Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:Z6:Z5
Extra
PDB:
ATOM 1 O3' G A 5 22.627 -64.883 -66.610 1.00 71.66 O
ATOM 2 P A A 6 23.294 -63.583 -65.957 1.00 82.53 P
ATOM 3 OP1 A A 6 24.014 -64.031 -64.740 1.00 83.70 O
ATOM 4 OP2 A A 6 22.229 -62.559 -65.821 1.00 71.59 O
ATOM 5 O5' A A 6 24.336 -63.136 -67.069 1.00 80.00 O
ATOM 6 C5' A A 6 25.224 -64.079 -67.647 1.00 86.47 C
ATOM 7 C4' A A 6 25.407 -63.824 -69.115 1.00 81.53 C
ATOM 8 O4' A A 6 24.169 -64.095 -69.811 1.00 80.52 O
ATOM 9 C3' A A 6 25.754 -62.396 -69.492 1.00 71.32 C
ATOM 10 O3' A A 6 27.142 -62.135 -69.385 1.00 75.44 O
ATOM 11 C2' A A 6 25.222 -62.270 -70.916 1.00 69.10 C
ATOM 12 O2' A A 6 26.163 -62.773 -71.852 1.00 73.73 O
ATOM 13 C1' A A 6 24.015 -63.209 -70.893 1.00 72.71 C
ATOM 14 N9 A A 6 22.738 -62.490 -70.730 1.00 66.54 N
ATOM 15 C8 A A 6 22.256 -61.820 -69.634 1.00 62.57 C
ATOM 16 N7 A A 6 21.061 -61.304 -69.820 1.00 60.94 N
ATOM 17 C5 A A 6 20.731 -61.669 -71.121 1.00 63.56 C
ATOM 18 C6 A A 6 19.596 -61.439 -71.927 1.00 64.88 C
ATOM 19 N6 A A 6 18.524 -60.750 -71.533 1.00 64.74 N
ATOM 20 N1 A A 6 19.596 -61.942 -73.178 1.00 67.62 N
ATOM 21 C2 A A 6 20.665 -62.632 -73.587 1.00 69.41 C
ATOM 22 N3 A A 6 21.786 -62.920 -72.930 1.00 69.63 N
ATOM 23 C4 A A 6 21.756 -62.403 -71.689 1.00 66.33 C
ATOM 24 P U A 7 27.676 -60.795 -68.678 1.00 81.65 P
ATOM 25 OP1 U A 7 27.086 -60.751 -67.314 1.00 79.79 O
ATOM 26 OP2 U A 7 29.158 -60.794 -68.818 1.00 84.65 O
ATOM 27 O5' U A 7 27.042 -59.643 -69.581 1.00 73.21 O
TER
ATOM 1 O3' U B 4 16.496 -67.481 -65.162 1.00194.71 O
ATOM 2 P G B 5 18.065 -67.331 -64.846 1.00136.71 P
ATOM 3 OP1 G B 5 18.244 -67.530 -63.386 1.00138.56 O
ATOM 4 OP2 G B 5 18.785 -68.234 -65.779 1.00143.94 O
ATOM 5 O5' G B 5 18.354 -65.812 -65.227 1.00116.63 O
ATOM 6 C5' G B 5 19.681 -65.320 -65.298 1.00 95.02 C
ATOM 7 C4' G B 5 20.382 -65.804 -66.541 1.00 88.18 C
ATOM 8 O4' G B 5 19.410 -66.107 -67.566 1.00 89.03 O
ATOM 9 C3' G B 5 21.336 -64.814 -67.181 1.00 75.04 C
ATOM 10 O3' G B 5 22.627 -64.883 -66.610 1.00 71.66 O
ATOM 11 C2' G B 5 21.312 -65.189 -68.658 1.00 76.75 C
ATOM 12 O2' G B 5 22.239 -66.231 -68.921 1.00 86.05 O
ATOM 13 C1' G B 5 19.901 -65.746 -68.833 1.00 81.55 C
ATOM 14 N9 G B 5 18.961 -64.779 -69.427 1.00 75.60 N
ATOM 15 C8 G B 5 18.282 -63.806 -68.739 1.00 71.29 C
ATOM 16 N7 G B 5 17.459 -63.123 -69.486 1.00 69.68 N
ATOM 17 C5 G B 5 17.579 -63.698 -70.741 1.00 72.31 C
ATOM 18 C6 G B 5 16.920 -63.374 -71.957 1.00 72.09 C
ATOM 19 O6 G B 5 16.081 -62.486 -72.159 1.00 71.64 O
ATOM 20 N1 G B 5 17.327 -64.200 -73.001 1.00 70.97 N
ATOM 21 C2 G B 5 18.250 -65.208 -72.884 1.00 73.83 C
ATOM 22 N2 G B 5 18.509 -65.893 -74.008 1.00 74.01 N
ATOM 23 N3 G B 5 18.869 -65.520 -71.752 1.00 79.43 N
ATOM 24 C4 G B 5 18.491 -64.732 -70.723 1.00 76.39 C
ATOM 25 P A B 6 23.294 -63.583 -65.957 1.00 82.53 P
