ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A693:A692

Extra

PDB:
ATOM 1 O3' G A 692 -11.434 137.322 93.040 1.00 4.25 O
ATOM 2 P A A 693 -10.527 136.442 92.050 1.00 39.86 P
ATOM 3 OP1 A A 693 -10.066 135.257 92.811 1.00 24.61 O
ATOM 4 OP2 A A 693 -9.519 137.328 91.386 1.00 24.42 O
ATOM 5 O5' A A 693 -11.576 135.945 90.963 1.00 8.41 O
ATOM 6 C5' A A 693 -12.613 135.064 91.338 1.00 6.84 C
ATOM 7 C4' A A 693 -13.699 135.061 90.304 1.00 7.52 C
ATOM 8 O4' A A 693 -14.312 136.372 90.208 1.00 6.73 O
ATOM 9 C3' A A 693 -13.267 134.741 88.895 1.00 8.71 C
ATOM 10 O3' A A 693 -13.162 133.348 88.708 1.00 10.18 O
ATOM 11 C2' A A 693 -14.398 135.349 88.082 1.00 7.89 C
ATOM 12 O2' A A 693 -15.544 134.520 88.137 1.00 9.59 O
ATOM 13 C1' A A 693 -14.680 136.632 88.869 1.00 7.38 C
ATOM 14 N9 A A 693 -13.873 137.766 88.411 1.00 25.39 N
ATOM 15 C8 A A 693 -12.576 138.049 88.764 1.00 26.43 C
ATOM 16 N7 A A 693 -12.092 139.123 88.191 1.00 25.84 N
ATOM 17 C5 A A 693 -13.140 139.584 87.413 1.00 24.75 C
ATOM 18 C6 A A 693 -13.260 140.689 86.567 1.00 24.94 C
ATOM 19 N6 A A 693 -12.283 141.572 86.368 1.00 24.47 N
ATOM 20 N1 A A 693 -14.434 140.863 85.925 1.00 25.80 N
ATOM 21 C2 A A 693 -15.416 139.979 86.139 1.00 26.06 C
ATOM 22 N3 A A 693 -15.426 138.901 86.920 1.00 25.95 N
ATOM 23 C4 A A 693 -14.244 138.758 87.537 1.00 24.59 C
ATOM 24 P A A 694 -12.247 132.788 87.519 1.00 9.74 P
ATOM 25 OP1 A A 694 -12.205 131.321 87.668 1.00 14.68 O
ATOM 26 OP2 A A 694 -10.981 133.552 87.469 1.00 13.79 O
ATOM 27 O5' A A 694 -13.134 133.108 86.239 1.00 28.72 O
TER

ATOM 1 O3' G B 691 -9.838 143.073 94.954 1.00 22.83 O
ATOM 2 P G B 692 -9.045 142.043 94.000 1.00 27.57 P
ATOM 3 OP1 G B 692 -8.108 141.307 94.900 1.00 46.52 O
ATOM 4 OP2 G B 692 -8.501 142.762 92.816 1.00 45.79 O
ATOM 5 O5' G B 692 -10.194 141.046 93.516 1.00 4.25 O
ATOM 6 C5' G B 692 -10.798 140.148 94.472 1.00 4.25 C
ATOM 7 C4' G B 692 -12.020 139.461 93.903 1.00 4.25 C
ATOM 8 O4' G B 692 -13.048 140.424 93.564 1.00 4.25 O
ATOM 9 C3' G B 692 -11.816 138.630 92.657 1.00 4.25 C
ATOM 10 O3' G B 692 -11.434 137.322 93.040 1.00 4.25 O
ATOM 11 C2' G B 692 -13.210 138.598 92.062 1.00 4.25 C
ATOM 12 O2' G B 692 -13.959 137.623 92.754 1.00 4.25 O
ATOM 13 C1' G B 692 -13.743 139.993 92.412 1.00 4.25 C
ATOM 14 N9 G B 692 -13.486 140.985 91.374 1.00 3.74 N
ATOM 15 C8 G B 692 -12.296 141.650 91.173 1.00 3.74 C
ATOM 16 N7 G B 692 -12.351 142.512 90.194 1.00 3.74 N
ATOM 17 C5 G B 692 -13.653 142.412 89.717 1.00 3.74 C
ATOM 18 C6 G B 692 -14.286 143.111 88.680 1.00 3.74 C
ATOM 19 O6 G B 692 -13.815 143.988 87.965 1.00 4.48 O
ATOM 20 N1 G B 692 -15.598 142.706 88.506 1.00 3.74 N
ATOM 21 C2 G B 692 -16.222 141.745 89.239 1.00 3.74 C
ATOM 22 N2 G B 692 -17.497 141.497 88.901 1.00 3.74 N
ATOM 23 N3 G B 692 -15.641 141.074 90.232 1.00 3.74 N
ATOM 24 C4 G B 692 -14.364 141.464 90.418 1.00 3.74 C
ATOM 25 P A B 693 -10.527 136.442 92.050 1.00 39.86 P
ATOM 26 OP1 A B 693 -10.066 135.257 92.811 1.00 24.61 O
ATOM 27 OP2 A B 693 -9.519 137.328 91.386 1.00 24.42 O
ATOM 28 O5' A B 693 -11.576 135.945 90.963 1.00 8.41 O
TER

Atoms:
OP1: (-10.066,135.257,92.811)
OP2: (-9.519,137.328,91.386)
C3': (-13.267,134.741,88.895)
C1': (-14.680,136.632,88.869)
C5': (-12.613,135.064,91.338)
O4': (-14.312,136.372,90.208)
C8: (-12.576,138.049,88.764)
O2': (-15.544,134.520,88.137)
C6: (-13.260,140.689,86.567)
C5: (-13.140,139.584,87.413)
C4: (-14.244,138.758,87.537)
P: (-10.527,136.442,92.050)
C4': (-13.699,135.061,90.304)
C2': (-14.398,135.349,88.082)
C2: (-15.416,139.979,86.139)
N1: (-14.434,140.863,85.925)
N3: (-15.426,138.901,86.920)
N6: (-12.283,141.572,86.368)
N7: (-12.092,139.123,88.191)
N9: (-13.873,137.766,88.411)
O5': (-11.576,135.945,90.963)
O3': (-13.162,133.348,88.708)
OP1: (-8.108,141.307,94.900)
OP2: (-8.501,142.762,92.816)
C3': (-11.816,138.630,92.657)
C1': (-13.743,139.993,92.412)
C5': (-10.798,140.148,94.472)
O6: (-13.815,143.988,87.965)
O4': (-13.048,140.424,93.564)
C8: (-12.296,141.650,91.173)
C2: (-16.222,141.745,89.239)
C6: (-14.286,143.111,88.680)
C5: (-13.653,142.412,89.717)
C4: (-14.364,141.464,90.418)
P: (-9.045,142.043,94.000)
C4': (-12.020,139.461,93.903)
C2': (-13.210,138.598,92.062)
O2': (-13.959,137.623,92.754)
N1: (-15.598,142.706,88.506)
N2: (-17.497,141.497,88.901)
N3: (-15.641,141.074,90.232)
N7: (-12.351,142.512,90.194)
N9: (-13.486,140.985,91.374)
O5': (-10.194,141.046,93.516)
O3': (-11.434,137.322,93.040)
Image (generated by PyMOL):
PyMOL image
show in jmol