Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A116:A115
Extra
PDB:
ATOM 1 O3' G A 115 32.057 27.862 22.225 1.00 25.73 O
ATOM 2 P G A 116 31.841 29.138 21.287 1.00 25.39 P
ATOM 3 OP1 G A 116 31.086 30.142 22.065 1.00 25.21 O
ATOM 4 OP2 G A 116 31.347 28.665 19.982 1.00 24.67 O
ATOM 5 O5' G A 116 33.333 29.690 21.042 1.00 26.13 O
ATOM 6 C5' G A 116 34.101 30.216 22.126 1.00 27.01 C
ATOM 7 C4' G A 116 35.545 30.473 21.733 1.00 27.31 C
ATOM 8 O4' G A 116 36.068 29.340 21.005 1.00 27.31 O
ATOM 9 C3' G A 116 35.735 31.627 20.768 1.00 27.48 C
ATOM 10 O3' G A 116 35.729 32.876 21.442 1.00 27.38 O
ATOM 11 C2' G A 116 37.085 31.298 20.149 1.00 27.79 C
ATOM 12 O2' G A 116 38.177 31.617 20.988 1.00 29.16 O
ATOM 13 C1' G A 116 36.973 29.788 20.006 1.00 27.86 C
ATOM 14 N9 G A 116 36.540 29.327 18.679 1.00 27.88 N
ATOM 15 C8 G A 116 35.353 28.698 18.380 1.00 27.67 C
ATOM 16 N7 G A 116 35.229 28.386 17.123 1.00 27.49 N
ATOM 17 C5 G A 116 36.405 28.833 16.543 1.00 27.49 C
ATOM 18 C6 G A 116 36.834 28.767 15.194 1.00 27.68 C
ATOM 19 O6 G A 116 36.242 28.283 14.222 1.00 27.64 O
ATOM 20 N1 G A 116 38.097 29.334 15.012 1.00 28.03 N
ATOM 21 C2 G A 116 38.852 29.897 16.014 1.00 27.67 C
ATOM 22 N2 G A 116 40.040 30.389 15.632 1.00 27.54 N
ATOM 23 N3 G A 116 38.459 29.968 17.286 1.00 27.48 N
ATOM 24 C4 G A 116 37.230 29.416 17.484 1.00 27.46 C
ATOM 25 P G A 117 35.191 34.165 20.654 1.00 27.74 P
ATOM 26 OP1 G A 117 35.012 35.261 21.634 1.00 26.82 O
ATOM 27 OP2 G A 117 34.054 33.750 19.797 1.00 27.19 O
ATOM 28 O5' G A 117 36.418 34.490 19.680 1.00 27.68 O
TER
ATOM 1 O3' G B 114 30.496 22.267 20.282 1.00 25.03 O
ATOM 2 P G B 115 29.944 23.697 19.846 1.00 23.39 P
ATOM 3 OP1 G B 115 28.654 23.871 20.545 1.00 25.28 O
ATOM 4 OP2 G B 115 30.001 23.827 18.379 1.00 23.23 O
ATOM 5 O5' G B 115 31.015 24.675 20.506 1.00 23.74 O
ATOM 6 C5' G B 115 31.029 24.854 21.919 1.00 24.62 C
ATOM 7 C4' G B 115 32.353 25.432 22.377 1.00 25.48 C
ATOM 8 O4' G B 115 33.443 24.536 22.025 1.00 26.21 O
ATOM 9 C3' G B 115 32.751 26.729 21.697 1.00 26.05 C
ATOM 10 O3' G B 115 32.057 27.862 22.225 1.00 25.73 O
ATOM 11 C2' G B 115 34.251 26.723 21.976 1.00 26.34 C
ATOM 12 O2' G B 115 34.588 27.026 23.315 1.00 27.20 O
ATOM 13 C1' G B 115 34.579 25.272 21.631 1.00 26.27 C
ATOM 14 N9 G B 115 34.820 25.132 20.193 1.00 26.64 N
ATOM 15 C8 G B 115 33.960 24.675 19.215 1.00 26.23 C
ATOM 16 N7 G B 115 34.475 24.697 18.017 1.00 26.26 N
ATOM 17 C5 G B 115 35.752 25.216 18.198 1.00 26.49 C
ATOM 18 C6 G B 115 36.784 25.475 17.256 1.00 26.61 C
ATOM 19 O6 G B 115 36.762 25.286 16.029 1.00 26.57 O
ATOM 20 N1 G B 115 37.932 26.000 17.857 1.00 26.93 N
ATOM 21 C2 G B 115 38.056 26.241 19.209 1.00 27.12 C
ATOM 22 N2 G B 115 39.223 26.749 19.620 1.00 26.46 N
ATOM 23 N3 G B 115 37.099 26.003 20.102 1.00 26.74 N
ATOM 24 C4 G B 115 35.978 25.491 19.530 1.00 26.68 C
