Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIL:A46:A45
Extra
PDB:
ATOM 1 O3' G A 45 -0.282 45.667 -4.464 1.00 17.73 O
ATOM 2 P A A 46 -1.676 46.464 -4.427 1.00 17.94 P
ATOM 3 OP1 A A 46 -1.810 47.175 -5.719 1.00 17.87 O
ATOM 4 OP2 A A 46 -1.759 47.238 -3.169 1.00 17.95 O
ATOM 5 O5' A A 46 -2.770 45.301 -4.344 1.00 18.16 O
ATOM 6 C5' A A 46 -3.003 44.429 -5.448 1.00 18.16 C
ATOM 7 C4' A A 46 -4.066 43.401 -5.110 1.00 18.47 C
ATOM 8 O4' A A 46 -3.654 42.590 -3.974 1.00 18.11 O
ATOM 9 C3' A A 46 -5.405 43.974 -4.672 1.00 18.97 C
ATOM 10 O3' A A 46 -6.175 44.405 -5.787 1.00 20.23 O
ATOM 11 C2' A A 46 -6.009 42.768 -3.964 1.00 18.41 C
ATOM 12 O2' A A 46 -6.473 41.778 -4.864 1.00 19.02 O
ATOM 13 C1' A A 46 -4.791 42.276 -3.184 1.00 17.64 C
ATOM 14 N9 A A 46 -4.664 42.903 -1.863 1.00 16.97 N
ATOM 15 C8 A A 46 -3.737 43.831 -1.474 1.00 16.82 C
ATOM 16 N7 A A 46 -3.863 44.225 -0.231 1.00 16.65 N
ATOM 17 C5 A A 46 -4.952 43.509 0.238 1.00 16.65 C
ATOM 18 C6 A A 46 -5.600 43.468 1.496 1.00 16.55 C
ATOM 19 N6 A A 46 -5.217 44.205 2.547 1.00 16.28 N
ATOM 20 N1 A A 46 -6.663 42.641 1.632 1.00 16.37 N
ATOM 21 C2 A A 46 -7.049 41.904 0.579 1.00 16.72 C
ATOM 22 N3 A A 46 -6.517 41.859 -0.646 1.00 16.68 N
ATOM 23 C4 A A 46 -5.460 42.688 -0.756 1.00 16.70 C
ATOM 24 P G A 47 -7.029 45.756 -5.697 1.00 21.46 P
ATOM 25 OP1 G A 47 -7.519 46.061 -7.060 1.00 21.29 O
ATOM 26 OP2 G A 47 -6.247 46.771 -4.957 1.00 21.50 O
ATOM 27 O5' G A 47 -8.270 45.338 -4.777 1.00 21.76 O
TER
ATOM 1 O3' G B 44 4.719 47.066 -1.151 1.00 22.23 O
ATOM 2 P G B 45 3.333 47.848 -1.346 1.00 22.47 P
ATOM 3 OP1 G B 45 3.527 48.878 -2.391 1.00 23.21 O
ATOM 4 OP2 G B 45 2.848 48.245 -0.003 1.00 23.33 O
ATOM 5 O5' G B 45 2.334 46.719 -1.894 1.00 21.44 O
ATOM 6 C5' G B 45 2.547 46.130 -3.172 1.00 19.83 C
ATOM 7 C4' G B 45 1.740 44.858 -3.367 1.00 18.64 C
ATOM 8 O4' G B 45 1.989 43.885 -2.316 1.00 18.08 O
ATOM 9 C3' G B 45 0.225 44.988 -3.325 1.00 18.12 C
ATOM 10 O3' G B 45 -0.282 45.667 -4.464 1.00 17.73 O
ATOM 11 C2' G B 45 -0.111 43.502 -3.308 1.00 17.67 C
ATOM 12 O2' G B 45 0.156 42.845 -4.538 1.00 18.03 O
ATOM 13 C1' G B 45 0.848 43.044 -2.209 1.00 16.95 C
ATOM 14 N9 G B 45 0.238 43.176 -0.882 1.00 16.04 N
ATOM 15 C8 G B 45 0.548 44.100 0.091 1.00 15.37 C
ATOM 16 N7 G B 45 -0.180 43.987 1.168 1.00 15.43 N
ATOM 17 C5 G B 45 -1.036 42.928 0.895 1.00 15.04 C
ATOM 18 C6 G B 45 -2.050 42.337 1.694 1.00 14.82 C
ATOM 19 O6 G B 45 -2.403 42.655 2.836 1.00 14.50 O
ATOM 20 N1 G B 45 -2.690 41.278 1.045 1.00 14.99 N
ATOM 21 C2 G B 45 -2.380 40.840 -0.225 1.00 15.04 C
ATOM 22 N2 G B 45 -3.096 39.809 -0.696 1.00 14.64 N
ATOM 23 N3 G B 45 -1.430 41.382 -0.979 1.00 15.09 N
ATOM 24 C4 G B 45 -0.794 42.417 -0.364 1.00 15.61 C
