Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1634:1632
Extra
PDB:
ATOM 1 O3' U A 633 94.782 -23.115 102.975 1.00 50.89 O
ATOM 2 P A A 634 93.459 -22.481 103.522 1.00 52.90 P
ATOM 3 OP1 A A 634 93.067 -21.438 102.554 1.00 52.44 O
ATOM 4 OP2 A A 634 93.697 -22.110 104.929 1.00 53.32 O
ATOM 5 O5' A A 634 92.450 -23.700 103.457 1.00 52.73 O
ATOM 6 C5' A A 634 91.699 -23.979 102.276 1.00 52.25 C
ATOM 7 C4' A A 634 90.269 -24.224 102.605 1.00 52.00 C
ATOM 8 O4' A A 634 90.185 -25.367 103.488 1.00 52.34 O
ATOM 9 C3' A A 634 89.603 -23.078 103.346 1.00 51.92 C
ATOM 10 O3' A A 634 88.197 -23.067 103.073 1.00 51.50 O
ATOM 11 C2' A A 634 89.802 -23.480 104.784 1.00 52.40 C
ATOM 12 O2' A A 634 88.894 -22.901 105.673 1.00 52.37 O
ATOM 13 C1' A A 634 89.596 -24.971 104.699 1.00 52.48 C
ATOM 14 N9 A A 634 90.207 -25.727 105.808 1.00 53.03 N
ATOM 15 C8 A A 634 91.438 -26.341 105.914 1.00 53.44 C
ATOM 16 N7 A A 634 91.629 -26.937 107.072 1.00 53.89 N
ATOM 17 C5 A A 634 90.448 -26.701 107.782 1.00 53.77 C
ATOM 18 C6 A A 634 89.996 -27.059 109.074 1.00 54.09 C
ATOM 19 N6 A A 634 90.689 -27.773 109.959 1.00 54.62 N
ATOM 20 N1 A A 634 88.769 -26.647 109.472 1.00 53.85 N
ATOM 21 C2 A A 634 88.036 -25.929 108.614 1.00 53.33 C
ATOM 22 N3 A A 634 88.347 -25.550 107.387 1.00 53.00 N
ATOM 23 C4 A A 634 89.575 -25.969 107.019 1.00 53.24 C
ATOM 24 P A A 635 87.595 -22.714 101.606 1.00 44.14 P
ATOM 25 OP1 A A 635 88.679 -22.769 100.585 1.00 44.15 O
ATOM 26 OP2 A A 635 86.863 -21.455 101.748 1.00 43.89 O
ATOM 27 O5' A A 635 86.606 -23.938 101.371 1.00 43.97 O
TER
ATOM 1 O3' U B 631 94.745 -34.244 107.193 1.00 52.22 O
ATOM 2 P G B 632 95.021 -32.875 108.028 1.00 51.46 P
ATOM 3 OP1 G B 632 96.438 -32.983 108.564 1.00 52.04 O
ATOM 4 OP2 G B 632 93.927 -32.686 108.993 1.00 51.42 O
ATOM 5 O5' G B 632 94.924 -31.740 106.909 1.00 50.93 O
ATOM 6 C5' G B 632 95.691 -31.811 105.726 1.00 50.81 C
ATOM 7 C4' G B 632 95.216 -30.820 104.720 1.00 50.25 C
ATOM 8 O4' G B 632 93.877 -31.185 104.288 1.00 49.82 O
ATOM 9 C3' G B 632 95.077 -29.397 105.217 1.00 50.15 C
ATOM 10 O3' G B 632 96.308 -28.689 105.194 1.00 50.40 O
ATOM 11 C2' G B 632 93.997 -28.821 104.287 1.00 49.52 C
ATOM 12 O2' G B 632 94.545 -28.471 103.030 1.00 49.28 O
ATOM 13 C1' G B 632 93.088 -30.031 104.096 1.00 49.39 C
ATOM 14 N9 G B 632 92.023 -30.050 105.096 1.00 49.39 N
ATOM 15 C8 G B 632 92.133 -30.582 106.342 1.00 49.84 C
ATOM 16 N7 G B 632 91.059 -30.459 107.083 1.00 49.76 N
ATOM 17 C5 G B 632 90.180 -29.768 106.262 1.00 49.20 C
ATOM 18 C6 G B 632 88.858 -29.315 106.501 1.00 48.88 C
ATOM 19 O6 G B 632 88.136 -29.410 107.471 1.00 48.99 O
ATOM 20 N1 G B 632 88.325 -28.695 105.419 1.00 48.36 N
ATOM 21 C2 G B 632 88.965 -28.500 104.237 1.00 48.16 C
ATOM 22 N2 G B 632 88.225 -27.852 103.329 1.00 47.66 N
ATOM 23 N3 G B 632 90.208 -28.889 103.975 1.00 48.45 N
ATOM 24 C4 G B 632 90.764 -29.523 105.031 1.00 48.97 C