ATOM 25 P G B 116 31.841 29.138 21.287 1.00 25.39 P
ATOM 26 OP1 G B 116 31.086 30.142 22.065 1.00 25.21 O
ATOM 27 OP2 G B 116 31.347 28.665 19.982 1.00 24.67 O
ATOM 28 O5' G B 116 33.333 29.690 21.042 1.00 26.13 O
TER
ATOM 2 P G A 116 31.841 29.138 21.287 1.00 25.39 P
ATOM 3 OP1 G A 116 31.086 30.142 22.065 1.00 25.21 O
ATOM 4 OP2 G A 116 31.347 28.665 19.982 1.00 24.67 O
ATOM 5 O5' G A 116 33.333 29.690 21.042 1.00 26.13 O
ATOM 6 C5' G A 116 34.101 30.216 22.126 1.00 27.01 C
ATOM 7 C4' G A 116 35.545 30.473 21.733 1.00 27.31 C
ATOM 8 O4' G A 116 36.068 29.340 21.005 1.00 27.31 O
ATOM 9 C3' G A 116 35.735 31.627 20.768 1.00 27.48 C
ATOM 10 O3' G A 116 35.729 32.876 21.442 1.00 27.38 O
ATOM 11 C2' G A 116 37.085 31.298 20.149 1.00 27.79 C
ATOM 12 O2' G A 116 38.177 31.617 20.988 1.00 29.16 O
ATOM 13 C1' G A 116 36.973 29.788 20.006 1.00 27.86 C
ATOM 14 N9 G A 116 36.540 29.327 18.679 1.00 27.88 N
ATOM 15 C8 G A 116 35.353 28.698 18.380 1.00 27.67 C
ATOM 16 N7 G A 116 35.229 28.386 17.123 1.00 27.49 N
ATOM 17 C5 G A 116 36.405 28.833 16.543 1.00 27.49 C
ATOM 18 C6 G A 116 36.834 28.767 15.194 1.00 27.68 C
ATOM 19 O6 G A 116 36.242 28.283 14.222 1.00 27.64 O
ATOM 20 N1 G A 116 38.097 29.334 15.012 1.00 28.03 N
ATOM 21 C2 G A 116 38.852 29.897 16.014 1.00 27.67 C
ATOM 22 N2 G A 116 40.040 30.389 15.632 1.00 27.54 N
ATOM 23 N3 G A 116 38.459 29.968 17.286 1.00 27.48 N
ATOM 24 C4 G A 116 37.230 29.416 17.484 1.00 27.46 C
ATOM 25 P G A 117 35.191 34.165 20.654 1.00 27.74 P
ATOM 26 OP1 G A 117 35.012 35.261 21.634 1.00 26.82 O
ATOM 27 OP2 G A 117 34.054 33.750 19.797 1.00 27.19 O
ATOM 28 O5' G A 117 36.418 34.490 19.680 1.00 27.68 O
TER
ATOM 1 O3' G B 114 30.496 22.267 20.282 1.00 25.03 O
ATOM 2 P G B 115 29.944 23.697 19.846 1.00 23.39 P
ATOM 3 OP1 G B 115 28.654 23.871 20.545 1.00 25.28 O
ATOM 4 OP2 G B 115 30.001 23.827 18.379 1.00 23.23 O
ATOM 5 O5' G B 115 31.015 24.675 20.506 1.00 23.74 O
ATOM 6 C5' G B 115 31.029 24.854 21.919 1.00 24.62 C
ATOM 7 C4' G B 115 32.353 25.432 22.377 1.00 25.48 C
ATOM 8 O4' G B 115 33.443 24.536 22.025 1.00 26.21 O
ATOM 9 C3' G B 115 32.751 26.729 21.697 1.00 26.05 C
ATOM 10 O3' G B 115 32.057 27.862 22.225 1.00 25.73 O
ATOM 11 C2' G B 115 34.251 26.723 21.976 1.00 26.34 C
ATOM 12 O2' G B 115 34.588 27.026 23.315 1.00 27.20 O
ATOM 13 C1' G B 115 34.579 25.272 21.631 1.00 26.27 C
ATOM 14 N9 G B 115 34.820 25.132 20.193 1.00 26.64 N
ATOM 15 C8 G B 115 33.960 24.675 19.215 1.00 26.23 C
ATOM 16 N7 G B 115 34.475 24.697 18.017 1.00 26.26 N
ATOM 17 C5 G B 115 35.752 25.216 18.198 1.00 26.49 C
ATOM 18 C6 G B 115 36.784 25.475 17.256 1.00 26.61 C
ATOM 19 O6 G B 115 36.762 25.286 16.029 1.00 26.57 O
ATOM 20 N1 G B 115 37.932 26.000 17.857 1.00 26.93 N
ATOM 21 C2 G B 115 38.056 26.241 19.209 1.00 27.12 C
ATOM 22 N2 G B 115 39.223 26.749 19.620 1.00 26.46 N
