Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A534:A533
Extra
PDB:
ATOM 1 O3' G A 533 57.762-110.637 -4.609 1.00 40.58 O
ATOM 2 P G A 534 59.077-110.782 -3.698 1.00 49.78 P
ATOM 3 OP1 G A 534 58.703-111.627 -2.539 1.00 46.75 O
ATOM 4 OP2 G A 534 59.661-109.434 -3.462 1.00 40.47 O
ATOM 5 O5' G A 534 60.133-111.555 -4.616 1.00 50.04 O
ATOM 6 C5' G A 534 59.926-112.904 -5.053 1.00 45.01 C
ATOM 7 C4' G A 534 61.088-113.364 -5.917 1.00 47.94 C
ATOM 8 O4' G A 534 61.173-112.544 -7.116 1.00 56.43 O
ATOM 9 C3' G A 534 62.460-113.242 -5.280 1.00 46.83 C
ATOM 10 O3' G A 534 62.776-114.383 -4.519 1.00 44.56 O
ATOM 11 C2' G A 534 63.382-113.126 -6.480 1.00 49.79 C
ATOM 12 O2' G A 534 63.625-114.402 -7.034 1.00 49.93 O
ATOM 13 C1' G A 534 62.535-112.288 -7.441 1.00 52.65 C
ATOM 14 N9 G A 534 62.774-110.847 -7.300 1.00 58.14 N
ATOM 15 C8 G A 534 61.958-109.939 -6.651 1.00 57.41 C
ATOM 16 N7 G A 534 62.426-108.720 -6.664 1.00 53.98 N
ATOM 17 C5 G A 534 63.620-108.816 -7.362 1.00 57.37 C
ATOM 18 C6 G A 534 64.572-107.812 -7.696 1.00 63.18 C
ATOM 19 O6 G A 534 64.545-106.595 -7.430 1.00 66.73 O
ATOM 20 N1 G A 534 65.639-108.343 -8.413 1.00 56.99 N
ATOM 21 C2 G A 534 65.775-109.665 -8.769 1.00 54.52 C
ATOM 22 N2 G A 534 66.885-109.973 -9.459 1.00 58.76 N
ATOM 23 N3 G A 534 64.894-110.611 -8.471 1.00 52.81 N
ATOM 24 C4 G A 534 63.851-110.121 -7.770 1.00 56.14 C
ATOM 25 P G A 535 63.901-114.285 -3.381 1.00 59.18 P
ATOM 26 OP1 G A 535 63.807-115.483 -2.511 1.00 55.33 O
ATOM 27 OP2 G A 535 63.802-112.930 -2.778 1.00 48.89 O
ATOM 28 O5' G A 535 65.267-114.406 -4.185 1.00 53.87 O
TER
ATOM 1 O3' U B 532 55.067-105.238 -5.694 1.00 45.44 O
ATOM 2 P G B 533 56.126-105.700 -4.586 1.00 50.37 P
ATOM 3 OP1 G B 533 55.383-105.924 -3.313 1.00 55.10 O
ATOM 4 OP2 G B 533 57.241-104.705 -4.629 1.00 45.12 O
ATOM 5 O5' G B 533 56.642-107.112 -5.126 1.00 48.52 O
ATOM 6 C5' G B 533 55.749-108.211 -5.272 1.00 43.82 C
ATOM 7 C4' G B 533 56.387-109.299 -6.100 1.00 43.39 C
ATOM 8 O4' G B 533 56.588-108.842 -7.462 1.00 47.53 O
ATOM 9 C3' G B 533 57.773-109.713 -5.665 1.00 43.05 C
ATOM 10 O3' G B 533 57.762-110.637 -4.609 1.00 40.58 O
ATOM 11 C2' G B 533 58.363-110.320 -6.923 1.00 46.74 C
ATOM 12 O2' G B 533 57.987-111.657 -7.115 1.00 47.91 O
ATOM 13 C1' G B 533 57.747-109.449 -8.007 1.00 46.08 C
ATOM 14 N9 G B 533 58.691-108.408 -8.396 1.00 50.19 N
ATOM 15 C8 G B 533 58.667-107.084 -8.026 1.00 47.57 C
ATOM 16 N7 G B 533 59.681-106.406 -8.488 1.00 50.44 N
ATOM 17 C5 G B 533 60.417-107.333 -9.216 1.00 54.70 C
ATOM 18 C6 G B 533 61.639-107.184 -9.941 1.00 56.66 C
ATOM 19 O6 G B 533 62.347-106.168 -10.069 1.00 56.31 O
ATOM 20 N1 G B 533 62.030-108.380 -10.537 1.00 55.02 N
ATOM 21 C2 G B 533 61.357-109.569 -10.434 1.00 54.30 C
ATOM 22 N2 G B 533 61.935-110.618 -11.051 1.00 58.28 N
ATOM 23 N3 G B 533 60.216-109.723 -9.767 1.00 54.20 N
ATOM 24 C4 G B 533 59.809-108.572 -9.184 1.00 54.12 C
ATOM 25 P G B 534 59.077-110.782 -3.698 1.00 49.78 P
