Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A41:A40
Extra
PDB:
ATOM 1 O3' G A 40 1.026 -12.383 -20.416 1.00 53.62 O
ATOM 2 P G A 41 0.938 -10.998 -21.226 1.00 54.84 P
ATOM 3 OP1 G A 41 -0.394 -10.955 -21.878 1.00 64.61 O
ATOM 4 OP2 G A 41 2.148 -10.915 -22.076 1.00 57.44 O
ATOM 5 O5' G A 41 1.014 -9.905 -20.068 1.00 59.50 O
ATOM 6 C5' G A 41 0.040 -9.873 -19.036 1.00 57.39 C
ATOM 7 C4' G A 41 0.428 -8.925 -17.929 1.00 58.26 C
ATOM 8 O4' G A 41 1.598 -9.428 -17.230 1.00 58.26 O
ATOM 9 C3' G A 41 0.845 -7.528 -18.354 1.00 56.22 C
ATOM 10 O3' G A 41 -0.248 -6.689 -18.677 1.00 53.77 O
ATOM 11 C2' G A 41 1.647 -7.059 -17.153 1.00 62.80 C
ATOM 12 O2' G A 41 0.785 -6.721 -16.076 1.00 63.08 O
ATOM 13 C1' G A 41 2.389 -8.342 -16.787 1.00 62.91 C
ATOM 14 N9 G A 41 3.701 -8.412 -17.455 1.00 67.15 N
ATOM 15 C8 G A 41 4.021 -9.066 -18.622 1.00 64.56 C
ATOM 16 N7 G A 41 5.273 -8.918 -18.966 1.00 64.66 N
ATOM 17 C5 G A 41 5.804 -8.107 -17.968 1.00 65.18 C
ATOM 18 C6 G A 41 7.118 -7.599 -17.790 1.00 64.61 C
ATOM 19 O6 G A 41 8.109 -7.774 -18.507 1.00 62.80 O
ATOM 20 N1 G A 41 7.219 -6.818 -16.642 1.00 65.71 N
ATOM 21 C2 G A 41 6.192 -6.555 -15.773 1.00 66.43 C
ATOM 22 N2 G A 41 6.485 -5.779 -14.722 1.00 62.10 N
ATOM 23 N3 G A 41 4.965 -7.019 -15.925 1.00 65.40 N
ATOM 24 C4 G A 41 4.845 -7.783 -17.032 1.00 64.59 C
ATOM 25 P G A 42 -0.055 -5.493 -19.733 1.00 59.15 P
ATOM 26 OP1 G A 42 -1.401 -4.943 -20.021 1.00 67.75 O
ATOM 27 OP2 G A 42 0.751 -6.030 -20.857 1.00 57.97 O
ATOM 28 O5' G A 42 0.801 -4.429 -18.914 1.00 61.45 O
TER
ATOM 1 O3' C B 39 4.875 -16.502 -22.770 1.00 51.87 O
ATOM 2 P G B 40 4.305 -15.018 -22.999 1.00 57.54 P
ATOM 3 OP1 G B 40 3.097 -15.139 -23.853 1.00 60.44 O
ATOM 4 OP2 G B 40 5.434 -14.186 -23.477 1.00 53.80 O
ATOM 5 O5' G B 40 3.886 -14.569 -21.531 1.00 61.21 O
ATOM 6 C5' G B 40 2.722 -15.092 -20.908 1.00 58.07 C
ATOM 7 C4' G B 40 2.363 -14.306 -19.675 1.00 56.17 C
ATOM 8 O4' G B 40 3.408 -14.460 -18.676 1.00 55.65 O
ATOM 9 C3' G B 40 2.260 -12.800 -19.860 1.00 57.38 C
ATOM 10 O3' G B 40 1.026 -12.383 -20.416 1.00 53.62 O
ATOM 11 C2' G B 40 2.509 -12.282 -18.454 1.00 60.36 C
ATOM 12 O2' G B 40 1.366 -12.481 -17.635 1.00 64.06 O
ATOM 13 C1' G B 40 3.605 -13.238 -17.992 1.00 58.89 C
ATOM 14 N9 G B 40 4.948 -12.727 -18.329 1.00 58.67 N
ATOM 15 C8 G B 40 5.676 -13.012 -19.460 1.00 57.31 C
ATOM 16 N7 G B 40 6.832 -12.409 -19.495 1.00 58.21 N
ATOM 17 C5 G B 40 6.873 -11.678 -18.316 1.00 60.61 C
ATOM 18 C6 G B 40 7.881 -10.823 -17.800 1.00 60.65 C
ATOM 19 O6 G B 40 8.974 -10.535 -18.302 1.00 59.55 O
ATOM 20 N1 G B 40 7.516 -10.281 -16.572 1.00 63.98 N
ATOM 21 C2 G B 40 6.328 -10.531 -15.927 1.00 61.71 C
ATOM 22 N2 G B 40 6.148 -9.918 -14.751 1.00 60.53 N
ATOM 23 N3 G B 40 5.379 -11.324 -16.394 1.00 62.32 N
ATOM 24 C4 G B 40 5.717 -11.862 -17.585 1.00 60.49 C
