Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:A8:A7
Extra
PDB:
ATOM 1 O3' G A 7 30.959 -21.605 9.529 1.00 25.47 O
ATOM 2 P U A 8 29.546 -20.849 9.471 1.00 26.65 P
ATOM 3 OP1 U A 8 28.488 -21.885 9.554 1.00 28.43 O
ATOM 4 OP2 U A 8 29.572 -19.917 8.322 1.00 26.08 O
ATOM 5 O5' U A 8 29.519 -20.007 10.820 1.00 21.88 O
ATOM 6 C5' U A 8 29.297 -20.667 12.053 1.00 21.61 C
ATOM 7 C4' U A 8 29.104 -19.666 13.148 1.00 22.08 C
ATOM 8 O4' U A 8 30.340 -18.949 13.353 1.00 22.03 O
ATOM 9 C3' U A 8 28.083 -18.574 12.875 1.00 22.92 C
ATOM 10 O3' U A 8 26.753 -19.039 13.108 1.00 25.35 O
ATOM 11 C2' U A 8 28.522 -17.480 13.843 1.00 23.23 C
ATOM 12 O2' U A 8 28.072 -17.645 15.174 1.00 23.36 O
ATOM 13 C1' U A 8 30.048 -17.636 13.802 1.00 22.06 C
ATOM 14 N1 U A 8 30.663 -16.679 12.877 1.00 19.61 N
ATOM 15 C2 U A 8 31.086 -15.470 13.406 1.00 20.24 C
ATOM 16 O2 U A 8 31.054 -15.216 14.604 1.00 19.96 O
ATOM 17 N3 U A 8 31.551 -14.569 12.485 1.00 21.43 N
ATOM 18 C4 U A 8 31.649 -14.752 11.123 1.00 22.41 C
ATOM 19 O4 U A 8 31.952 -13.796 10.414 1.00 23.52 O
ATOM 20 C5 U A 8 31.249 -16.053 10.660 1.00 21.75 C
ATOM 21 C6 U A 8 30.782 -16.952 11.535 1.00 19.88 C
ATOM 22 P G A 9 25.537 -18.479 12.214 1.00 28.33 P
ATOM 23 OP1 G A 9 24.311 -19.211 12.615 1.00 27.98 O
ATOM 24 OP2 G A 9 25.945 -18.477 10.783 1.00 28.77 O
ATOM 25 O5' G A 9 25.403 -16.969 12.706 1.00 28.29 O
TER
ATOM 1 O3' G B 6 35.149 -21.179 5.218 1.00 31.44 O
ATOM 2 P G B 7 33.619 -20.702 5.329 1.00 30.47 P
ATOM 3 OP1 G B 7 32.774 -21.730 4.682 1.00 28.48 O
ATOM 4 OP2 G B 7 33.548 -19.297 4.864 1.00 29.16 O
ATOM 5 O5' G B 7 33.347 -20.728 6.897 1.00 28.01 O
ATOM 6 C5' G B 7 33.474 -21.945 7.617 1.00 26.85 C
ATOM 7 C4' G B 7 33.339 -21.699 9.098 1.00 25.79 C
ATOM 8 O4' G B 7 34.489 -20.979 9.609 1.00 26.67 O
ATOM 9 C3' G B 7 32.156 -20.846 9.514 1.00 25.21 C
ATOM 10 O3' G B 7 30.959 -21.605 9.529 1.00 25.47 O
ATOM 11 C2' G B 7 32.584 -20.365 10.889 1.00 23.81 C
ATOM 12 O2' G B 7 32.443 -21.382 11.853 1.00 23.88 O
ATOM 13 C1' G B 7 34.077 -20.117 10.658 1.00 24.08 C
ATOM 14 N9 G B 7 34.357 -18.753 10.235 1.00 23.97 N
ATOM 15 C8 G B 7 34.561 -18.320 8.948 1.00 24.92 C
ATOM 16 N7 G B 7 34.795 -17.038 8.871 1.00 27.21 N
ATOM 17 C5 G B 7 34.740 -16.599 10.188 1.00 24.00 C
ATOM 18 C6 G B 7 34.920 -15.301 10.731 1.00 23.77 C
ATOM 19 O6 G B 7 35.180 -14.245 10.138 1.00 27.04 O
ATOM 20 N1 G B 7 34.773 -15.302 12.111 1.00 22.26 N
ATOM 21 C2 G B 7 34.493 -16.409 12.875 1.00 23.24 C
ATOM 22 N2 G B 7 34.377 -16.201 14.195 1.00 24.14 N
ATOM 23 N3 G B 7 34.334 -17.626 12.382 1.00 22.53 N
ATOM 24 C4 G B 7 34.469 -17.646 11.041 1.00 23.31 C
ATOM 25 P U B 8 29.546 -20.849 9.471 1.00 26.65 P