ATOM 26 OP1 G B 534 58.703-111.627 -2.539 1.00 46.75 O
ATOM 27 OP2 G B 534 59.661-109.434 -3.462 1.00 40.47 O
ATOM 28 O5' G B 534 60.133-111.555 -4.616 1.00 50.04 O
TER
ATOM 2 P G A 534 59.077-110.782 -3.698 1.00 49.78 P
ATOM 3 OP1 G A 534 58.703-111.627 -2.539 1.00 46.75 O
ATOM 4 OP2 G A 534 59.661-109.434 -3.462 1.00 40.47 O
ATOM 5 O5' G A 534 60.133-111.555 -4.616 1.00 50.04 O
ATOM 6 C5' G A 534 59.926-112.904 -5.053 1.00 45.01 C
ATOM 7 C4' G A 534 61.088-113.364 -5.917 1.00 47.94 C
ATOM 8 O4' G A 534 61.173-112.544 -7.116 1.00 56.43 O
ATOM 9 C3' G A 534 62.460-113.242 -5.280 1.00 46.83 C
ATOM 10 O3' G A 534 62.776-114.383 -4.519 1.00 44.56 O
ATOM 11 C2' G A 534 63.382-113.126 -6.480 1.00 49.79 C
ATOM 12 O2' G A 534 63.625-114.402 -7.034 1.00 49.93 O
ATOM 13 C1' G A 534 62.535-112.288 -7.441 1.00 52.65 C
ATOM 14 N9 G A 534 62.774-110.847 -7.300 1.00 58.14 N
ATOM 15 C8 G A 534 61.958-109.939 -6.651 1.00 57.41 C
ATOM 16 N7 G A 534 62.426-108.720 -6.664 1.00 53.98 N
ATOM 17 C5 G A 534 63.620-108.816 -7.362 1.00 57.37 C
ATOM 18 C6 G A 534 64.572-107.812 -7.696 1.00 63.18 C
ATOM 19 O6 G A 534 64.545-106.595 -7.430 1.00 66.73 O
ATOM 20 N1 G A 534 65.639-108.343 -8.413 1.00 56.99 N
ATOM 21 C2 G A 534 65.775-109.665 -8.769 1.00 54.52 C
ATOM 22 N2 G A 534 66.885-109.973 -9.459 1.00 58.76 N
ATOM 23 N3 G A 534 64.894-110.611 -8.471 1.00 52.81 N
ATOM 24 C4 G A 534 63.851-110.121 -7.770 1.00 56.14 C
ATOM 25 P G A 535 63.901-114.285 -3.381 1.00 59.18 P
ATOM 26 OP1 G A 535 63.807-115.483 -2.511 1.00 55.33 O
ATOM 27 OP2 G A 535 63.802-112.930 -2.778 1.00 48.89 O
ATOM 28 O5' G A 535 65.267-114.406 -4.185 1.00 53.87 O
TER
ATOM 1 O3' U B 532 55.067-105.238 -5.694 1.00 45.44 O
ATOM 2 P G B 533 56.126-105.700 -4.586 1.00 50.37 P
ATOM 3 OP1 G B 533 55.383-105.924 -3.313 1.00 55.10 O
ATOM 4 OP2 G B 533 57.241-104.705 -4.629 1.00 45.12 O
ATOM 5 O5' G B 533 56.642-107.112 -5.126 1.00 48.52 O
ATOM 6 C5' G B 533 55.749-108.211 -5.272 1.00 43.82 C
ATOM 7 C4' G B 533 56.387-109.299 -6.100 1.00 43.39 C
ATOM 8 O4' G B 533 56.588-108.842 -7.462 1.00 47.53 O
ATOM 9 C3' G B 533 57.773-109.713 -5.665 1.00 43.05 C
ATOM 10 O3' G B 533 57.762-110.637 -4.609 1.00 40.58 O
ATOM 11 C2' G B 533 58.363-110.320 -6.923 1.00 46.74 C
ATOM 12 O2' G B 533 57.987-111.657 -7.115 1.00 47.91 O
ATOM 13 C1' G B 533 57.747-109.449 -8.007 1.00 46.08 C
ATOM 14 N9 G B 533 58.691-108.408 -8.396 1.00 50.19 N
ATOM 15 C8 G B 533 58.667-107.084 -8.026 1.00 47.57 C
ATOM 16 N7 G B 533 59.681-106.406 -8.488 1.00 50.44 N
ATOM 17 C5 G B 533 60.417-107.333 -9.216 1.00 54.70 C
ATOM 18 C6 G B 533 61.639-107.184 -9.941 1.00 56.66 C
ATOM 19 O6 G B 533 62.347-106.168 -10.069 1.00 56.31 O
ATOM 20 N1 G B 533 62.030-108.380 -10.537 1.00 55.02 N
ATOM 21 C2 G B 533 61.357-109.569 -10.434 1.00 54.30 C
ATOM 22 N2 G B 533 61.935-110.618 -11.051 1.00 58.28 N
ATOM 23 N3 G B 533 60.216-109.723 -9.767 1.00 54.20 N
ATOM 24 C4 G B 533 59.809-108.572 -9.184 1.00 54.12 C
