Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1789:1788
Extra
PDB:
ATOM 1 O3' G A 788 -42.816 39.751 108.723 1.00 72.87 O
ATOM 2 P G A 789 -44.105 39.481 109.627 1.00 76.84 P
ATOM 3 OP1 G A 789 -45.272 39.985 108.882 1.00 77.30 O
ATOM 4 OP2 G A 789 -43.820 40.019 110.988 1.00 77.25 O
ATOM 5 O5' G A 789 -44.165 37.902 109.683 1.00 76.34 O
ATOM 6 C5' G A 789 -44.508 37.145 108.547 1.00 75.96 C
ATOM 7 C4' G A 789 -44.393 35.690 108.843 1.00 75.50 C
ATOM 8 O4' G A 789 -43.044 35.391 109.289 1.00 74.99 O
ATOM 9 C3' G A 789 -45.257 35.200 109.970 1.00 75.93 C
ATOM 10 O3' G A 789 -46.591 34.998 109.578 1.00 76.29 O
ATOM 11 C2' G A 789 -44.544 33.934 110.401 1.00 75.35 C
ATOM 12 O2' G A 789 -44.807 32.866 109.501 1.00 74.91 O
ATOM 13 C1' G A 789 -43.080 34.366 110.258 1.00 74.91 C
ATOM 14 N9 G A 789 -42.588 34.904 111.538 1.00 75.20 N
ATOM 15 C8 G A 789 -42.584 36.208 111.964 1.00 75.72 C
ATOM 16 N7 G A 789 -42.176 36.335 113.198 1.00 75.92 N
ATOM 17 C5 G A 789 -41.916 35.041 113.620 1.00 75.52 C
ATOM 18 C6 G A 789 -41.459 34.554 114.865 1.00 75.52 C
ATOM 19 O6 G A 789 -41.179 35.166 115.893 1.00 75.89 O
ATOM 20 N1 G A 789 -41.345 33.188 114.862 1.00 75.05 N
ATOM 21 C2 G A 789 -41.621 32.388 113.797 1.00 74.62 C
ATOM 22 N2 G A 789 -41.432 31.077 114.007 1.00 74.22 N
ATOM 23 N3 G A 789 -42.061 32.819 112.634 1.00 74.62 N
ATOM 24 C4 G A 789 -42.186 34.150 112.616 1.00 75.08 C
ATOM 25 P A A 790 -47.786 35.649 110.426 1.00 71.96 P
ATOM 26 OP1 A A 790 -49.027 35.326 109.718 1.00 72.19 O
ATOM 27 OP2 A A 790 -47.446 37.070 110.655 1.00 72.35 O
ATOM 28 O5' A A 790 -47.726 34.847 111.798 1.00 72.01 O
TER
ATOM 1 O3' A B 787 -38.462 43.322 111.285 1.00 74.63 O
ATOM 2 P G B 788 -39.828 42.742 111.879 1.00 73.60 P
ATOM 3 OP1 G B 788 -40.877 43.773 111.687 1.00 74.31 O
ATOM 4 OP2 G B 788 -39.533 42.275 113.245 1.00 73.67 O
ATOM 5 O5' G B 788 -40.118 41.502 110.931 1.00 73.02 O
ATOM 6 C5' G B 788 -40.411 41.702 109.563 1.00 72.87 C
ATOM 7 C4' G B 788 -40.450 40.402 108.812 1.00 72.24 C
ATOM 8 O4' G B 788 -39.223 39.660 109.050 1.00 71.59 O
ATOM 9 C3' G B 788 -41.536 39.420 109.219 1.00 72.39 C
ATOM 10 O3' G B 788 -42.816 39.751 108.723 1.00 72.87 O
ATOM 11 C2' G B 788 -40.984 38.101 108.690 1.00 71.62 C
ATOM 12 O2' G B 788 -41.127 38.023 107.278 1.00 71.33 O
ATOM 13 C1' G B 788 -39.493 38.264 109.026 1.00 71.21 C
ATOM 14 N9 G B 788 -39.172 37.697 110.356 1.00 71.21 N
ATOM 15 C8 G B 788 -38.999 38.377 111.546 1.00 71.67 C
ATOM 16 N7 G B 788 -38.783 37.586 112.560 1.00 71.58 N
ATOM 17 C5 G B 788 -38.821 36.300 112.007 1.00 71.03 C
ATOM 18 C6 G B 788 -38.645 35.009 112.614 1.00 70.70 C
ATOM 19 O6 G B 788 -38.415 34.724 113.812 1.00 70.84 O
ATOM 20 N1 G B 788 -38.778 33.990 111.662 1.00 70.19 N
ATOM 21 C2 G B 788 -39.040 34.184 110.321 1.00 70.02 C
ATOM 22 N2 G B 788 -39.135 33.087 109.563 1.00 69.53 N
ATOM 23 N3 G B 788 -39.192 35.363 109.753 1.00 70.31 N
ATOM 24 C4 G B 788 -39.068 36.362 110.648 1.00 70.80 C