ATOM 25 P G B 41 0.938 -10.998 -21.226 1.00 54.84 P
ATOM 26 OP1 G B 41 -0.394 -10.955 -21.878 1.00 64.61 O
ATOM 27 OP2 G B 41 2.148 -10.915 -22.076 1.00 57.44 O
ATOM 28 O5' G B 41 1.014 -9.905 -20.068 1.00 59.50 O
TER
ATOM 2 P G A 41 0.938 -10.998 -21.226 1.00 54.84 P
ATOM 3 OP1 G A 41 -0.394 -10.955 -21.878 1.00 64.61 O
ATOM 4 OP2 G A 41 2.148 -10.915 -22.076 1.00 57.44 O
ATOM 5 O5' G A 41 1.014 -9.905 -20.068 1.00 59.50 O
ATOM 6 C5' G A 41 0.040 -9.873 -19.036 1.00 57.39 C
ATOM 7 C4' G A 41 0.428 -8.925 -17.929 1.00 58.26 C
ATOM 8 O4' G A 41 1.598 -9.428 -17.230 1.00 58.26 O
ATOM 9 C3' G A 41 0.845 -7.528 -18.354 1.00 56.22 C
ATOM 10 O3' G A 41 -0.248 -6.689 -18.677 1.00 53.77 O
ATOM 11 C2' G A 41 1.647 -7.059 -17.153 1.00 62.80 C
ATOM 12 O2' G A 41 0.785 -6.721 -16.076 1.00 63.08 O
ATOM 13 C1' G A 41 2.389 -8.342 -16.787 1.00 62.91 C
ATOM 14 N9 G A 41 3.701 -8.412 -17.455 1.00 67.15 N
ATOM 15 C8 G A 41 4.021 -9.066 -18.622 1.00 64.56 C
ATOM 16 N7 G A 41 5.273 -8.918 -18.966 1.00 64.66 N
ATOM 17 C5 G A 41 5.804 -8.107 -17.968 1.00 65.18 C
ATOM 18 C6 G A 41 7.118 -7.599 -17.790 1.00 64.61 C
ATOM 19 O6 G A 41 8.109 -7.774 -18.507 1.00 62.80 O
ATOM 20 N1 G A 41 7.219 -6.818 -16.642 1.00 65.71 N
ATOM 21 C2 G A 41 6.192 -6.555 -15.773 1.00 66.43 C
ATOM 22 N2 G A 41 6.485 -5.779 -14.722 1.00 62.10 N
ATOM 23 N3 G A 41 4.965 -7.019 -15.925 1.00 65.40 N
ATOM 24 C4 G A 41 4.845 -7.783 -17.032 1.00 64.59 C
ATOM 25 P G A 42 -0.055 -5.493 -19.733 1.00 59.15 P
ATOM 26 OP1 G A 42 -1.401 -4.943 -20.021 1.00 67.75 O
ATOM 27 OP2 G A 42 0.751 -6.030 -20.857 1.00 57.97 O
ATOM 28 O5' G A 42 0.801 -4.429 -18.914 1.00 61.45 O
TER
ATOM 1 O3' C B 39 4.875 -16.502 -22.770 1.00 51.87 O
ATOM 2 P G B 40 4.305 -15.018 -22.999 1.00 57.54 P
ATOM 3 OP1 G B 40 3.097 -15.139 -23.853 1.00 60.44 O
ATOM 4 OP2 G B 40 5.434 -14.186 -23.477 1.00 53.80 O
ATOM 5 O5' G B 40 3.886 -14.569 -21.531 1.00 61.21 O
ATOM 6 C5' G B 40 2.722 -15.092 -20.908 1.00 58.07 C
ATOM 7 C4' G B 40 2.363 -14.306 -19.675 1.00 56.17 C
ATOM 8 O4' G B 40 3.408 -14.460 -18.676 1.00 55.65 O
ATOM 9 C3' G B 40 2.260 -12.800 -19.860 1.00 57.38 C
ATOM 10 O3' G B 40 1.026 -12.383 -20.416 1.00 53.62 O
ATOM 11 C2' G B 40 2.509 -12.282 -18.454 1.00 60.36 C
ATOM 12 O2' G B 40 1.366 -12.481 -17.635 1.00 64.06 O
ATOM 13 C1' G B 40 3.605 -13.238 -17.992 1.00 58.89 C
ATOM 14 N9 G B 40 4.948 -12.727 -18.329 1.00 58.67 N
ATOM 15 C8 G B 40 5.676 -13.012 -19.460 1.00 57.31 C
ATOM 16 N7 G B 40 6.832 -12.409 -19.495 1.00 58.21 N
ATOM 17 C5 G B 40 6.873 -11.678 -18.316 1.00 60.61 C
ATOM 18 C6 G B 40 7.881 -10.823 -17.800 1.00 60.65 C
ATOM 19 O6 G B 40 8.974 -10.535 -18.302 1.00 59.55 O
ATOM 20 N1 G B 40 7.516 -10.281 -16.572 1.00 63.98 N
ATOM 21 C2 G B 40 6.328 -10.531 -15.927 1.00 61.71 C
ATOM 22 N2 G B 40 6.148 -9.918 -14.751 1.00 60.53 N
ATOM 23 N3 G B 40 5.379 -11.324 -16.394 1.00 62.32 N