ATOM 25 P G B 534 59.077-110.782 -3.698 1.00 49.78 P
ATOM 26 OP1 G B 534 58.703-111.627 -2.539 1.00 46.75 O
ATOM 27 OP2 G B 534 59.661-109.434 -3.462 1.00 40.47 O
ATOM 28 O5' G B 534 60.133-111.555 -4.616 1.00 50.04 O
TER
Atoms:
OP1: (58.703,-111.627,-2.539)
OP2: (59.661,-109.434,-3.462)
C3': (62.460,-113.242,-5.280)
C1': (62.535,-112.288,-7.441)
C5': (59.926,-112.904,-5.053)
O6: (64.545,-106.595,-7.430)
O4': (61.173,-112.544,-7.116)
C8: (61.958,-109.939,-6.651)
C2: (65.775,-109.665,-8.769)
C6: (64.572,-107.812,-7.696)
C5: (63.620,-108.816,-7.362)
C4: (63.851,-110.121,-7.770)
P: (59.077,-110.782,-3.698)
C4': (61.088,-113.364,-5.917)
C2': (63.382,-113.126,-6.480)
O2': (63.625,-114.402,-7.034)
N1: (65.639,-108.343,-8.413)
N2: (66.885,-109.973,-9.459)
N3: (64.894,-110.611,-8.471)
N7: (62.426,-108.720,-6.664)
N9: (62.774,-110.847,-7.300)
O5': (60.133,-111.555,-4.616)
O3': (62.776,-114.383,-4.519)
OP2: (59.661,-109.434,-3.462)
C3': (62.460,-113.242,-5.280)
C1': (62.535,-112.288,-7.441)
C5': (59.926,-112.904,-5.053)
O6: (64.545,-106.595,-7.430)
O4': (61.173,-112.544,-7.116)
C8: (61.958,-109.939,-6.651)
C2: (65.775,-109.665,-8.769)
C6: (64.572,-107.812,-7.696)
C5: (63.620,-108.816,-7.362)
C4: (63.851,-110.121,-7.770)
P: (59.077,-110.782,-3.698)
C4': (61.088,-113.364,-5.917)
C2': (63.382,-113.126,-6.480)
O2': (63.625,-114.402,-7.034)
N1: (65.639,-108.343,-8.413)
N2: (66.885,-109.973,-9.459)
N3: (64.894,-110.611,-8.471)
N7: (62.426,-108.720,-6.664)
N9: (62.774,-110.847,-7.300)
O5': (60.133,-111.555,-4.616)
O3': (62.776,-114.383,-4.519)
OP1: (55.383,-105.924,-3.313)
OP2: (57.241,-104.705,-4.629)
C3': (57.773,-109.713,-5.665)
C1': (57.747,-109.449,-8.007)
C5': (55.749,-108.211,-5.272)
O6: (62.347,-106.168,-10.069)
O4': (56.588,-108.842,-7.462)
C8: (58.667,-107.084,-8.026)
C2: (61.357,-109.569,-10.434)
C6: (61.639,-107.184,-9.941)
C5: (60.417,-107.333,-9.216)
C4: (59.809,-108.572,-9.184)
P: (56.126,-105.700,-4.586)
C4': (56.387,-109.299,-6.100)
C2': (58.363,-110.320,-6.923)
O2': (57.987,-111.657,-7.115)
N1: (62.030,-108.380,-10.537)
N2: (61.935,-110.618,-11.051)
N3: (60.216,-109.723,-9.767)
N7: (59.681,-106.406,-8.488)
N9: (58.691,-108.408,-8.396)
O5': (56.642,-107.112,-5.126)
O3': (57.762,-110.637,-4.609)
OP2: (57.241,-104.705,-4.629)
C3': (57.773,-109.713,-5.665)
C1': (57.747,-109.449,-8.007)
C5': (55.749,-108.211,-5.272)
O6: (62.347,-106.168,-10.069)
O4': (56.588,-108.842,-7.462)
C8: (58.667,-107.084,-8.026)
C2: (61.357,-109.569,-10.434)
C6: (61.639,-107.184,-9.941)
C5: (60.417,-107.333,-9.216)
C4: (59.809,-108.572,-9.184)
P: (56.126,-105.700,-4.586)
C4': (56.387,-109.299,-6.100)
C2': (58.363,-110.320,-6.923)
O2': (57.987,-111.657,-7.115)
N1: (62.030,-108.380,-10.537)
N2: (61.935,-110.618,-11.051)
N3: (60.216,-109.723,-9.767)
N7: (59.681,-106.406,-8.488)
N9: (58.691,-108.408,-8.396)
O5': (56.642,-107.112,-5.126)
O3': (57.762,-110.637,-4.609)
Image (generated by PyMOL):