ATOM 25 P G B 789 -44.105 39.481 109.627 1.00 76.84 P
ATOM 26 OP1 G B 789 -45.272 39.985 108.882 1.00 77.30 O
ATOM 27 OP2 G B 789 -43.820 40.019 110.988 1.00 77.25 O
ATOM 28 O5' G B 789 -44.165 37.902 109.683 1.00 76.34 O
TER
ATOM 2 P G A 789 -44.105 39.481 109.627 1.00 76.84 P
ATOM 3 OP1 G A 789 -45.272 39.985 108.882 1.00 77.30 O
ATOM 4 OP2 G A 789 -43.820 40.019 110.988 1.00 77.25 O
ATOM 5 O5' G A 789 -44.165 37.902 109.683 1.00 76.34 O
ATOM 6 C5' G A 789 -44.508 37.145 108.547 1.00 75.96 C
ATOM 7 C4' G A 789 -44.393 35.690 108.843 1.00 75.50 C
ATOM 8 O4' G A 789 -43.044 35.391 109.289 1.00 74.99 O
ATOM 9 C3' G A 789 -45.257 35.200 109.970 1.00 75.93 C
ATOM 10 O3' G A 789 -46.591 34.998 109.578 1.00 76.29 O
ATOM 11 C2' G A 789 -44.544 33.934 110.401 1.00 75.35 C
ATOM 12 O2' G A 789 -44.807 32.866 109.501 1.00 74.91 O
ATOM 13 C1' G A 789 -43.080 34.366 110.258 1.00 74.91 C
ATOM 14 N9 G A 789 -42.588 34.904 111.538 1.00 75.20 N
ATOM 15 C8 G A 789 -42.584 36.208 111.964 1.00 75.72 C
ATOM 16 N7 G A 789 -42.176 36.335 113.198 1.00 75.92 N
ATOM 17 C5 G A 789 -41.916 35.041 113.620 1.00 75.52 C
ATOM 18 C6 G A 789 -41.459 34.554 114.865 1.00 75.52 C
ATOM 19 O6 G A 789 -41.179 35.166 115.893 1.00 75.89 O
ATOM 20 N1 G A 789 -41.345 33.188 114.862 1.00 75.05 N
ATOM 21 C2 G A 789 -41.621 32.388 113.797 1.00 74.62 C
ATOM 22 N2 G A 789 -41.432 31.077 114.007 1.00 74.22 N
ATOM 23 N3 G A 789 -42.061 32.819 112.634 1.00 74.62 N
ATOM 24 C4 G A 789 -42.186 34.150 112.616 1.00 75.08 C
ATOM 25 P A A 790 -47.786 35.649 110.426 1.00 71.96 P
ATOM 26 OP1 A A 790 -49.027 35.326 109.718 1.00 72.19 O
ATOM 27 OP2 A A 790 -47.446 37.070 110.655 1.00 72.35 O
ATOM 28 O5' A A 790 -47.726 34.847 111.798 1.00 72.01 O
TER
ATOM 1 O3' A B 787 -38.462 43.322 111.285 1.00 74.63 O
ATOM 2 P G B 788 -39.828 42.742 111.879 1.00 73.60 P
ATOM 3 OP1 G B 788 -40.877 43.773 111.687 1.00 74.31 O
ATOM 4 OP2 G B 788 -39.533 42.275 113.245 1.00 73.67 O
ATOM 5 O5' G B 788 -40.118 41.502 110.931 1.00 73.02 O
ATOM 6 C5' G B 788 -40.411 41.702 109.563 1.00 72.87 C
ATOM 7 C4' G B 788 -40.450 40.402 108.812 1.00 72.24 C
ATOM 8 O4' G B 788 -39.223 39.660 109.050 1.00 71.59 O
ATOM 9 C3' G B 788 -41.536 39.420 109.219 1.00 72.39 C
ATOM 10 O3' G B 788 -42.816 39.751 108.723 1.00 72.87 O
ATOM 11 C2' G B 788 -40.984 38.101 108.690 1.00 71.62 C
ATOM 12 O2' G B 788 -41.127 38.023 107.278 1.00 71.33 O
ATOM 13 C1' G B 788 -39.493 38.264 109.026 1.00 71.21 C
ATOM 14 N9 G B 788 -39.172 37.697 110.356 1.00 71.21 N
ATOM 15 C8 G B 788 -38.999 38.377 111.546 1.00 71.67 C
ATOM 16 N7 G B 788 -38.783 37.586 112.560 1.00 71.58 N
ATOM 17 C5 G B 788 -38.821 36.300 112.007 1.00 71.03 C
ATOM 18 C6 G B 788 -38.645 35.009 112.614 1.00 70.70 C
ATOM 19 O6 G B 788 -38.415 34.724 113.812 1.00 70.84 O
ATOM 20 N1 G B 788 -38.778 33.990 111.662 1.00 70.19 N
ATOM 21 C2 G B 788 -39.040 34.184 110.321 1.00 70.02 C
ATOM 22 N2 G B 788 -39.135 33.087 109.563 1.00 69.53 N
ATOM 23 N3 G B 788 -39.192 35.363 109.753 1.00 70.31 N