ATOM 26 OP1 A B 6 24.014 -64.031 -64.740 1.00 83.70 O
ATOM 27 OP2 A B 6 22.229 -62.559 -65.821 1.00 71.59 O
ATOM 28 O5' A B 6 24.336 -63.136 -67.069 1.00 80.00 O
TER
ATOM 2 P A A 6 23.294 -63.583 -65.957 1.00 82.53 P
ATOM 3 OP1 A A 6 24.014 -64.031 -64.740 1.00 83.70 O
ATOM 4 OP2 A A 6 22.229 -62.559 -65.821 1.00 71.59 O
ATOM 5 O5' A A 6 24.336 -63.136 -67.069 1.00 80.00 O
ATOM 6 C5' A A 6 25.224 -64.079 -67.647 1.00 86.47 C
ATOM 7 C4' A A 6 25.407 -63.824 -69.115 1.00 81.53 C
ATOM 8 O4' A A 6 24.169 -64.095 -69.811 1.00 80.52 O
ATOM 9 C3' A A 6 25.754 -62.396 -69.492 1.00 71.32 C
ATOM 10 O3' A A 6 27.142 -62.135 -69.385 1.00 75.44 O
ATOM 11 C2' A A 6 25.222 -62.270 -70.916 1.00 69.10 C
ATOM 12 O2' A A 6 26.163 -62.773 -71.852 1.00 73.73 O
ATOM 13 C1' A A 6 24.015 -63.209 -70.893 1.00 72.71 C
ATOM 14 N9 A A 6 22.738 -62.490 -70.730 1.00 66.54 N
ATOM 15 C8 A A 6 22.256 -61.820 -69.634 1.00 62.57 C
ATOM 16 N7 A A 6 21.061 -61.304 -69.820 1.00 60.94 N
ATOM 17 C5 A A 6 20.731 -61.669 -71.121 1.00 63.56 C
ATOM 18 C6 A A 6 19.596 -61.439 -71.927 1.00 64.88 C
ATOM 19 N6 A A 6 18.524 -60.750 -71.533 1.00 64.74 N
ATOM 20 N1 A A 6 19.596 -61.942 -73.178 1.00 67.62 N
ATOM 21 C2 A A 6 20.665 -62.632 -73.587 1.00 69.41 C
ATOM 22 N3 A A 6 21.786 -62.920 -72.930 1.00 69.63 N
ATOM 23 C4 A A 6 21.756 -62.403 -71.689 1.00 66.33 C
ATOM 24 P U A 7 27.676 -60.795 -68.678 1.00 81.65 P
ATOM 25 OP1 U A 7 27.086 -60.751 -67.314 1.00 79.79 O
ATOM 26 OP2 U A 7 29.158 -60.794 -68.818 1.00 84.65 O
ATOM 27 O5' U A 7 27.042 -59.643 -69.581 1.00 73.21 O
TER
ATOM 1 O3' U B 4 16.496 -67.481 -65.162 1.00194.71 O
ATOM 2 P G B 5 18.065 -67.331 -64.846 1.00136.71 P
ATOM 3 OP1 G B 5 18.244 -67.530 -63.386 1.00138.56 O
ATOM 4 OP2 G B 5 18.785 -68.234 -65.779 1.00143.94 O
ATOM 5 O5' G B 5 18.354 -65.812 -65.227 1.00116.63 O
ATOM 6 C5' G B 5 19.681 -65.320 -65.298 1.00 95.02 C
ATOM 7 C4' G B 5 20.382 -65.804 -66.541 1.00 88.18 C
ATOM 8 O4' G B 5 19.410 -66.107 -67.566 1.00 89.03 O
ATOM 9 C3' G B 5 21.336 -64.814 -67.181 1.00 75.04 C
ATOM 10 O3' G B 5 22.627 -64.883 -66.610 1.00 71.66 O
ATOM 11 C2' G B 5 21.312 -65.189 -68.658 1.00 76.75 C
ATOM 12 O2' G B 5 22.239 -66.231 -68.921 1.00 86.05 O
ATOM 13 C1' G B 5 19.901 -65.746 -68.833 1.00 81.55 C
ATOM 14 N9 G B 5 18.961 -64.779 -69.427 1.00 75.60 N
ATOM 15 C8 G B 5 18.282 -63.806 -68.739 1.00 71.29 C
ATOM 16 N7 G B 5 17.459 -63.123 -69.486 1.00 69.68 N
ATOM 17 C5 G B 5 17.579 -63.698 -70.741 1.00 72.31 C
ATOM 18 C6 G B 5 16.920 -63.374 -71.957 1.00 72.09 C
ATOM 19 O6 G B 5 16.081 -62.486 -72.159 1.00 71.64 O
ATOM 20 N1 G B 5 17.327 -64.200 -73.001 1.00 70.97 N
ATOM 21 C2 G B 5 18.250 -65.208 -72.884 1.00 73.83 C
ATOM 22 N2 G B 5 18.509 -65.893 -74.008 1.00 74.01 N
ATOM 23 N3 G B 5 18.869 -65.520 -71.752 1.00 79.43 N
ATOM 24 C4 G B 5 18.491 -64.732 -70.723 1.00 76.39 C