ATOM 25 P A B 46 -1.676 46.464 -4.427 1.00 17.94 P
ATOM 26 OP1 A B 46 -1.810 47.175 -5.719 1.00 17.87 O
ATOM 27 OP2 A B 46 -1.759 47.238 -3.169 1.00 17.95 O
ATOM 28 O5' A B 46 -2.770 45.301 -4.344 1.00 18.16 O
TER
ATOM 2 P A A 46 -1.676 46.464 -4.427 1.00 17.94 P
ATOM 3 OP1 A A 46 -1.810 47.175 -5.719 1.00 17.87 O
ATOM 4 OP2 A A 46 -1.759 47.238 -3.169 1.00 17.95 O
ATOM 5 O5' A A 46 -2.770 45.301 -4.344 1.00 18.16 O
ATOM 6 C5' A A 46 -3.003 44.429 -5.448 1.00 18.16 C
ATOM 7 C4' A A 46 -4.066 43.401 -5.110 1.00 18.47 C
ATOM 8 O4' A A 46 -3.654 42.590 -3.974 1.00 18.11 O
ATOM 9 C3' A A 46 -5.405 43.974 -4.672 1.00 18.97 C
ATOM 10 O3' A A 46 -6.175 44.405 -5.787 1.00 20.23 O
ATOM 11 C2' A A 46 -6.009 42.768 -3.964 1.00 18.41 C
ATOM 12 O2' A A 46 -6.473 41.778 -4.864 1.00 19.02 O
ATOM 13 C1' A A 46 -4.791 42.276 -3.184 1.00 17.64 C
ATOM 14 N9 A A 46 -4.664 42.903 -1.863 1.00 16.97 N
ATOM 15 C8 A A 46 -3.737 43.831 -1.474 1.00 16.82 C
ATOM 16 N7 A A 46 -3.863 44.225 -0.231 1.00 16.65 N
ATOM 17 C5 A A 46 -4.952 43.509 0.238 1.00 16.65 C
ATOM 18 C6 A A 46 -5.600 43.468 1.496 1.00 16.55 C
ATOM 19 N6 A A 46 -5.217 44.205 2.547 1.00 16.28 N
ATOM 20 N1 A A 46 -6.663 42.641 1.632 1.00 16.37 N
ATOM 21 C2 A A 46 -7.049 41.904 0.579 1.00 16.72 C
ATOM 22 N3 A A 46 -6.517 41.859 -0.646 1.00 16.68 N
ATOM 23 C4 A A 46 -5.460 42.688 -0.756 1.00 16.70 C
ATOM 24 P G A 47 -7.029 45.756 -5.697 1.00 21.46 P
ATOM 25 OP1 G A 47 -7.519 46.061 -7.060 1.00 21.29 O
ATOM 26 OP2 G A 47 -6.247 46.771 -4.957 1.00 21.50 O
ATOM 27 O5' G A 47 -8.270 45.338 -4.777 1.00 21.76 O
TER
ATOM 1 O3' G B 44 4.719 47.066 -1.151 1.00 22.23 O
ATOM 2 P G B 45 3.333 47.848 -1.346 1.00 22.47 P
ATOM 3 OP1 G B 45 3.527 48.878 -2.391 1.00 23.21 O
ATOM 4 OP2 G B 45 2.848 48.245 -0.003 1.00 23.33 O
ATOM 5 O5' G B 45 2.334 46.719 -1.894 1.00 21.44 O
ATOM 6 C5' G B 45 2.547 46.130 -3.172 1.00 19.83 C
ATOM 7 C4' G B 45 1.740 44.858 -3.367 1.00 18.64 C
ATOM 8 O4' G B 45 1.989 43.885 -2.316 1.00 18.08 O
ATOM 9 C3' G B 45 0.225 44.988 -3.325 1.00 18.12 C
ATOM 10 O3' G B 45 -0.282 45.667 -4.464 1.00 17.73 O
ATOM 11 C2' G B 45 -0.111 43.502 -3.308 1.00 17.67 C
ATOM 12 O2' G B 45 0.156 42.845 -4.538 1.00 18.03 O
ATOM 13 C1' G B 45 0.848 43.044 -2.209 1.00 16.95 C
ATOM 14 N9 G B 45 0.238 43.176 -0.882 1.00 16.04 N
ATOM 15 C8 G B 45 0.548 44.100 0.091 1.00 15.37 C
ATOM 16 N7 G B 45 -0.180 43.987 1.168 1.00 15.43 N
ATOM 17 C5 G B 45 -1.036 42.928 0.895 1.00 15.04 C
ATOM 18 C6 G B 45 -2.050 42.337 1.694 1.00 14.82 C
ATOM 19 O6 G B 45 -2.403 42.655 2.836 1.00 14.50 O
ATOM 20 N1 G B 45 -2.690 41.278 1.045 1.00 14.99 N
ATOM 21 C2 G B 45 -2.380 40.840 -0.225 1.00 15.04 C
ATOM 22 N2 G B 45 -3.096 39.809 -0.696 1.00 14.64 N