ATOM 24 C4 G B 788 -39.068 36.362 110.648 1.00 70.80 C
ATOM 25 P G B 789 -44.105 39.481 109.627 1.00 76.84 P
ATOM 26 OP1 G B 789 -45.272 39.985 108.882 1.00 77.30 O
ATOM 27 OP2 G B 789 -43.820 40.019 110.988 1.00 77.25 O
ATOM 28 O5' G B 789 -44.165 37.902 109.683 1.00 76.34 O
TER
Atoms:
OP1: (-45.272,39.985,108.882)
OP2: (-43.820,40.019,110.988)
C3': (-45.257,35.200,109.970)
C1': (-43.080,34.366,110.258)
C5': (-44.508,37.145,108.547)
O6: (-41.179,35.166,115.893)
O4': (-43.044,35.391,109.289)
C8: (-42.584,36.208,111.964)
C2: (-41.621,32.388,113.797)
C6: (-41.459,34.554,114.865)
C5: (-41.916,35.041,113.620)
C4: (-42.186,34.150,112.616)
P: (-44.105,39.481,109.627)
C4': (-44.393,35.690,108.843)
C2': (-44.544,33.934,110.401)
O2': (-44.807,32.866,109.501)
N1: (-41.345,33.188,114.862)
N2: (-41.432,31.077,114.007)
N3: (-42.061,32.819,112.634)
N7: (-42.176,36.335,113.198)
N9: (-42.588,34.904,111.538)
O5': (-44.165,37.902,109.683)
O3': (-46.591,34.998,109.578)
OP2: (-43.820,40.019,110.988)
C3': (-45.257,35.200,109.970)
C1': (-43.080,34.366,110.258)
C5': (-44.508,37.145,108.547)
O6: (-41.179,35.166,115.893)
O4': (-43.044,35.391,109.289)
C8: (-42.584,36.208,111.964)
C2: (-41.621,32.388,113.797)
C6: (-41.459,34.554,114.865)
C5: (-41.916,35.041,113.620)
C4: (-42.186,34.150,112.616)
P: (-44.105,39.481,109.627)
C4': (-44.393,35.690,108.843)
C2': (-44.544,33.934,110.401)
O2': (-44.807,32.866,109.501)
N1: (-41.345,33.188,114.862)
N2: (-41.432,31.077,114.007)
N3: (-42.061,32.819,112.634)
N7: (-42.176,36.335,113.198)
N9: (-42.588,34.904,111.538)
O5': (-44.165,37.902,109.683)
O3': (-46.591,34.998,109.578)
OP1: (-40.877,43.773,111.687)
OP2: (-39.533,42.275,113.245)
C3': (-41.536,39.420,109.219)
C1': (-39.493,38.264,109.026)
C5': (-40.411,41.702,109.563)
O6: (-38.415,34.724,113.812)
O4': (-39.223,39.660,109.050)
C8: (-38.999,38.377,111.546)
C2: (-39.040,34.184,110.321)
C6: (-38.645,35.009,112.614)
C5: (-38.821,36.300,112.007)
C4: (-39.068,36.362,110.648)
P: (-39.828,42.742,111.879)
C4': (-40.450,40.402,108.812)
C2': (-40.984,38.101,108.690)
O2': (-41.127,38.023,107.278)
N1: (-38.778,33.990,111.662)
N2: (-39.135,33.087,109.563)
N3: (-39.192,35.363,109.753)
N7: (-38.783,37.586,112.560)
N9: (-39.172,37.697,110.356)
O5': (-40.118,41.502,110.931)
O3': (-42.816,39.751,108.723)
OP2: (-39.533,42.275,113.245)
C3': (-41.536,39.420,109.219)
C1': (-39.493,38.264,109.026)
C5': (-40.411,41.702,109.563)
O6: (-38.415,34.724,113.812)
O4': (-39.223,39.660,109.050)
C8: (-38.999,38.377,111.546)
C2: (-39.040,34.184,110.321)
C6: (-38.645,35.009,112.614)
C5: (-38.821,36.300,112.007)
C4: (-39.068,36.362,110.648)
P: (-39.828,42.742,111.879)
C4': (-40.450,40.402,108.812)
C2': (-40.984,38.101,108.690)
O2': (-41.127,38.023,107.278)
N1: (-38.778,33.990,111.662)
N2: (-39.135,33.087,109.563)
N3: (-39.192,35.363,109.753)
N7: (-38.783,37.586,112.560)
N9: (-39.172,37.697,110.356)
O5': (-40.118,41.502,110.931)
O3': (-42.816,39.751,108.723)
Image (generated by PyMOL):