Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J6S:C4:C3
Extra
PDB:
ATOM 1 O3' G A 3 17.204 27.441 27.441 1.00 7.30 O
ATOM 2 P G A 4 17.030 27.675 28.984 1.00 8.40 P
ATOM 3 OP1 G A 4 16.839 26.334 29.659 1.00 10.75 O
ATOM 4 OP2 G A 4 16.061 28.736 29.185 1.00 9.26 O
ATOM 5 O5' G A 4 18.454 28.235 29.465 1.00 7.53 O
ATOM 6 C5' G A 4 19.597 27.369 29.478 1.00 8.43 C
ATOM 7 C4' G A 4 20.860 28.148 29.780 1.00 8.03 C
ATOM 8 O4' G A 4 21.104 29.155 28.764 1.00 7.72 O
ATOM 9 C3' G A 4 20.792 28.959 31.054 1.00 8.66 C
ATOM 10 O3' G A 4 20.991 28.107 32.180 1.00 10.27 O
ATOM 11 C2' G A 4 21.899 29.994 30.818 1.00 8.54 C
ATOM 12 O2' G A 4 23.169 29.423 31.022 1.00 9.71 O
ATOM 13 C1' G A 4 21.689 30.308 29.339 1.00 7.00 C
ATOM 14 N9 G A 4 20.787 31.432 29.109 1.00 5.73 N
ATOM 15 C8 G A 4 19.397 31.432 29.011 1.00 5.21 C
ATOM 16 N7 G A 4 18.921 32.617 28.732 1.00 4.92 N
ATOM 17 C5 G A 4 20.045 33.443 28.649 1.00 4.65 C
ATOM 18 C6 G A 4 20.140 34.863 28.392 1.00 4.52 C
ATOM 19 O6 G A 4 19.247 35.657 28.205 1.00 3.99 O
ATOM 20 N1 G A 4 21.455 35.323 28.424 1.00 4.55 N
ATOM 21 C2 G A 4 22.550 34.523 28.721 1.00 5.03 C
ATOM 22 N2 G A 4 23.711 35.120 28.802 1.00 5.68 N
ATOM 23 N3 G A 4 22.492 33.189 28.951 1.00 5.13 N
ATOM 24 C4 G A 4 21.198 32.731 28.889 1.00 5.40 C
ATOM 25 P U A 5 20.522 28.588 33.610 1.00 11.64 P
ATOM 26 OP1 U A 5 20.994 29.951 33.918 1.00 12.90 O
ATOM 27 OP2 U A 5 20.854 27.505 34.556 1.00 12.43 O
ATOM 28 O5' U A 5 18.949 28.610 33.476 1.00 11.96 O
TER
ATOM 1 O3' A B 2 12.824 29.829 23.976 1.00 6.83 O
ATOM 2 P G B 3 13.034 29.737 25.566 1.00 6.86 P
ATOM 3 OP1 G B 3 12.196 28.590 26.023 1.00 7.74 O
ATOM 4 OP2 G B 3 12.851 31.061 26.144 1.00 8.41 O
ATOM 5 O5' G B 3 14.578 29.376 25.677 1.00 7.30 O
ATOM 6 C5' G B 3 15.122 28.150 25.168 1.00 6.98 C
ATOM 7 C4' G B 3 16.645 28.208 25.203 1.00 6.50 C
ATOM 8 O4' G B 3 17.155 29.256 24.336 1.00 5.70 O
ATOM 9 C3' G B 3 17.201 28.575 26.561 1.00 6.83 C
ATOM 10 O3' G B 3 17.204 27.441 27.441 1.00 7.30 O
ATOM 11 C2' G B 3 18.585 29.096 26.201 1.00 6.56 C
ATOM 12 O2' G B 3 19.482 28.028 25.943 1.00 7.70 O
ATOM 13 C1' G B 3 18.294 29.857 24.919 1.00 5.29 C
ATOM 14 N9 G B 3 17.954 31.257 25.140 1.00 4.36 N
ATOM 15 C8 G B 3 16.712 31.816 25.252 1.00 4.87 C
ATOM 16 N7 G B 3 16.746 33.131 25.332 1.00 3.76 N
ATOM 17 C5 G B 3 18.086 33.445 25.272 1.00 4.25 C
ATOM 18 C6 G B 3 18.726 34.703 25.258 1.00 4.24 C
ATOM 19 O6 G B 3 18.207 35.819 25.331 1.00 4.52 O
ATOM 20 N1 G B 3 20.095 34.579 25.179 1.00 4.55 N
ATOM 21 C2 G B 3 20.769 33.356 25.180 1.00 4.25 C
ATOM 22 N2 G B 3 22.099 33.391 25.215 1.00 4.91 N
ATOM 23 N3 G B 3 20.162 32.184 25.174 1.00 4.78 N
ATOM 24 C4 G B 3 18.856 32.302 25.212 1.00 4.73 C
ATOM 25 P G B 4 17.030 27.675 28.984 1.00 8.40 P