ATOM 24 C4 G B 40 5.717 -11.862 -17.585 1.00 60.49 C
ATOM 25 P G B 41 0.938 -10.998 -21.226 1.00 54.84 P
ATOM 26 OP1 G B 41 -0.394 -10.955 -21.878 1.00 64.61 O
ATOM 27 OP2 G B 41 2.148 -10.915 -22.076 1.00 57.44 O
ATOM 28 O5' G B 41 1.014 -9.905 -20.068 1.00 59.50 O
TER
Atoms:
OP1: (-0.394,-10.955,-21.878)
OP2: (2.148,-10.915,-22.076)
C3': (0.845,-7.528,-18.354)
C1': (2.389,-8.342,-16.787)
C5': (0.040,-9.873,-19.036)
O6: (8.109,-7.774,-18.507)
O4': (1.598,-9.428,-17.230)
C8: (4.021,-9.066,-18.622)
C2: (6.192,-6.555,-15.773)
C6: (7.118,-7.599,-17.790)
C5: (5.804,-8.107,-17.968)
C4: (4.845,-7.783,-17.032)
P: (0.938,-10.998,-21.226)
C4': (0.428,-8.925,-17.929)
C2': (1.647,-7.059,-17.153)
O2': (0.785,-6.721,-16.076)
N1: (7.219,-6.818,-16.642)
N2: (6.485,-5.779,-14.722)
N3: (4.965,-7.019,-15.925)
N7: (5.273,-8.918,-18.966)
N9: (3.701,-8.412,-17.455)
O5': (1.014,-9.905,-20.068)
O3': (-0.248,-6.689,-18.677)
OP2: (2.148,-10.915,-22.076)
C3': (0.845,-7.528,-18.354)
C1': (2.389,-8.342,-16.787)
C5': (0.040,-9.873,-19.036)
O6: (8.109,-7.774,-18.507)
O4': (1.598,-9.428,-17.230)
C8: (4.021,-9.066,-18.622)
C2: (6.192,-6.555,-15.773)
C6: (7.118,-7.599,-17.790)
C5: (5.804,-8.107,-17.968)
C4: (4.845,-7.783,-17.032)
P: (0.938,-10.998,-21.226)
C4': (0.428,-8.925,-17.929)
C2': (1.647,-7.059,-17.153)
O2': (0.785,-6.721,-16.076)
N1: (7.219,-6.818,-16.642)
N2: (6.485,-5.779,-14.722)
N3: (4.965,-7.019,-15.925)
N7: (5.273,-8.918,-18.966)
N9: (3.701,-8.412,-17.455)
O5': (1.014,-9.905,-20.068)
O3': (-0.248,-6.689,-18.677)
OP1: (3.097,-15.139,-23.853)
OP2: (5.434,-14.186,-23.477)
C3': (2.260,-12.800,-19.860)
C1': (3.605,-13.238,-17.992)
C5': (2.722,-15.092,-20.908)
O6: (8.974,-10.535,-18.302)
O4': (3.408,-14.460,-18.676)
C8: (5.676,-13.012,-19.460)
C2: (6.328,-10.531,-15.927)
C6: (7.881,-10.823,-17.800)
C5: (6.873,-11.678,-18.316)
C4: (5.717,-11.862,-17.585)
P: (4.305,-15.018,-22.999)
C4': (2.363,-14.306,-19.675)
C2': (2.509,-12.282,-18.454)
O2': (1.366,-12.481,-17.635)
N1: (7.516,-10.281,-16.572)
N2: (6.148,-9.918,-14.751)
N3: (5.379,-11.324,-16.394)
N7: (6.832,-12.409,-19.495)
N9: (4.948,-12.727,-18.329)
O5': (3.886,-14.569,-21.531)
O3': (1.026,-12.383,-20.416)
OP2: (5.434,-14.186,-23.477)
C3': (2.260,-12.800,-19.860)
C1': (3.605,-13.238,-17.992)
C5': (2.722,-15.092,-20.908)
O6: (8.974,-10.535,-18.302)
O4': (3.408,-14.460,-18.676)
C8: (5.676,-13.012,-19.460)
C2: (6.328,-10.531,-15.927)
C6: (7.881,-10.823,-17.800)
C5: (6.873,-11.678,-18.316)
C4: (5.717,-11.862,-17.585)
P: (4.305,-15.018,-22.999)
C4': (2.363,-14.306,-19.675)
C2': (2.509,-12.282,-18.454)
O2': (1.366,-12.481,-17.635)
N1: (7.516,-10.281,-16.572)
N2: (6.148,-9.918,-14.751)
N3: (5.379,-11.324,-16.394)
N7: (6.832,-12.409,-19.495)
N9: (4.948,-12.727,-18.329)
O5': (3.886,-14.569,-21.531)
O3': (1.026,-12.383,-20.416)
Image (generated by PyMOL):