Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DVI:B28:B27
Extra
PDB:
ATOM 1 O3' G A 27 10.091 0.747 -35.191 1.00 68.75 O
ATOM 2 P G A 28 10.599 -0.748 -35.470 1.00 68.88 P
ATOM 3 OP1 G A 28 11.711 -0.689 -36.455 1.00 69.30 O
ATOM 4 OP2 G A 28 9.414 -1.611 -35.742 1.00 66.96 O
ATOM 5 O5' G A 28 11.189 -1.161 -34.055 1.00 64.70 O
ATOM 6 C5' G A 28 11.340 -2.513 -33.701 1.00 59.55 C
ATOM 7 C4' G A 28 11.517 -2.627 -32.215 1.00 56.76 C
ATOM 8 O4' G A 28 10.342 -2.103 -31.540 1.00 56.29 O
ATOM 9 C3' G A 28 11.635 -4.060 -31.748 1.00 55.31 C
ATOM 10 O3' G A 28 12.989 -4.477 -31.860 1.00 52.56 O
ATOM 11 C2' G A 28 11.100 -3.984 -30.324 1.00 54.12 C
ATOM 12 O2' G A 28 12.040 -3.475 -29.402 1.00 54.31 O
ATOM 13 C1' G A 28 9.952 -2.986 -30.500 1.00 53.26 C
ATOM 14 N9 G A 28 8.696 -3.611 -30.907 1.00 49.85 N
ATOM 15 C8 G A 28 8.038 -3.424 -32.101 1.00 48.66 C
ATOM 16 N7 G A 28 6.929 -4.107 -32.189 1.00 46.97 N
ATOM 17 C5 G A 28 6.850 -4.788 -30.981 1.00 46.31 C
ATOM 18 C6 G A 28 5.865 -5.682 -30.497 1.00 43.76 C
ATOM 19 O6 G A 28 4.838 -6.060 -31.053 1.00 42.43 O
ATOM 20 N1 G A 28 6.171 -6.143 -29.222 1.00 43.62 N
ATOM 21 C2 G A 28 7.281 -5.786 -28.502 1.00 44.31 C
ATOM 22 N2 G A 28 7.391 -6.324 -27.278 1.00 41.86 N
ATOM 23 N3 G A 28 8.213 -4.956 -28.944 1.00 46.01 N
ATOM 24 C4 G A 28 7.934 -4.496 -30.180 1.00 46.72 C
ATOM 25 P C A 29 13.323 -5.878 -32.566 1.00 54.02 P
ATOM 26 OP1 C A 29 14.799 -6.010 -32.695 1.00 52.54 O
ATOM 27 OP2 C A 29 12.462 -5.997 -33.776 1.00 49.77 O
ATOM 28 O5' C A 29 12.816 -6.938 -31.492 1.00 49.72 O
TER
ATOM 1 O3' G B 26 5.195 3.303 -37.255 1.00 75.83 O
ATOM 2 P G B 27 5.891 1.880 -37.548 1.00 76.68 P
ATOM 3 OP1 G B 27 6.750 2.029 -38.753 1.00 75.60 O
ATOM 4 OP2 G B 27 4.841 0.828 -37.522 1.00 75.65 O
ATOM 5 O5' G B 27 6.830 1.673 -36.277 1.00 73.82 O
ATOM 6 C5' G B 27 7.709 2.715 -35.863 1.00 70.78 C
ATOM 7 C4' G B 27 8.381 2.360 -34.559 1.00 69.76 C
ATOM 8 O4' G B 27 7.451 2.448 -33.442 1.00 68.51 O
ATOM 9 C3' G B 27 8.899 0.943 -34.451 1.00 69.08 C
ATOM 10 O3' G B 27 10.091 0.747 -35.191 1.00 68.75 O
ATOM 11 C2' G B 27 9.093 0.820 -32.947 1.00 68.02 C
ATOM 12 O2' G B 27 10.223 1.538 -32.485 1.00 67.24 O
ATOM 13 C1' G B 27 7.819 1.500 -32.444 1.00 65.58 C
ATOM 14 N9 G B 27 6.729 0.541 -32.294 1.00 61.92 N
ATOM 15 C8 G B 27 5.751 0.245 -33.215 1.00 60.03 C
ATOM 16 N7 G B 27 4.913 -0.666 -32.800 1.00 58.09 N
ATOM 17 C5 G B 27 5.362 -0.991 -31.525 1.00 57.94 C
ATOM 18 C6 G B 27 4.850 -1.918 -30.578 1.00 56.52 C
ATOM 19 O6 G B 27 3.860 -2.654 -30.678 1.00 55.08 O
ATOM 20 N1 G B 27 5.614 -1.935 -29.413 1.00 54.89 N
ATOM 21 C2 G B 27 6.724 -1.158 -29.185 1.00 56.73 C
ATOM 22 N2 G B 27 7.327 -1.320 -27.996 1.00 54.67 N
ATOM 23 N3 G B 27 7.209 -0.286 -30.058 1.00 57.75 N
ATOM 24 C4 G B 27 6.483 -0.255 -31.198 1.00 59.41 C
