Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3ND3:A7:A6
Extra
PDB:
ATOM 1 O3' G A 6 16.499 9.578 -1.526 1.00 36.13 O
ATOM 2 P A A 7 15.454 9.657 -2.767 1.00 38.47 P
ATOM 3 OP1 A A 7 16.209 9.224 -3.992 1.00 42.47 O
ATOM 4 OP2 A A 7 14.832 10.987 -2.753 1.00 37.00 O
ATOM 5 O5' A A 7 14.364 8.595 -2.398 1.00 42.22 O
ATOM 6 C5' A A 7 14.678 7.222 -2.344 1.00 47.85 C
ATOM 7 C4' A A 7 13.516 6.443 -1.829 1.00 46.53 C
ATOM 8 O4' A A 7 13.131 6.959 -0.529 1.00 45.48 O
ATOM 9 C3' A A 7 12.245 6.556 -2.644 1.00 47.09 C
ATOM 10 O3' A A 7 12.252 5.737 -3.796 1.00 47.17 O
ATOM 11 C2' A A 7 11.189 6.174 -1.620 1.00 48.63 C
ATOM 12 O2' A A 7 11.190 4.778 -1.396 1.00 51.55 O
ATOM 13 C1' A A 7 11.734 6.861 -0.373 1.00 46.64 C
ATOM 14 N9 A A 7 11.196 8.230 -0.210 1.00 45.62 N
ATOM 15 C8 A A 7 11.869 9.411 -0.412 1.00 44.01 C
ATOM 16 N7 A A 7 11.146 10.470 -0.163 1.00 43.07 N
ATOM 17 C5 A A 7 9.936 9.962 0.261 1.00 41.76 C
ATOM 18 C6 A A 7 8.760 10.568 0.677 1.00 42.64 C
ATOM 19 N6 A A 7 8.623 11.862 0.794 1.00 48.11 N
ATOM 20 N1 A A 7 7.729 9.777 1.025 1.00 44.98 N
ATOM 21 C2 A A 7 7.897 8.450 0.977 1.00 45.40 C
ATOM 22 N3 A A 7 8.951 7.771 0.588 1.00 46.51 N
ATOM 23 C4 A A 7 9.953 8.582 0.242 1.00 44.89 C
ATOM 24 P U A 8 11.535 6.217 -5.162 1.00 48.54 P
ATOM 25 OP1 U A 8 11.953 5.255 -6.235 1.00 50.52 O
ATOM 26 OP2 U A 8 11.821 7.653 -5.349 1.00 47.88 O
ATOM 27 O5' U A 8 9.994 6.005 -4.848 1.00 45.95 O
TER
ATOM 1 O3' A B 5 18.788 14.488 1.563 1.00 43.53 O
ATOM 2 P G B 6 17.995 14.215 0.184 1.00 45.70 P
ATOM 3 OP1 G B 6 19.015 14.226 -0.890 1.00 47.95 O
ATOM 4 OP2 G B 6 16.897 15.190 0.118 1.00 49.89 O
ATOM 5 O5' G B 6 17.363 12.755 0.348 1.00 42.88 O
ATOM 6 C5' G B 6 18.147 11.606 0.287 1.00 47.66 C
ATOM 7 C4' G B 6 17.346 10.372 0.612 1.00 42.35 C
ATOM 8 O4' G B 6 16.748 10.480 1.922 1.00 34.65 O
ATOM 9 C3' G B 6 16.148 10.045 -0.249 1.00 37.95 C
ATOM 10 O3' G B 6 16.499 9.578 -1.526 1.00 36.13 O
ATOM 11 C2' G B 6 15.511 8.975 0.600 1.00 33.17 C
ATOM 12 O2' G B 6 16.299 7.800 0.549 1.00 33.79 O
ATOM 13 C1' G B 6 15.664 9.597 1.991 1.00 32.93 C
ATOM 14 N9 G B 6 14.464 10.336 2.378 1.00 31.38 N
ATOM 15 C8 G B 6 14.223 11.687 2.420 1.00 32.48 C
ATOM 16 N7 G B 6 12.989 11.957 2.760 1.00 30.38 N
ATOM 17 C5 G B 6 12.405 10.710 2.967 1.00 29.76 C
ATOM 18 C6 G B 6 11.089 10.360 3.379 1.00 26.81 C
ATOM 19 O6 G B 6 10.169 11.119 3.678 1.00 26.15 O
ATOM 20 N1 G B 6 10.903 8.986 3.415 1.00 27.51 N
ATOM 21 C2 G B 6 11.859 8.052 3.137 1.00 30.70 C
ATOM 22 N2 G B 6 11.485 6.769 3.264 1.00 32.37 N
ATOM 23 N3 G B 6 13.087 8.352 2.781 1.00 30.30 N
ATOM 24 C4 G B 6 13.295 9.694 2.722 1.00 30.60 C
ATOM 25 P A B 7 15.454 9.657 -2.767 1.00 38.47 P