ATOM 25 P A B 6 23.294 -63.583 -65.957 1.00 82.53 P
ATOM 26 OP1 A B 6 24.014 -64.031 -64.740 1.00 83.70 O
ATOM 27 OP2 A B 6 22.229 -62.559 -65.821 1.00 71.59 O
ATOM 28 O5' A B 6 24.336 -63.136 -67.069 1.00 80.00 O
TER
Atoms:
OP1: (24.014,-64.031,-64.740)
OP2: (22.229,-62.559,-65.821)
C3': (25.754,-62.396,-69.492)
C1': (24.015,-63.209,-70.893)
C5': (25.224,-64.079,-67.647)
O4': (24.169,-64.095,-69.811)
C8: (22.256,-61.820,-69.634)
O2': (26.163,-62.773,-71.852)
C6: (19.596,-61.439,-71.927)
C5: (20.731,-61.669,-71.121)
C4: (21.756,-62.403,-71.689)
P: (23.294,-63.583,-65.957)
C4': (25.407,-63.824,-69.115)
C2': (25.222,-62.270,-70.916)
C2: (20.665,-62.632,-73.587)
N1: (19.596,-61.942,-73.178)
N3: (21.786,-62.920,-72.930)
N6: (18.524,-60.750,-71.533)
N7: (21.061,-61.304,-69.820)
N9: (22.738,-62.490,-70.730)
O5': (24.336,-63.136,-67.069)
O3': (27.142,-62.135,-69.385)
OP2: (22.229,-62.559,-65.821)
C3': (25.754,-62.396,-69.492)
C1': (24.015,-63.209,-70.893)
C5': (25.224,-64.079,-67.647)
O4': (24.169,-64.095,-69.811)
C8: (22.256,-61.820,-69.634)
O2': (26.163,-62.773,-71.852)
C6: (19.596,-61.439,-71.927)
C5: (20.731,-61.669,-71.121)
C4: (21.756,-62.403,-71.689)
P: (23.294,-63.583,-65.957)
C4': (25.407,-63.824,-69.115)
C2': (25.222,-62.270,-70.916)
C2: (20.665,-62.632,-73.587)
N1: (19.596,-61.942,-73.178)
N3: (21.786,-62.920,-72.930)
N6: (18.524,-60.750,-71.533)
N7: (21.061,-61.304,-69.820)
N9: (22.738,-62.490,-70.730)
O5': (24.336,-63.136,-67.069)
O3': (27.142,-62.135,-69.385)
OP1: (18.244,-67.530,-63.386)
OP2: (18.785,-68.234,-65.779)
C3': (21.336,-64.814,-67.181)
C1': (19.901,-65.746,-68.833)
C5': (19.681,-65.320,-65.298)
O6: (16.081,-62.486,-72.159)
O4': (19.410,-66.107,-67.566)
C8: (18.282,-63.806,-68.739)
C2: (18.250,-65.208,-72.884)
C6: (16.920,-63.374,-71.957)
C5: (17.579,-63.698,-70.741)
C4: (18.491,-64.732,-70.723)
P: (18.065,-67.331,-64.846)
C4': (20.382,-65.804,-66.541)
C2': (21.312,-65.189,-68.658)
O2': (22.239,-66.231,-68.921)
N1: (17.327,-64.200,-73.001)
N2: (18.509,-65.893,-74.008)
N3: (18.869,-65.520,-71.752)
N7: (17.459,-63.123,-69.486)
N9: (18.961,-64.779,-69.427)
O5': (18.354,-65.812,-65.227)
O3': (22.627,-64.883,-66.610)
OP2: (18.785,-68.234,-65.779)
C3': (21.336,-64.814,-67.181)
C1': (19.901,-65.746,-68.833)
C5': (19.681,-65.320,-65.298)
O6: (16.081,-62.486,-72.159)
O4': (19.410,-66.107,-67.566)
C8: (18.282,-63.806,-68.739)
C2: (18.250,-65.208,-72.884)
C6: (16.920,-63.374,-71.957)
C5: (17.579,-63.698,-70.741)
C4: (18.491,-64.732,-70.723)
P: (18.065,-67.331,-64.846)
C4': (20.382,-65.804,-66.541)
C2': (21.312,-65.189,-68.658)
O2': (22.239,-66.231,-68.921)
N1: (17.327,-64.200,-73.001)
N2: (18.509,-65.893,-74.008)
N3: (18.869,-65.520,-71.752)
N7: (17.459,-63.123,-69.486)
N9: (18.961,-64.779,-69.427)
O5': (18.354,-65.812,-65.227)
O3': (22.627,-64.883,-66.610)
Image (generated by PyMOL):