ATOM 25 P U B 633 96.571 -27.446 106.192 1.00 52.76 P
ATOM 26 OP1 U B 633 98.042 -27.351 106.407 1.00 53.24 O
ATOM 27 OP2 U B 633 95.670 -27.631 107.362 1.00 52.88 O
ATOM 28 O5' U B 633 96.090 -26.195 105.353 1.00 52.24 O
TER
ATOM 2 P A A 634 93.459 -22.481 103.522 1.00 52.90 P
ATOM 3 OP1 A A 634 93.067 -21.438 102.554 1.00 52.44 O
ATOM 4 OP2 A A 634 93.697 -22.110 104.929 1.00 53.32 O
ATOM 5 O5' A A 634 92.450 -23.700 103.457 1.00 52.73 O
ATOM 6 C5' A A 634 91.699 -23.979 102.276 1.00 52.25 C
ATOM 7 C4' A A 634 90.269 -24.224 102.605 1.00 52.00 C
ATOM 8 O4' A A 634 90.185 -25.367 103.488 1.00 52.34 O
ATOM 9 C3' A A 634 89.603 -23.078 103.346 1.00 51.92 C
ATOM 10 O3' A A 634 88.197 -23.067 103.073 1.00 51.50 O
ATOM 11 C2' A A 634 89.802 -23.480 104.784 1.00 52.40 C
ATOM 12 O2' A A 634 88.894 -22.901 105.673 1.00 52.37 O
ATOM 13 C1' A A 634 89.596 -24.971 104.699 1.00 52.48 C
ATOM 14 N9 A A 634 90.207 -25.727 105.808 1.00 53.03 N
ATOM 15 C8 A A 634 91.438 -26.341 105.914 1.00 53.44 C
ATOM 16 N7 A A 634 91.629 -26.937 107.072 1.00 53.89 N
ATOM 17 C5 A A 634 90.448 -26.701 107.782 1.00 53.77 C
ATOM 18 C6 A A 634 89.996 -27.059 109.074 1.00 54.09 C
ATOM 19 N6 A A 634 90.689 -27.773 109.959 1.00 54.62 N
ATOM 20 N1 A A 634 88.769 -26.647 109.472 1.00 53.85 N
ATOM 21 C2 A A 634 88.036 -25.929 108.614 1.00 53.33 C
ATOM 22 N3 A A 634 88.347 -25.550 107.387 1.00 53.00 N
ATOM 23 C4 A A 634 89.575 -25.969 107.019 1.00 53.24 C
ATOM 24 P A A 635 87.595 -22.714 101.606 1.00 44.14 P
ATOM 25 OP1 A A 635 88.679 -22.769 100.585 1.00 44.15 O
ATOM 26 OP2 A A 635 86.863 -21.455 101.748 1.00 43.89 O
ATOM 27 O5' A A 635 86.606 -23.938 101.371 1.00 43.97 O
TER
ATOM 1 O3' U B 631 94.745 -34.244 107.193 1.00 52.22 O
ATOM 2 P G B 632 95.021 -32.875 108.028 1.00 51.46 P
ATOM 3 OP1 G B 632 96.438 -32.983 108.564 1.00 52.04 O
ATOM 4 OP2 G B 632 93.927 -32.686 108.993 1.00 51.42 O
ATOM 5 O5' G B 632 94.924 -31.740 106.909 1.00 50.93 O
ATOM 6 C5' G B 632 95.691 -31.811 105.726 1.00 50.81 C
ATOM 7 C4' G B 632 95.216 -30.820 104.720 1.00 50.25 C
ATOM 8 O4' G B 632 93.877 -31.185 104.288 1.00 49.82 O
ATOM 9 C3' G B 632 95.077 -29.397 105.217 1.00 50.15 C
ATOM 10 O3' G B 632 96.308 -28.689 105.194 1.00 50.40 O
ATOM 11 C2' G B 632 93.997 -28.821 104.287 1.00 49.52 C
ATOM 12 O2' G B 632 94.545 -28.471 103.030 1.00 49.28 O
ATOM 13 C1' G B 632 93.088 -30.031 104.096 1.00 49.39 C
ATOM 14 N9 G B 632 92.023 -30.050 105.096 1.00 49.39 N
ATOM 15 C8 G B 632 92.133 -30.582 106.342 1.00 49.84 C
ATOM 16 N7 G B 632 91.059 -30.459 107.083 1.00 49.76 N
ATOM 17 C5 G B 632 90.180 -29.768 106.262 1.00 49.20 C
ATOM 18 C6 G B 632 88.858 -29.315 106.501 1.00 48.88 C
ATOM 19 O6 G B 632 88.136 -29.410 107.471 1.00 48.99 O
ATOM 20 N1 G B 632 88.325 -28.695 105.419 1.00 48.36 N
ATOM 21 C2 G B 632 88.965 -28.500 104.237 1.00 48.16 C
ATOM 22 N2 G B 632 88.225 -27.852 103.329 1.00 47.66 N
ATOM 23 N3 G B 632 90.208 -28.889 103.975 1.00 48.45 N
