ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A672:A671

Extra

PDB:
ATOM 1 O3' G A 671 211.700 112.120 -43.004 1.00 37.80 O
ATOM 2 P A A 672 212.387 111.674 -44.385 1.00 37.65 P
ATOM 3 OP1 A A 672 213.062 112.868 -44.973 1.00 37.51 O
ATOM 4 OP2 A A 672 211.379 110.938 -45.210 1.00 36.56 O
ATOM 5 O5' A A 672 213.518 110.704 -43.876 1.00 35.50 O
ATOM 6 C5' A A 672 214.600 111.214 -43.096 1.00 34.78 C
ATOM 7 C4' A A 672 215.546 110.105 -42.747 1.00 35.19 C
ATOM 8 O4' A A 672 214.981 109.300 -41.688 1.00 35.89 O
ATOM 9 C3' A A 672 215.821 109.126 -43.873 1.00 35.91 C
ATOM 10 O3' A A 672 216.819 109.612 -44.772 1.00 37.33 O
ATOM 11 C2' A A 672 216.234 107.872 -43.112 1.00 35.33 C
ATOM 12 O2' A A 672 217.584 107.913 -42.717 1.00 35.98 O
ATOM 13 C1' A A 672 215.333 107.942 -41.876 1.00 34.46 C
ATOM 14 N9 A A 672 214.104 107.163 -42.060 1.00 33.23 N
ATOM 15 C8 A A 672 212.925 107.550 -42.662 1.00 32.79 C
ATOM 16 N7 A A 672 212.036 106.588 -42.750 1.00 31.53 N
ATOM 17 C5 A A 672 212.661 105.503 -42.151 1.00 30.27 C
ATOM 18 C6 A A 672 212.254 104.174 -41.942 1.00 30.10 C
ATOM 19 N6 A A 672 211.081 103.685 -42.340 1.00 28.38 N
ATOM 20 N1 A A 672 213.113 103.347 -41.307 1.00 31.45 N
ATOM 21 C2 A A 672 214.302 103.828 -40.926 1.00 31.62 C
ATOM 22 N3 A A 672 214.803 105.052 -41.076 1.00 31.36 N
ATOM 23 C4 A A 672 213.924 105.849 -41.702 1.00 31.16 C
ATOM 24 P A A 673 217.106 108.824 -46.144 1.00 37.21 P
ATOM 25 OP1 A A 673 218.428 109.304 -46.638 1.00 38.70 O
ATOM 26 OP2 A A 673 215.925 108.953 -47.027 1.00 38.52 O
ATOM 27 O5' A A 673 217.263 107.324 -45.631 1.00 36.02 O
TER

ATOM 1 O3' U B 670 207.330 108.779 -44.315 1.00 41.87 O
ATOM 2 P G B 671 207.139 110.281 -43.758 1.00 43.72 P
ATOM 3 OP1 G B 671 205.919 110.262 -42.883 1.00 43.29 O
ATOM 4 OP2 G B 671 207.202 111.217 -44.922 1.00 41.80 O
ATOM 5 O5' G B 671 208.406 110.478 -42.783 1.00 41.25 O
ATOM 6 C5' G B 671 208.645 111.733 -42.121 1.00 39.53 C
ATOM 7 C4' G B 671 209.970 111.707 -41.386 1.00 38.17 C
ATOM 8 O4' G B 671 209.880 110.901 -40.187 1.00 37.95 O
ATOM 9 C3' G B 671 211.145 111.136 -42.151 1.00 37.69 C
ATOM 10 O3' G B 671 211.700 112.120 -43.004 1.00 37.80 O
ATOM 11 C2' G B 671 212.096 110.696 -41.038 1.00 37.11 C
ATOM 12 O2' G B 671 212.895 111.752 -40.548 1.00 36.83 O
ATOM 13 C1' G B 671 211.123 110.271 -39.936 1.00 36.72 C
ATOM 14 N9 G B 671 210.884 108.835 -39.837 1.00 36.45 N
ATOM 15 C8 G B 671 209.746 108.170 -40.229 1.00 36.14 C
ATOM 16 N7 G B 671 209.790 106.886 -39.987 1.00 36.87 N
ATOM 17 C5 G B 671 211.034 106.687 -39.401 1.00 36.47 C
ATOM 18 C6 G B 671 211.635 105.497 -38.918 1.00 36.79 C
ATOM 19 O6 G B 671 211.160 104.354 -38.880 1.00 39.30 O
ATOM 20 N1 G B 671 212.914 105.730 -38.435 1.00 35.12 N
ATOM 21 C2 G B 671 213.530 106.949 -38.403 1.00 36.24 C
ATOM 22 N2 G B 671 214.772 106.944 -37.905 1.00 37.67 N
ATOM 23 N3 G B 671 212.974 108.082 -38.830 1.00 34.91 N
ATOM 24 C4 G B 671 211.733 107.875 -39.315 1.00 35.91 C
ATOM 25 P A B 672 212.387 111.674 -44.385 1.00 37.65 P
ATOM 26 OP1 A B 672 213.062 112.868 -44.973 1.00 37.51 O
ATOM 27 OP2 A B 672 211.379 110.938 -45.210 1.00 36.56 O
ATOM 28 O5' A B 672 213.518 110.704 -43.876 1.00 35.50 O
TER

Atoms:
OP1: (213.062,112.868,-44.973)
OP2: (211.379,110.938,-45.210)
C3': (215.821,109.126,-43.873)
C1': (215.333,107.942,-41.876)
C5': (214.600,111.214,-43.096)
O4': (214.981,109.300,-41.688)
C8: (212.925,107.550,-42.662)
O2': (217.584,107.913,-42.717)
C6: (212.254,104.174,-41.942)
C5: (212.661,105.503,-42.151)
C4: (213.924,105.849,-41.702)
P: (212.387,111.674,-44.385)
C4': (215.546,110.105,-42.747)
C2': (216.234,107.872,-43.112)
C2: (214.302,103.828,-40.926)
N1: (213.113,103.347,-41.307)
N3: (214.803,105.052,-41.076)
N6: (211.081,103.685,-42.340)
N7: (212.036,106.588,-42.750)
N9: (214.104,107.163,-42.060)
O5': (213.518,110.704,-43.876)
O3': (216.819,109.612,-44.772)
OP1: (205.919,110.262,-42.883)
OP2: (207.202,111.217,-44.922)
C3': (211.145,111.136,-42.151)
C1': (211.123,110.271,-39.936)
C5': (208.645,111.733,-42.121)
O6: (211.160,104.354,-38.880)
O4': (209.880,110.901,-40.187)
C8: (209.746,108.170,-40.229)
C2: (213.530,106.949,-38.403)
C6: (211.635,105.497,-38.918)
C5: (211.034,106.687,-39.401)
C4: (211.733,107.875,-39.315)
P: (207.139,110.281,-43.758)
C4': (209.970,111.707,-41.386)
C2': (212.096,110.696,-41.038)
O2': (212.895,111.752,-40.548)
N1: (212.914,105.730,-38.435)
N2: (214.772,106.944,-37.905)
N3: (212.974,108.082,-38.830)
N7: (209.790,106.886,-39.987)
N9: (210.884,108.835,-39.837)
O5': (208.406,110.478,-42.783)
O3': (211.700,112.120,-43.004)
Image (generated by PyMOL):
PyMOL image
show in jmol