ATOM 23 N3 G B 45 -1.430 41.382 -0.979 1.00 15.09 N
ATOM 24 C4 G B 45 -0.794 42.417 -0.364 1.00 15.61 C
ATOM 25 P A B 46 -1.676 46.464 -4.427 1.00 17.94 P
ATOM 26 OP1 A B 46 -1.810 47.175 -5.719 1.00 17.87 O
ATOM 27 OP2 A B 46 -1.759 47.238 -3.169 1.00 17.95 O
ATOM 28 O5' A B 46 -2.770 45.301 -4.344 1.00 18.16 O
TER
Atoms:
OP1: (-1.810,47.175,-5.719)
OP2: (-1.759,47.238,-3.169)
C3': (-5.405,43.974,-4.672)
C1': (-4.791,42.276,-3.184)
C5': (-3.003,44.429,-5.448)
O4': (-3.654,42.590,-3.974)
C8: (-3.737,43.831,-1.474)
O2': (-6.473,41.778,-4.864)
C6: (-5.600,43.468,1.496)
C5: (-4.952,43.509,0.238)
C4: (-5.460,42.688,-0.756)
P: (-1.676,46.464,-4.427)
C4': (-4.066,43.401,-5.110)
C2': (-6.009,42.768,-3.964)
C2: (-7.049,41.904,0.579)
N1: (-6.663,42.641,1.632)
N3: (-6.517,41.859,-0.646)
N6: (-5.217,44.205,2.547)
N7: (-3.863,44.225,-0.231)
N9: (-4.664,42.903,-1.863)
O5': (-2.770,45.301,-4.344)
O3': (-6.175,44.405,-5.787)
OP2: (-1.759,47.238,-3.169)
C3': (-5.405,43.974,-4.672)
C1': (-4.791,42.276,-3.184)
C5': (-3.003,44.429,-5.448)
O4': (-3.654,42.590,-3.974)
C8: (-3.737,43.831,-1.474)
O2': (-6.473,41.778,-4.864)
C6: (-5.600,43.468,1.496)
C5: (-4.952,43.509,0.238)
C4: (-5.460,42.688,-0.756)
P: (-1.676,46.464,-4.427)
C4': (-4.066,43.401,-5.110)
C2': (-6.009,42.768,-3.964)
C2: (-7.049,41.904,0.579)
N1: (-6.663,42.641,1.632)
N3: (-6.517,41.859,-0.646)
N6: (-5.217,44.205,2.547)
N7: (-3.863,44.225,-0.231)
N9: (-4.664,42.903,-1.863)
O5': (-2.770,45.301,-4.344)
O3': (-6.175,44.405,-5.787)
OP1: (3.527,48.878,-2.391)
OP2: (2.848,48.245,-0.003)
C3': (0.225,44.988,-3.325)
C1': (0.848,43.044,-2.209)
C5': (2.547,46.130,-3.172)
O6: (-2.403,42.655,2.836)
O4': (1.989,43.885,-2.316)
C8: (0.548,44.100,0.091)
C2: (-2.380,40.840,-0.225)
C6: (-2.050,42.337,1.694)
C5: (-1.036,42.928,0.895)
C4: (-0.794,42.417,-0.364)
P: (3.333,47.848,-1.346)
C4': (1.740,44.858,-3.367)
C2': (-0.111,43.502,-3.308)
O2': (0.156,42.845,-4.538)
N1: (-2.690,41.278,1.045)
N2: (-3.096,39.809,-0.696)
N3: (-1.430,41.382,-0.979)
N7: (-0.180,43.987,1.168)
N9: (0.238,43.176,-0.882)
O5': (2.334,46.719,-1.894)
O3': (-0.282,45.667,-4.464)
OP2: (2.848,48.245,-0.003)
C3': (0.225,44.988,-3.325)
C1': (0.848,43.044,-2.209)
C5': (2.547,46.130,-3.172)
O6: (-2.403,42.655,2.836)
O4': (1.989,43.885,-2.316)
C8: (0.548,44.100,0.091)
C2: (-2.380,40.840,-0.225)
C6: (-2.050,42.337,1.694)
C5: (-1.036,42.928,0.895)
C4: (-0.794,42.417,-0.364)
P: (3.333,47.848,-1.346)
C4': (1.740,44.858,-3.367)
C2': (-0.111,43.502,-3.308)
O2': (0.156,42.845,-4.538)
N1: (-2.690,41.278,1.045)
N2: (-3.096,39.809,-0.696)
N3: (-1.430,41.382,-0.979)
N7: (-0.180,43.987,1.168)
N9: (0.238,43.176,-0.882)
O5': (2.334,46.719,-1.894)
O3': (-0.282,45.667,-4.464)
Image (generated by PyMOL):