ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1469:A1468

Extra

PDB:
ATOM 1 O3' G A1468 0.348 -30.167 -6.401 1.00 60.25 O
ATOM 2 P U A1469 -0.523 -31.445 -6.821 1.00 59.08 P
ATOM 3 OP1 U A1469 -0.772 -32.236 -5.591 1.00105.97 O
ATOM 4 OP2 U A1469 0.169 -32.094 -7.959 1.00102.05 O
ATOM 5 O5' U A1469 -1.881 -30.785 -7.326 1.00 85.49 O
ATOM 6 C5' U A1469 -2.647 -29.935 -6.481 1.00 73.49 C
ATOM 7 C4' U A1469 -3.769 -29.257 -7.236 1.00 67.89 C
ATOM 8 O4' U A1469 -3.224 -28.389 -8.258 1.00 69.61 O
ATOM 9 C3' U A1469 -4.711 -30.173 -7.996 1.00 75.75 C
ATOM 10 O3' U A1469 -5.685 -30.766 -7.159 1.00 79.96 O
ATOM 11 C2' U A1469 -5.297 -29.252 -9.060 1.00 72.23 C
ATOM 12 O2' U A1469 -6.362 -28.495 -8.522 1.00 77.04 O
ATOM 13 C1' U A1469 -4.121 -28.307 -9.344 1.00 72.52 C
ATOM 14 N1 U A1469 -3.397 -28.650 -10.603 1.00 81.74 N
ATOM 15 C2 U A1469 -3.675 -27.851 -11.690 1.00 84.46 C
ATOM 16 O2 U A1469 -4.456 -26.927 -11.629 1.00 92.49 O
ATOM 17 N3 U A1469 -3.023 -28.157 -12.852 1.00 80.89 N
ATOM 18 C4 U A1469 -2.126 -29.172 -13.048 1.00 76.33 C
ATOM 19 O4 U A1469 -1.626 -29.307 -14.163 1.00 80.46 O
ATOM 20 C5 U A1469 -1.877 -29.965 -11.887 1.00 72.71 C
ATOM 21 C6 U A1469 -2.494 -29.684 -10.733 1.00 77.52 C
ATOM 22 P G A1470 -6.278 -32.214 -7.506 1.00 62.62 P
ATOM 23 OP1 G A1470 -6.880 -32.751 -6.268 1.00120.62 O
ATOM 24 OP2 G A1470 -5.209 -32.990 -8.170 1.00112.14 O
ATOM 25 O5' G A1470 -7.408 -31.857 -8.546 1.00 85.48 O
TER

ATOM 1 O3' C B1467 5.768 -29.444 -9.051 1.00 62.27 O
ATOM 2 P G B1468 4.598 -30.538 -9.174 1.00 43.62 P
ATOM 3 OP1 G B1468 4.932 -31.644 -8.246 1.00103.73 O
ATOM 4 OP2 G B1468 4.438 -30.839 -10.615 1.00109.07 O
ATOM 5 O5' G B1468 3.333 -29.753 -8.641 1.00 59.95 O
ATOM 6 C5' G B1468 3.305 -29.231 -7.327 1.00 59.74 C
ATOM 7 C4' G B1468 2.018 -28.489 -7.041 1.00 59.15 C
ATOM 8 O4' G B1468 1.953 -27.280 -7.827 1.00 51.67 O
ATOM 9 C3' G B1468 0.721 -29.208 -7.378 1.00 58.88 C
ATOM 10 O3' G B1468 0.348 -30.167 -6.401 1.00 60.25 O
ATOM 11 C2' G B1468 -0.258 -28.059 -7.472 1.00 61.85 C
ATOM 12 O2' G B1468 -0.632 -27.637 -6.172 1.00 61.48 O
ATOM 13 C1' G B1468 0.606 -26.969 -8.100 1.00 53.76 C
ATOM 14 N9 G B1468 0.421 -26.886 -9.559 1.00 61.28 N
ATOM 15 C8 G B1468 1.225 -27.430 -10.519 1.00 62.92 C
ATOM 16 N7 G B1468 0.821 -27.183 -11.734 1.00 65.44 N
ATOM 17 C5 G B1468 -0.326 -26.426 -11.574 1.00 69.30 C
ATOM 18 C6 G B1468 -1.192 -25.868 -12.545 1.00 68.28 C
ATOM 19 O6 G B1468 -1.141 -25.928 -13.772 1.00 69.95 O
ATOM 20 N1 G B1468 -2.220 -25.174 -11.963 1.00 63.61 N
ATOM 21 C2 G B1468 -2.392 -25.042 -10.625 1.00 62.79 C
ATOM 22 N2 G B1468 -3.456 -24.324 -10.287 1.00 75.34 N
ATOM 23 N3 G B1468 -1.607 -25.542 -9.693 1.00 64.17 N
ATOM 24 C4 G B1468 -0.586 -26.227 -10.237 1.00 69.53 C
ATOM 25 P U B1469 -0.523 -31.445 -6.821 1.00 59.08 P
ATOM 26 OP1 U B1469 -0.772 -32.236 -5.591 1.00105.97 O
ATOM 27 OP2 U B1469 0.169 -32.094 -7.959 1.00102.05 O
ATOM 28 O5' U B1469 -1.881 -30.785 -7.326 1.00 85.49 O
TER

Atoms:
C4: (-2.126,-29.172,-13.048)
N3: (-3.023,-28.157,-12.852)
OP1: (-0.772,-32.236,-5.591)
OP2: (0.169,-32.094,-7.959)
C2: (-3.675,-27.851,-11.690)
C1': (-4.121,-28.307,-9.344)
C3': (-4.711,-30.173,-7.996)
O5': (-1.881,-30.785,-7.326)
O4': (-3.224,-28.389,-8.258)
C5': (-2.647,-29.935,-6.481)
P: (-0.523,-31.445,-6.821)
C4': (-3.769,-29.257,-7.236)
C2': (-5.297,-29.252,-9.060)
O2': (-6.362,-28.495,-8.522)
N1: (-3.397,-28.650,-10.603)
O4: (-1.626,-29.307,-14.163)
O2: (-4.456,-26.927,-11.629)
C6: (-2.494,-29.684,-10.733)
C5: (-1.877,-29.965,-11.887)
O3': (-5.685,-30.766,-7.159)
OP1: (4.932,-31.644,-8.246)
OP2: (4.438,-30.839,-10.615)
C3': (0.721,-29.208,-7.378)
C1': (0.606,-26.969,-8.100)
C5': (3.305,-29.231,-7.327)
O6: (-1.141,-25.928,-13.772)
O4': (1.953,-27.280,-7.827)
C8: (1.225,-27.430,-10.519)
C2: (-2.392,-25.042,-10.625)
C6: (-1.192,-25.868,-12.545)
C5: (-0.326,-26.426,-11.574)
C4: (-0.586,-26.227,-10.237)
P: (4.598,-30.538,-9.174)
C4': (2.018,-28.489,-7.041)
C2': (-0.258,-28.059,-7.472)
O2': (-0.632,-27.637,-6.172)
N1: (-2.220,-25.174,-11.963)
N2: (-3.456,-24.324,-10.287)
N3: (-1.607,-25.542,-9.693)
N7: (0.821,-27.183,-11.734)
N9: (0.421,-26.886,-9.559)
O5': (3.333,-29.753,-8.641)
O3': (0.348,-30.167,-6.401)
Image (generated by PyMOL):
PyMOL image
show in jmol