ATOM 25 P G B 28 10.599 -0.748 -35.470 1.00 68.88 P
ATOM 26 OP1 G B 28 11.711 -0.689 -36.455 1.00 69.30 O
ATOM 27 OP2 G B 28 9.414 -1.611 -35.742 1.00 66.96 O
ATOM 28 O5' G B 28 11.189 -1.161 -34.055 1.00 64.70 O
TER
ATOM 2 P G A 28 10.599 -0.748 -35.470 1.00 68.88 P
ATOM 3 OP1 G A 28 11.711 -0.689 -36.455 1.00 69.30 O
ATOM 4 OP2 G A 28 9.414 -1.611 -35.742 1.00 66.96 O
ATOM 5 O5' G A 28 11.189 -1.161 -34.055 1.00 64.70 O
ATOM 6 C5' G A 28 11.340 -2.513 -33.701 1.00 59.55 C
ATOM 7 C4' G A 28 11.517 -2.627 -32.215 1.00 56.76 C
ATOM 8 O4' G A 28 10.342 -2.103 -31.540 1.00 56.29 O
ATOM 9 C3' G A 28 11.635 -4.060 -31.748 1.00 55.31 C
ATOM 10 O3' G A 28 12.989 -4.477 -31.860 1.00 52.56 O
ATOM 11 C2' G A 28 11.100 -3.984 -30.324 1.00 54.12 C
ATOM 12 O2' G A 28 12.040 -3.475 -29.402 1.00 54.31 O
ATOM 13 C1' G A 28 9.952 -2.986 -30.500 1.00 53.26 C
ATOM 14 N9 G A 28 8.696 -3.611 -30.907 1.00 49.85 N
ATOM 15 C8 G A 28 8.038 -3.424 -32.101 1.00 48.66 C
ATOM 16 N7 G A 28 6.929 -4.107 -32.189 1.00 46.97 N
ATOM 17 C5 G A 28 6.850 -4.788 -30.981 1.00 46.31 C
ATOM 18 C6 G A 28 5.865 -5.682 -30.497 1.00 43.76 C
ATOM 19 O6 G A 28 4.838 -6.060 -31.053 1.00 42.43 O
ATOM 20 N1 G A 28 6.171 -6.143 -29.222 1.00 43.62 N
ATOM 21 C2 G A 28 7.281 -5.786 -28.502 1.00 44.31 C
ATOM 22 N2 G A 28 7.391 -6.324 -27.278 1.00 41.86 N
ATOM 23 N3 G A 28 8.213 -4.956 -28.944 1.00 46.01 N
ATOM 24 C4 G A 28 7.934 -4.496 -30.180 1.00 46.72 C
ATOM 25 P C A 29 13.323 -5.878 -32.566 1.00 54.02 P
ATOM 26 OP1 C A 29 14.799 -6.010 -32.695 1.00 52.54 O
ATOM 27 OP2 C A 29 12.462 -5.997 -33.776 1.00 49.77 O
ATOM 28 O5' C A 29 12.816 -6.938 -31.492 1.00 49.72 O
TER
ATOM 1 O3' G B 26 5.195 3.303 -37.255 1.00 75.83 O
ATOM 2 P G B 27 5.891 1.880 -37.548 1.00 76.68 P
ATOM 3 OP1 G B 27 6.750 2.029 -38.753 1.00 75.60 O
ATOM 4 OP2 G B 27 4.841 0.828 -37.522 1.00 75.65 O
ATOM 5 O5' G B 27 6.830 1.673 -36.277 1.00 73.82 O
ATOM 6 C5' G B 27 7.709 2.715 -35.863 1.00 70.78 C
ATOM 7 C4' G B 27 8.381 2.360 -34.559 1.00 69.76 C
ATOM 8 O4' G B 27 7.451 2.448 -33.442 1.00 68.51 O
ATOM 9 C3' G B 27 8.899 0.943 -34.451 1.00 69.08 C
ATOM 10 O3' G B 27 10.091 0.747 -35.191 1.00 68.75 O
ATOM 11 C2' G B 27 9.093 0.820 -32.947 1.00 68.02 C
ATOM 12 O2' G B 27 10.223 1.538 -32.485 1.00 67.24 O
ATOM 13 C1' G B 27 7.819 1.500 -32.444 1.00 65.58 C
ATOM 14 N9 G B 27 6.729 0.541 -32.294 1.00 61.92 N
ATOM 15 C8 G B 27 5.751 0.245 -33.215 1.00 60.03 C
ATOM 16 N7 G B 27 4.913 -0.666 -32.800 1.00 58.09 N
ATOM 17 C5 G B 27 5.362 -0.991 -31.525 1.00 57.94 C
ATOM 18 C6 G B 27 4.850 -1.918 -30.578 1.00 56.52 C
ATOM 19 O6 G B 27 3.860 -2.654 -30.678 1.00 55.08 O
ATOM 20 N1 G B 27 5.614 -1.935 -29.413 1.00 54.89 N
ATOM 21 C2 G B 27 6.724 -1.158 -29.185 1.00 56.73 C
ATOM 22 N2 G B 27 7.327 -1.320 -27.996 1.00 54.67 N