ATOM 26 OP1 G B 4 16.839 26.334 29.659 1.00 10.75 O
ATOM 27 OP2 G B 4 16.061 28.736 29.185 1.00 9.26 O
ATOM 28 O5' G B 4 18.454 28.235 29.465 1.00 7.53 O
TER
ATOM 2 P G A 4 17.030 27.675 28.984 1.00 8.40 P
ATOM 3 OP1 G A 4 16.839 26.334 29.659 1.00 10.75 O
ATOM 4 OP2 G A 4 16.061 28.736 29.185 1.00 9.26 O
ATOM 5 O5' G A 4 18.454 28.235 29.465 1.00 7.53 O
ATOM 6 C5' G A 4 19.597 27.369 29.478 1.00 8.43 C
ATOM 7 C4' G A 4 20.860 28.148 29.780 1.00 8.03 C
ATOM 8 O4' G A 4 21.104 29.155 28.764 1.00 7.72 O
ATOM 9 C3' G A 4 20.792 28.959 31.054 1.00 8.66 C
ATOM 10 O3' G A 4 20.991 28.107 32.180 1.00 10.27 O
ATOM 11 C2' G A 4 21.899 29.994 30.818 1.00 8.54 C
ATOM 12 O2' G A 4 23.169 29.423 31.022 1.00 9.71 O
ATOM 13 C1' G A 4 21.689 30.308 29.339 1.00 7.00 C
ATOM 14 N9 G A 4 20.787 31.432 29.109 1.00 5.73 N
ATOM 15 C8 G A 4 19.397 31.432 29.011 1.00 5.21 C
ATOM 16 N7 G A 4 18.921 32.617 28.732 1.00 4.92 N
ATOM 17 C5 G A 4 20.045 33.443 28.649 1.00 4.65 C
ATOM 18 C6 G A 4 20.140 34.863 28.392 1.00 4.52 C
ATOM 19 O6 G A 4 19.247 35.657 28.205 1.00 3.99 O
ATOM 20 N1 G A 4 21.455 35.323 28.424 1.00 4.55 N
ATOM 21 C2 G A 4 22.550 34.523 28.721 1.00 5.03 C
ATOM 22 N2 G A 4 23.711 35.120 28.802 1.00 5.68 N
ATOM 23 N3 G A 4 22.492 33.189 28.951 1.00 5.13 N
ATOM 24 C4 G A 4 21.198 32.731 28.889 1.00 5.40 C
ATOM 25 P U A 5 20.522 28.588 33.610 1.00 11.64 P
ATOM 26 OP1 U A 5 20.994 29.951 33.918 1.00 12.90 O
ATOM 27 OP2 U A 5 20.854 27.505 34.556 1.00 12.43 O
ATOM 28 O5' U A 5 18.949 28.610 33.476 1.00 11.96 O
TER
ATOM 1 O3' A B 2 12.824 29.829 23.976 1.00 6.83 O
ATOM 2 P G B 3 13.034 29.737 25.566 1.00 6.86 P
ATOM 3 OP1 G B 3 12.196 28.590 26.023 1.00 7.74 O
ATOM 4 OP2 G B 3 12.851 31.061 26.144 1.00 8.41 O
ATOM 5 O5' G B 3 14.578 29.376 25.677 1.00 7.30 O
ATOM 6 C5' G B 3 15.122 28.150 25.168 1.00 6.98 C
ATOM 7 C4' G B 3 16.645 28.208 25.203 1.00 6.50 C
ATOM 8 O4' G B 3 17.155 29.256 24.336 1.00 5.70 O
ATOM 9 C3' G B 3 17.201 28.575 26.561 1.00 6.83 C
ATOM 10 O3' G B 3 17.204 27.441 27.441 1.00 7.30 O
ATOM 11 C2' G B 3 18.585 29.096 26.201 1.00 6.56 C
ATOM 12 O2' G B 3 19.482 28.028 25.943 1.00 7.70 O
ATOM 13 C1' G B 3 18.294 29.857 24.919 1.00 5.29 C
ATOM 14 N9 G B 3 17.954 31.257 25.140 1.00 4.36 N
ATOM 15 C8 G B 3 16.712 31.816 25.252 1.00 4.87 C
ATOM 16 N7 G B 3 16.746 33.131 25.332 1.00 3.76 N
ATOM 17 C5 G B 3 18.086 33.445 25.272 1.00 4.25 C
ATOM 18 C6 G B 3 18.726 34.703 25.258 1.00 4.24 C
ATOM 19 O6 G B 3 18.207 35.819 25.331 1.00 4.52 O
ATOM 20 N1 G B 3 20.095 34.579 25.179 1.00 4.55 N
ATOM 21 C2 G B 3 20.769 33.356 25.180 1.00 4.25 C
ATOM 22 N2 G B 3 22.099 33.391 25.215 1.00 4.91 N
ATOM 23 N3 G B 3 20.162 32.184 25.174 1.00 4.78 N
ATOM 24 C4 G B 3 18.856 32.302 25.212 1.00 4.73 C
