 A A 86 9.824 -11.891 10.418 1.00 44.08 N
ATOM 23 C4 A A 86 8.562 -12.304 10.237 1.00 45.01 C
ATOM 24 P U A 87 4.601 -7.367 10.746 1.00 43.51 P
ATOM 25 OP1 U A 87 4.135 -6.122 11.394 1.00 44.76 O
ATOM 26 OP2 U A 87 3.682 -8.162 9.894 1.00 42.78 O
ATOM 27 O5' U A 87 5.916 -7.007 9.919 1.00 37.08 O
TER
ATOM 1 O3' A B 84 1.123 -19.293 11.036 1.00 60.22 O
ATOM 2 P G B 85 1.158 -17.960 10.141 1.00 60.80 P
ATOM 3 OP1 G B 85 -0.212 -17.397 10.076 1.00 59.25 O
ATOM 4 OP2 G B 85 1.912 -18.289 8.908 1.00 54.86 O
ATOM 5 O5' G B 85 2.047 -16.948 11.009 1.00 52.82 O
ATOM 6 C5' G B 85 1.599 -16.521 12.288 1.00 51.87 C
ATOM 7 C4' G B 85 2.707 -15.798 13.034 1.00 49.46 C
ATOM 8 O4' G B 85 3.868 -16.657 13.179 1.00 45.83 O
ATOM 9 C3' G B 85 3.251 -14.573 12.327 1.00 45.95 C
ATOM 10 O3' G B 85 2.393 -13.487 12.570 1.00 41.53 O
ATOM 11 C2' G B 85 4.583 -14.412 13.049 1.00 48.36 C
ATOM 12 O2' G B 85 4.435 -13.865 14.347 1.00 53.12 O
ATOM 13 C1' G B 85 5.036 -15.865 13.145 1.00 44.17 C
ATOM 14 N9 G B 85 5.851 -16.310 12.024 1.00 44.71 N
ATOM 15 C8 G B 85 5.469 -17.097 10.962 1.00 47.11 C
ATOM 16 N7 G B 85 6.437 -17.334 10.114 1.00 49.57 N
ATOM 17 C5 G B 85 7.527 -16.656 10.645 1.00 49.32 C
ATOM 18 C6 G B 85 8.855 -16.541 10.166 1.00 51.71 C
ATOM 19 O6 G B 85 9.346 -17.034 9.137 1.00 50.78 O
ATOM 20 N1 G B 85 9.646 -15.763 11.020 1.00 54.02 N
ATOM 21 C2 G B 85 9.200 -15.166 12.184 1.00 51.55 C
ATOM 22 N2 G B 85 10.101 -14.447 12.872 1.00 48.27 N
ATOM 23 N3 G B 85 7.954 -15.263 12.642 1.00 49.87 N
ATOM 24 C4 G B 85 7.179 -16.020 11.822 1.00 48.59 C
ATOM 25 P A B 86 2.342 -12.252 11.562 1.00 44.83 P
ATOM 26 OP1 A B 86 1.276 -11.355 12.070 1.00 43.58 O
ATOM 27 OP2 A B 86 2.340 -12.766 10.172 1.00 42.31 O
ATOM 28 O5' A B 86 3.734 -11.515 11.782 1.00 52.72 O
TER
Atoms:
OP1: (1.276,-11.355,12.070)
OP2: (2.340,-12.766,10.172)
C3': (5.652,-9.571,11.702)
C1': (7.424,-11.039,12.109)
C5': (3.987,-10.903,13.021)
O4': (6.332,-11.436,12.903)
C8: (6.393,-12.606,10.419)
O2': (7.639,-8.728,12.738)
C6: (9.051,-13.690,8.367)
C5: (8.097,-13.172,9.266)
C4: (8.562,-12.304,10.237)
P: (2.342,-12.252,11.562)
C4': (5.385,-10.349,12.967)
C2': (7.164,-9.593,11.728)
C2: (10.634,-12.445,9.516)
N1: (10.334,-13.299,8.528)
N3: (9.824,-11.891,10.418)
N6: (8.758,-14.545,7.380)
N7: (6.725,-13.355,9.391)
N9: (7.457,-11.940,10.969)
O5': (3.734,-11.515,11.782)
O3': (5.179,-8.269,11.925)
OP2: (2.340,-12.766,10.172)
C3': (5.652,-9.571,11.702)
C1': (7.424,-11.039,12.109)
C5': (3.987,-10.903,13.021)
O4': (6.332,-11.436,12.903)
C8: (6.393,-12.606,10.419)
O2': (7.639,-8.728,12.738)
C6: (9.051,-13.690,8.367)
C5: (8.097,-13.172,9.266)
C4: (8.562,-12.304,10.237)
P: (2.342,-12.252,11.562)
C4': (5.385,-10.349,12.967)
C2': (7.164,-9.593,11.728)
C2: (10.634,-12.445,9.516)
N1: (10.334,-13.299,8.528)
N3: (9.824,-11.891,10.418)
N6: (8.758,-14.545,7.380)
N7: (6.725,-13.355,9.391)
N9: (7.457,-11.940,10.969)
O5': (3.734,-11.515,11.782)
O3': (5.179,-8.269,11.925)
OP1: (-0.212,-17.397,10.076)
OP2: (1.912,-18.289,8.908)
C3': (3.251,-14.573,12.327)
C1': (5.036,-15.865,13.145)
C5': (1.599,-16.521,12.288)
O6: (9.346,-17.034,9.137)
O4': (3.868,-16.657,13.179)
C8: (5.469,-17.097,10.962)
C2: (9.200,-15.166,12.184)
C6: (8.855,-16.541,10.166)
C5: (7.527,-16.656,10.645)
C4: (7.179,-16.020,11.822)
P: (1.158,-17.960,10.141)
C4': (2.707,-15.798,13.034)
C2': (4.583,-14.412,13.049)
O2': (4.435,-13.865,14.347)
N1: (9.646,-15.763,11.020)
N2: (10.101,-14.447,12.872)
N3: (7.954,-15.263,12.642)
N7: (6.437,-17.334,10.114)
N9: (5.851,-16.310,12.024)
O5': (2.047,-16.948,11.009)
O3': (2.393,-13.487,12.570)
OP2: (1.912,-18.289,8.908)
C3': (3.251,-14.573,12.327)
C1': (5.036,-15.865,13.145)
C5': (1.599,-16.521,12.288)
O6: (9.346,-17.034,9.137)
O4': (3.868,-16.657,13.179)
C8: (5.469,-17.097,10.962)
C2: (9.200,-15.166,12.184)
C6: (8.855,-16.541,10.166)
C5: (7.527,-16.656,10.645)
C4: (7.179,-16.020,11.822)
P: (1.158,-17.960,10.141)
C4': (2.707,-15.798,13.034)
C2': (4.583,-14.412,13.049)
O2': (4.435,-13.865,14.347)
N1: (9.646,-15.763,11.020)
N2: (10.101,-14.447,12.872)
N3: (7.954,-15.263,12.642)
N7: (6.437,-17.334,10.114)
N9: (5.851,-16.310,12.024)
O5': (2.047,-16.948,11.009)
O3': (2.393,-13.487,12.570)
Image (generated by PyMOL):