ATOM 23 N3 G B 115 37.099 26.003 20.102 1.00 26.74 N
ATOM 24 C4 G B 115 35.978 25.491 19.530 1.00 26.68 C
ATOM 25 P G B 116 31.841 29.138 21.287 1.00 25.39 P
ATOM 26 OP1 G B 116 31.086 30.142 22.065 1.00 25.21 O
ATOM 27 OP2 G B 116 31.347 28.665 19.982 1.00 24.67 O
ATOM 28 O5' G B 116 33.333 29.690 21.042 1.00 26.13 O
TER
Atoms:
OP1: (31.086,30.142,22.065)
OP2: (31.347,28.665,19.982)
C3': (35.735,31.627,20.768)
C1': (36.973,29.788,20.006)
C5': (34.101,30.216,22.126)
O6: (36.242,28.283,14.222)
O4': (36.068,29.340,21.005)
C8: (35.353,28.698,18.380)
C2: (38.852,29.897,16.014)
C6: (36.834,28.767,15.194)
C5: (36.405,28.833,16.543)
C4: (37.230,29.416,17.484)
P: (31.841,29.138,21.287)
C4': (35.545,30.473,21.733)
C2': (37.085,31.298,20.149)
O2': (38.177,31.617,20.988)
N1: (38.097,29.334,15.012)
N2: (40.040,30.389,15.632)
N3: (38.459,29.968,17.286)
N7: (35.229,28.386,17.123)
N9: (36.540,29.327,18.679)
O5': (33.333,29.690,21.042)
O3': (35.729,32.876,21.442)
OP2: (31.347,28.665,19.982)
C3': (35.735,31.627,20.768)
C1': (36.973,29.788,20.006)
C5': (34.101,30.216,22.126)
O6: (36.242,28.283,14.222)
O4': (36.068,29.340,21.005)
C8: (35.353,28.698,18.380)
C2: (38.852,29.897,16.014)
C6: (36.834,28.767,15.194)
C5: (36.405,28.833,16.543)
C4: (37.230,29.416,17.484)
P: (31.841,29.138,21.287)
C4': (35.545,30.473,21.733)
C2': (37.085,31.298,20.149)
O2': (38.177,31.617,20.988)
N1: (38.097,29.334,15.012)
N2: (40.040,30.389,15.632)
N3: (38.459,29.968,17.286)
N7: (35.229,28.386,17.123)
N9: (36.540,29.327,18.679)
O5': (33.333,29.690,21.042)
O3': (35.729,32.876,21.442)
OP1: (28.654,23.871,20.545)
OP2: (30.001,23.827,18.379)
C3': (32.751,26.729,21.697)
C1': (34.579,25.272,21.631)
C5': (31.029,24.854,21.919)
O6: (36.762,25.286,16.029)
O4': (33.443,24.536,22.025)
C8: (33.960,24.675,19.215)
C2: (38.056,26.241,19.209)
C6: (36.784,25.475,17.256)
C5: (35.752,25.216,18.198)
C4: (35.978,25.491,19.530)
P: (29.944,23.697,19.846)
C4': (32.353,25.432,22.377)
C2': (34.251,26.723,21.976)
O2': (34.588,27.026,23.315)
N1: (37.932,26.000,17.857)
N2: (39.223,26.749,19.620)
N3: (37.099,26.003,20.102)
N7: (34.475,24.697,18.017)
N9: (34.820,25.132,20.193)
O5': (31.015,24.675,20.506)
O3': (32.057,27.862,22.225)
OP2: (30.001,23.827,18.379)
C3': (32.751,26.729,21.697)
C1': (34.579,25.272,21.631)
C5': (31.029,24.854,21.919)
O6: (36.762,25.286,16.029)
O4': (33.443,24.536,22.025)
C8: (33.960,24.675,19.215)
C2: (38.056,26.241,19.209)
C6: (36.784,25.475,17.256)
C5: (35.752,25.216,18.198)
C4: (35.978,25.491,19.530)
P: (29.944,23.697,19.846)
C4': (32.353,25.432,22.377)
C2': (34.251,26.723,21.976)
O2': (34.588,27.026,23.315)
N1: (37.932,26.000,17.857)
N2: (39.223,26.749,19.620)
N3: (37.099,26.003,20.102)
N7: (34.475,24.697,18.017)
N9: (34.820,25.132,20.193)
O5': (31.015,24.675,20.506)
O3': (32.057,27.862,22.225)
Image (generated by PyMOL):