ATOM 24 C4 G B 632 90.764 -29.523 105.031 1.00 48.97 C
ATOM 25 P U B 633 96.571 -27.446 106.192 1.00 52.76 P
ATOM 26 OP1 U B 633 98.042 -27.351 106.407 1.00 53.24 O
ATOM 27 OP2 U B 633 95.670 -27.631 107.362 1.00 52.88 O
ATOM 28 O5' U B 633 96.090 -26.195 105.353 1.00 52.24 O
TER
Atoms:
OP1: (93.067,-21.438,102.554)
OP2: (93.697,-22.110,104.929)
C3': (89.603,-23.078,103.346)
C1': (89.596,-24.971,104.699)
C5': (91.699,-23.979,102.276)
O4': (90.185,-25.367,103.488)
C8: (91.438,-26.341,105.914)
O2': (88.894,-22.901,105.673)
C6: (89.996,-27.059,109.074)
C5: (90.448,-26.701,107.782)
C4: (89.575,-25.969,107.019)
P: (93.459,-22.481,103.522)
C4': (90.269,-24.224,102.605)
C2': (89.802,-23.480,104.784)
C2: (88.036,-25.929,108.614)
N1: (88.769,-26.647,109.472)
N3: (88.347,-25.550,107.387)
N6: (90.689,-27.773,109.959)
N7: (91.629,-26.937,107.072)
N9: (90.207,-25.727,105.808)
O5': (92.450,-23.700,103.457)
O3': (88.197,-23.067,103.073)
OP2: (93.697,-22.110,104.929)
C3': (89.603,-23.078,103.346)
C1': (89.596,-24.971,104.699)
C5': (91.699,-23.979,102.276)
O4': (90.185,-25.367,103.488)
C8: (91.438,-26.341,105.914)
O2': (88.894,-22.901,105.673)
C6: (89.996,-27.059,109.074)
C5: (90.448,-26.701,107.782)
C4: (89.575,-25.969,107.019)
P: (93.459,-22.481,103.522)
C4': (90.269,-24.224,102.605)
C2': (89.802,-23.480,104.784)
C2: (88.036,-25.929,108.614)
N1: (88.769,-26.647,109.472)
N3: (88.347,-25.550,107.387)
N6: (90.689,-27.773,109.959)
N7: (91.629,-26.937,107.072)
N9: (90.207,-25.727,105.808)
O5': (92.450,-23.700,103.457)
O3': (88.197,-23.067,103.073)
OP1: (96.438,-32.983,108.564)
OP2: (93.927,-32.686,108.993)
C3': (95.077,-29.397,105.217)
C1': (93.088,-30.031,104.096)
C5': (95.691,-31.811,105.726)
O6: (88.136,-29.410,107.471)
O4': (93.877,-31.185,104.288)
C8: (92.133,-30.582,106.342)
C2: (88.965,-28.500,104.237)
C6: (88.858,-29.315,106.501)
C5: (90.180,-29.768,106.262)
C4: (90.764,-29.523,105.031)
P: (95.021,-32.875,108.028)
C4': (95.216,-30.820,104.720)
C2': (93.997,-28.821,104.287)
O2': (94.545,-28.471,103.030)
N1: (88.325,-28.695,105.419)
N2: (88.225,-27.852,103.329)
N3: (90.208,-28.889,103.975)
N7: (91.059,-30.459,107.083)
N9: (92.023,-30.050,105.096)
O5': (94.924,-31.740,106.909)
O3': (96.308,-28.689,105.194)
OP2: (93.927,-32.686,108.993)
C3': (95.077,-29.397,105.217)
C1': (93.088,-30.031,104.096)
C5': (95.691,-31.811,105.726)
O6: (88.136,-29.410,107.471)
O4': (93.877,-31.185,104.288)
C8: (92.133,-30.582,106.342)
C2: (88.965,-28.500,104.237)
C6: (88.858,-29.315,106.501)
C5: (90.180,-29.768,106.262)
C4: (90.764,-29.523,105.031)
P: (95.021,-32.875,108.028)
C4': (95.216,-30.820,104.720)
C2': (93.997,-28.821,104.287)
O2': (94.545,-28.471,103.030)
N1: (88.325,-28.695,105.419)
N2: (88.225,-27.852,103.329)
N3: (90.208,-28.889,103.975)
N7: (91.059,-30.459,107.083)
N9: (92.023,-30.050,105.096)
O5': (94.924,-31.740,106.909)
O3': (96.308,-28.689,105.194)
Image (generated by PyMOL):