ATOM 25 P G B 4 17.030 27.675 28.984 1.00 8.40 P
ATOM 26 OP1 G B 4 16.839 26.334 29.659 1.00 10.75 O
ATOM 27 OP2 G B 4 16.061 28.736 29.185 1.00 9.26 O
ATOM 28 O5' G B 4 18.454 28.235 29.465 1.00 7.53 O
TER
Atoms:
OP1: (16.839,26.334,29.659)
OP2: (16.061,28.736,29.185)
C3': (20.792,28.959,31.054)
C1': (21.689,30.308,29.339)
C5': (19.597,27.369,29.478)
O6: (19.247,35.657,28.205)
O4': (21.104,29.155,28.764)
C8: (19.397,31.432,29.011)
C2: (22.550,34.523,28.721)
C6: (20.140,34.863,28.392)
C5: (20.045,33.443,28.649)
C4: (21.198,32.731,28.889)
P: (17.030,27.675,28.984)
C4': (20.860,28.148,29.780)
C2': (21.899,29.994,30.818)
O2': (23.169,29.423,31.022)
N1: (21.455,35.323,28.424)
N2: (23.711,35.120,28.802)
N3: (22.492,33.189,28.951)
N7: (18.921,32.617,28.732)
N9: (20.787,31.432,29.109)
O5': (18.454,28.235,29.465)
O3': (20.991,28.107,32.180)
OP2: (16.061,28.736,29.185)
C3': (20.792,28.959,31.054)
C1': (21.689,30.308,29.339)
C5': (19.597,27.369,29.478)
O6: (19.247,35.657,28.205)
O4': (21.104,29.155,28.764)
C8: (19.397,31.432,29.011)
C2: (22.550,34.523,28.721)
C6: (20.140,34.863,28.392)
C5: (20.045,33.443,28.649)
C4: (21.198,32.731,28.889)
P: (17.030,27.675,28.984)
C4': (20.860,28.148,29.780)
C2': (21.899,29.994,30.818)
O2': (23.169,29.423,31.022)
N1: (21.455,35.323,28.424)
N2: (23.711,35.120,28.802)
N3: (22.492,33.189,28.951)
N7: (18.921,32.617,28.732)
N9: (20.787,31.432,29.109)
O5': (18.454,28.235,29.465)
O3': (20.991,28.107,32.180)
OP1: (12.196,28.590,26.023)
OP2: (12.851,31.061,26.144)
C3': (17.201,28.575,26.561)
C1': (18.294,29.857,24.919)
C5': (15.122,28.150,25.168)
O6: (18.207,35.819,25.331)
O4': (17.155,29.256,24.336)
C8: (16.712,31.816,25.252)
C2: (20.769,33.356,25.180)
C6: (18.726,34.703,25.258)
C5: (18.086,33.445,25.272)
C4: (18.856,32.302,25.212)
P: (13.034,29.737,25.566)
C4': (16.645,28.208,25.203)
C2': (18.585,29.096,26.201)
O2': (19.482,28.028,25.943)
N1: (20.095,34.579,25.179)
N2: (22.099,33.391,25.215)
N3: (20.162,32.184,25.174)
N7: (16.746,33.131,25.332)
N9: (17.954,31.257,25.140)
O5': (14.578,29.376,25.677)
O3': (17.204,27.441,27.441)
OP2: (12.851,31.061,26.144)
C3': (17.201,28.575,26.561)
C1': (18.294,29.857,24.919)
C5': (15.122,28.150,25.168)
O6: (18.207,35.819,25.331)
O4': (17.155,29.256,24.336)
C8: (16.712,31.816,25.252)
C2: (20.769,33.356,25.180)
C6: (18.726,34.703,25.258)
C5: (18.086,33.445,25.272)
C4: (18.856,32.302,25.212)
P: (13.034,29.737,25.566)
C4': (16.645,28.208,25.203)
C2': (18.585,29.096,26.201)
O2': (19.482,28.028,25.943)
N1: (20.095,34.579,25.179)
N2: (22.099,33.391,25.215)
N3: (20.162,32.184,25.174)
N7: (16.746,33.131,25.332)
N9: (17.954,31.257,25.140)
O5': (14.578,29.376,25.677)
O3': (17.204,27.441,27.441)
Image (generated by PyMOL):