ATOM 26 OP1 U B 8 28.488 -21.885 9.554 1.00 28.43 O
ATOM 27 OP2 U B 8 29.572 -19.917 8.322 1.00 26.08 O
ATOM 28 O5' U B 8 29.519 -20.007 10.820 1.00 21.88 O
TER
ATOM 2 P U A 8 29.546 -20.849 9.471 1.00 26.65 P
ATOM 3 OP1 U A 8 28.488 -21.885 9.554 1.00 28.43 O
ATOM 4 OP2 U A 8 29.572 -19.917 8.322 1.00 26.08 O
ATOM 5 O5' U A 8 29.519 -20.007 10.820 1.00 21.88 O
ATOM 6 C5' U A 8 29.297 -20.667 12.053 1.00 21.61 C
ATOM 7 C4' U A 8 29.104 -19.666 13.148 1.00 22.08 C
ATOM 8 O4' U A 8 30.340 -18.949 13.353 1.00 22.03 O
ATOM 9 C3' U A 8 28.083 -18.574 12.875 1.00 22.92 C
ATOM 10 O3' U A 8 26.753 -19.039 13.108 1.00 25.35 O
ATOM 11 C2' U A 8 28.522 -17.480 13.843 1.00 23.23 C
ATOM 12 O2' U A 8 28.072 -17.645 15.174 1.00 23.36 O
ATOM 13 C1' U A 8 30.048 -17.636 13.802 1.00 22.06 C
ATOM 14 N1 U A 8 30.663 -16.679 12.877 1.00 19.61 N
ATOM 15 C2 U A 8 31.086 -15.470 13.406 1.00 20.24 C
ATOM 16 O2 U A 8 31.054 -15.216 14.604 1.00 19.96 O
ATOM 17 N3 U A 8 31.551 -14.569 12.485 1.00 21.43 N
ATOM 18 C4 U A 8 31.649 -14.752 11.123 1.00 22.41 C
ATOM 19 O4 U A 8 31.952 -13.796 10.414 1.00 23.52 O
ATOM 20 C5 U A 8 31.249 -16.053 10.660 1.00 21.75 C
ATOM 21 C6 U A 8 30.782 -16.952 11.535 1.00 19.88 C
ATOM 22 P G A 9 25.537 -18.479 12.214 1.00 28.33 P
ATOM 23 OP1 G A 9 24.311 -19.211 12.615 1.00 27.98 O
ATOM 24 OP2 G A 9 25.945 -18.477 10.783 1.00 28.77 O
ATOM 25 O5' G A 9 25.403 -16.969 12.706 1.00 28.29 O
TER
ATOM 1 O3' G B 6 35.149 -21.179 5.218 1.00 31.44 O
ATOM 2 P G B 7 33.619 -20.702 5.329 1.00 30.47 P
ATOM 3 OP1 G B 7 32.774 -21.730 4.682 1.00 28.48 O
ATOM 4 OP2 G B 7 33.548 -19.297 4.864 1.00 29.16 O
ATOM 5 O5' G B 7 33.347 -20.728 6.897 1.00 28.01 O
ATOM 6 C5' G B 7 33.474 -21.945 7.617 1.00 26.85 C
ATOM 7 C4' G B 7 33.339 -21.699 9.098 1.00 25.79 C
ATOM 8 O4' G B 7 34.489 -20.979 9.609 1.00 26.67 O
ATOM 9 C3' G B 7 32.156 -20.846 9.514 1.00 25.21 C
ATOM 10 O3' G B 7 30.959 -21.605 9.529 1.00 25.47 O
ATOM 11 C2' G B 7 32.584 -20.365 10.889 1.00 23.81 C
ATOM 12 O2' G B 7 32.443 -21.382 11.853 1.00 23.88 O
ATOM 13 C1' G B 7 34.077 -20.117 10.658 1.00 24.08 C
ATOM 14 N9 G B 7 34.357 -18.753 10.235 1.00 23.97 N
ATOM 15 C8 G B 7 34.561 -18.320 8.948 1.00 24.92 C
ATOM 16 N7 G B 7 34.795 -17.038 8.871 1.00 27.21 N
ATOM 17 C5 G B 7 34.740 -16.599 10.188 1.00 24.00 C
ATOM 18 C6 G B 7 34.920 -15.301 10.731 1.00 23.77 C
ATOM 19 O6 G B 7 35.180 -14.245 10.138 1.00 27.04 O
ATOM 20 N1 G B 7 34.773 -15.302 12.111 1.00 22.26 N
ATOM 21 C2 G B 7 34.493 -16.409 12.875 1.00 23.24 C
ATOM 22 N2 G B 7 34.377 -16.201 14.195 1.00 24.14 N
ATOM 23 N3 G B 7 34.334 -17.626 12.382 1.00 22.53 N