ATOM 23 N3 G B 27 7.209 -0.286 -30.058 1.00 57.75 N
ATOM 24 C4 G B 27 6.483 -0.255 -31.198 1.00 59.41 C
ATOM 25 P G B 28 10.599 -0.748 -35.470 1.00 68.88 P
ATOM 26 OP1 G B 28 11.711 -0.689 -36.455 1.00 69.30 O
ATOM 27 OP2 G B 28 9.414 -1.611 -35.742 1.00 66.96 O
ATOM 28 O5' G B 28 11.189 -1.161 -34.055 1.00 64.70 O
TER
Atoms:
OP1: (11.711,-0.689,-36.455)
OP2: (9.414,-1.611,-35.742)
C3': (11.635,-4.060,-31.748)
C1': (9.952,-2.986,-30.500)
C5': (11.340,-2.513,-33.701)
O6: (4.838,-6.060,-31.053)
O4': (10.342,-2.103,-31.540)
C8: (8.038,-3.424,-32.101)
C2: (7.281,-5.786,-28.502)
C6: (5.865,-5.682,-30.497)
C5: (6.850,-4.788,-30.981)
C4: (7.934,-4.496,-30.180)
P: (10.599,-0.748,-35.470)
C4': (11.517,-2.627,-32.215)
C2': (11.100,-3.984,-30.324)
O2': (12.040,-3.475,-29.402)
N1: (6.171,-6.143,-29.222)
N2: (7.391,-6.324,-27.278)
N3: (8.213,-4.956,-28.944)
N7: (6.929,-4.107,-32.189)
N9: (8.696,-3.611,-30.907)
O5': (11.189,-1.161,-34.055)
O3': (12.989,-4.477,-31.860)
OP2: (9.414,-1.611,-35.742)
C3': (11.635,-4.060,-31.748)
C1': (9.952,-2.986,-30.500)
C5': (11.340,-2.513,-33.701)
O6: (4.838,-6.060,-31.053)
O4': (10.342,-2.103,-31.540)
C8: (8.038,-3.424,-32.101)
C2: (7.281,-5.786,-28.502)
C6: (5.865,-5.682,-30.497)
C5: (6.850,-4.788,-30.981)
C4: (7.934,-4.496,-30.180)
P: (10.599,-0.748,-35.470)
C4': (11.517,-2.627,-32.215)
C2': (11.100,-3.984,-30.324)
O2': (12.040,-3.475,-29.402)
N1: (6.171,-6.143,-29.222)
N2: (7.391,-6.324,-27.278)
N3: (8.213,-4.956,-28.944)
N7: (6.929,-4.107,-32.189)
N9: (8.696,-3.611,-30.907)
O5': (11.189,-1.161,-34.055)
O3': (12.989,-4.477,-31.860)
OP1: (6.750,2.029,-38.753)
OP2: (4.841,0.828,-37.522)
C3': (8.899,0.943,-34.451)
C1': (7.819,1.500,-32.444)
C5': (7.709,2.715,-35.863)
O6: (3.860,-2.654,-30.678)
O4': (7.451,2.448,-33.442)
C8: (5.751,0.245,-33.215)
C2: (6.724,-1.158,-29.185)
C6: (4.850,-1.918,-30.578)
C5: (5.362,-0.991,-31.525)
C4: (6.483,-0.255,-31.198)
P: (5.891,1.880,-37.548)
C4': (8.381,2.360,-34.559)
C2': (9.093,0.820,-32.947)
O2': (10.223,1.538,-32.485)
N1: (5.614,-1.935,-29.413)
N2: (7.327,-1.320,-27.996)
N3: (7.209,-0.286,-30.058)
N7: (4.913,-0.666,-32.800)
N9: (6.729,0.541,-32.294)
O5': (6.830,1.673,-36.277)
O3': (10.091,0.747,-35.191)
OP2: (4.841,0.828,-37.522)
C3': (8.899,0.943,-34.451)
C1': (7.819,1.500,-32.444)
C5': (7.709,2.715,-35.863)
O6: (3.860,-2.654,-30.678)
O4': (7.451,2.448,-33.442)
C8: (5.751,0.245,-33.215)
C2: (6.724,-1.158,-29.185)
C6: (4.850,-1.918,-30.578)
C5: (5.362,-0.991,-31.525)
C4: (6.483,-0.255,-31.198)
P: (5.891,1.880,-37.548)
C4': (8.381,2.360,-34.559)
C2': (9.093,0.820,-32.947)
O2': (10.223,1.538,-32.485)
N1: (5.614,-1.935,-29.413)
N2: (7.327,-1.320,-27.996)
N3: (7.209,-0.286,-30.058)
N7: (4.913,-0.666,-32.800)
N9: (6.729,0.541,-32.294)
O5': (6.830,1.673,-36.277)
O3': (10.091,0.747,-35.191)
Image (generated by PyMOL):