ATOM 24 C4 G B 7 34.469 -17.646 11.041 1.00 23.31 C
ATOM 25 P U B 8 29.546 -20.849 9.471 1.00 26.65 P
ATOM 26 OP1 U B 8 28.488 -21.885 9.554 1.00 28.43 O
ATOM 27 OP2 U B 8 29.572 -19.917 8.322 1.00 26.08 O
ATOM 28 O5' U B 8 29.519 -20.007 10.820 1.00 21.88 O
TER
Atoms:
C4: (31.649,-14.752,11.123)
N3: (31.551,-14.569,12.485)
OP1: (28.488,-21.885,9.554)
OP2: (29.572,-19.917,8.322)
C2: (31.086,-15.470,13.406)
C1': (30.048,-17.636,13.802)
C3': (28.083,-18.574,12.875)
O5': (29.519,-20.007,10.820)
O4': (30.340,-18.949,13.353)
C5': (29.297,-20.667,12.053)
P: (29.546,-20.849,9.471)
C4': (29.104,-19.666,13.148)
C2': (28.522,-17.480,13.843)
O2': (28.072,-17.645,15.174)
N1: (30.663,-16.679,12.877)
O4: (31.952,-13.796,10.414)
O2: (31.054,-15.216,14.604)
C6: (30.782,-16.952,11.535)
C5: (31.249,-16.053,10.660)
O3': (26.753,-19.039,13.108)
N3: (31.551,-14.569,12.485)
OP1: (28.488,-21.885,9.554)
OP2: (29.572,-19.917,8.322)
C2: (31.086,-15.470,13.406)
C1': (30.048,-17.636,13.802)
C3': (28.083,-18.574,12.875)
O5': (29.519,-20.007,10.820)
O4': (30.340,-18.949,13.353)
C5': (29.297,-20.667,12.053)
P: (29.546,-20.849,9.471)
C4': (29.104,-19.666,13.148)
C2': (28.522,-17.480,13.843)
O2': (28.072,-17.645,15.174)
N1: (30.663,-16.679,12.877)
O4: (31.952,-13.796,10.414)
O2: (31.054,-15.216,14.604)
C6: (30.782,-16.952,11.535)
C5: (31.249,-16.053,10.660)
O3': (26.753,-19.039,13.108)
OP1: (32.774,-21.730,4.682)
OP2: (33.548,-19.297,4.864)
C3': (32.156,-20.846,9.514)
C1': (34.077,-20.117,10.658)
C5': (33.474,-21.945,7.617)
O6: (35.180,-14.245,10.138)
O4': (34.489,-20.979,9.609)
C8: (34.561,-18.320,8.948)
C2: (34.493,-16.409,12.875)
C6: (34.920,-15.301,10.731)
C5: (34.740,-16.599,10.188)
C4: (34.469,-17.646,11.041)
P: (33.619,-20.702,5.329)
C4': (33.339,-21.699,9.098)
C2': (32.584,-20.365,10.889)
O2': (32.443,-21.382,11.853)
N1: (34.773,-15.302,12.111)
N2: (34.377,-16.201,14.195)
N3: (34.334,-17.626,12.382)
N7: (34.795,-17.038,8.871)
N9: (34.357,-18.753,10.235)
O5': (33.347,-20.728,6.897)
O3': (30.959,-21.605,9.529)
OP2: (33.548,-19.297,4.864)
C3': (32.156,-20.846,9.514)
C1': (34.077,-20.117,10.658)
C5': (33.474,-21.945,7.617)
O6: (35.180,-14.245,10.138)
O4': (34.489,-20.979,9.609)
C8: (34.561,-18.320,8.948)
C2: (34.493,-16.409,12.875)
C6: (34.920,-15.301,10.731)
C5: (34.740,-16.599,10.188)
C4: (34.469,-17.646,11.041)
P: (33.619,-20.702,5.329)
C4': (33.339,-21.699,9.098)
C2': (32.584,-20.365,10.889)
O2': (32.443,-21.382,11.853)
N1: (34.773,-15.302,12.111)
N2: (34.377,-16.201,14.195)
N3: (34.334,-17.626,12.382)
N7: (34.795,-17.038,8.871)
N9: (34.357,-18.753,10.235)
O5': (33.347,-20.728,6.897)
O3': (30.959,-21.605,9.529)
Image (generated by PyMOL):