ATOM 26 OP1 A B 7 16.209 9.224 -3.992 1.00 42.47 O
ATOM 27 OP2 A B 7 14.832 10.987 -2.753 1.00 37.00 O
ATOM 28 O5' A B 7 14.364 8.595 -2.398 1.00 42.22 O
TER
ATOM 2 P A A 7 15.454 9.657 -2.767 1.00 38.47 P
ATOM 3 OP1 A A 7 16.209 9.224 -3.992 1.00 42.47 O
ATOM 4 OP2 A A 7 14.832 10.987 -2.753 1.00 37.00 O
ATOM 5 O5' A A 7 14.364 8.595 -2.398 1.00 42.22 O
ATOM 6 C5' A A 7 14.678 7.222 -2.344 1.00 47.85 C
ATOM 7 C4' A A 7 13.516 6.443 -1.829 1.00 46.53 C
ATOM 8 O4' A A 7 13.131 6.959 -0.529 1.00 45.48 O
ATOM 9 C3' A A 7 12.245 6.556 -2.644 1.00 47.09 C
ATOM 10 O3' A A 7 12.252 5.737 -3.796 1.00 47.17 O
ATOM 11 C2' A A 7 11.189 6.174 -1.620 1.00 48.63 C
ATOM 12 O2' A A 7 11.190 4.778 -1.396 1.00 51.55 O
ATOM 13 C1' A A 7 11.734 6.861 -0.373 1.00 46.64 C
ATOM 14 N9 A A 7 11.196 8.230 -0.210 1.00 45.62 N
ATOM 15 C8 A A 7 11.869 9.411 -0.412 1.00 44.01 C
ATOM 16 N7 A A 7 11.146 10.470 -0.163 1.00 43.07 N
ATOM 17 C5 A A 7 9.936 9.962 0.261 1.00 41.76 C
ATOM 18 C6 A A 7 8.760 10.568 0.677 1.00 42.64 C
ATOM 19 N6 A A 7 8.623 11.862 0.794 1.00 48.11 N
ATOM 20 N1 A A 7 7.729 9.777 1.025 1.00 44.98 N
ATOM 21 C2 A A 7 7.897 8.450 0.977 1.00 45.40 C
ATOM 22 N3 A A 7 8.951 7.771 0.588 1.00 46.51 N
ATOM 23 C4 A A 7 9.953 8.582 0.242 1.00 44.89 C
ATOM 24 P U A 8 11.535 6.217 -5.162 1.00 48.54 P
ATOM 25 OP1 U A 8 11.953 5.255 -6.235 1.00 50.52 O
ATOM 26 OP2 U A 8 11.821 7.653 -5.349 1.00 47.88 O
ATOM 27 O5' U A 8 9.994 6.005 -4.848 1.00 45.95 O
TER
ATOM 1 O3' A B 5 18.788 14.488 1.563 1.00 43.53 O
ATOM 2 P G B 6 17.995 14.215 0.184 1.00 45.70 P
ATOM 3 OP1 G B 6 19.015 14.226 -0.890 1.00 47.95 O
ATOM 4 OP2 G B 6 16.897 15.190 0.118 1.00 49.89 O
ATOM 5 O5' G B 6 17.363 12.755 0.348 1.00 42.88 O
ATOM 6 C5' G B 6 18.147 11.606 0.287 1.00 47.66 C
ATOM 7 C4' G B 6 17.346 10.372 0.612 1.00 42.35 C
ATOM 8 O4' G B 6 16.748 10.480 1.922 1.00 34.65 O
ATOM 9 C3' G B 6 16.148 10.045 -0.249 1.00 37.95 C
ATOM 10 O3' G B 6 16.499 9.578 -1.526 1.00 36.13 O
ATOM 11 C2' G B 6 15.511 8.975 0.600 1.00 33.17 C
ATOM 12 O2' G B 6 16.299 7.800 0.549 1.00 33.79 O
ATOM 13 C1' G B 6 15.664 9.597 1.991 1.00 32.93 C
ATOM 14 N9 G B 6 14.464 10.336 2.378 1.00 31.38 N
ATOM 15 C8 G B 6 14.223 11.687 2.420 1.00 32.48 C
ATOM 16 N7 G B 6 12.989 11.957 2.760 1.00 30.38 N
ATOM 17 C5 G B 6 12.405 10.710 2.967 1.00 29.76 C
ATOM 18 C6 G B 6 11.089 10.360 3.379 1.00 26.81 C
ATOM 19 O6 G B 6 10.169 11.119 3.678 1.00 26.15 O
ATOM 20 N1 G B 6 10.903 8.986 3.415 1.00 27.51 N
ATOM 21 C2 G B 6 11.859 8.052 3.137 1.00 30.70 C
ATOM 22 N2 G B 6 11.485 6.769 3.264 1.00 32.37 N
ATOM 23 N3 G B 6 13.087 8.352 2.781 1.00 30.30 N
ATOM 24 C4 G B 6 13.295 9.694 2.722 1.00 30.60 C
ATOM 25 P A B 7 15.454 9.657 -2.767 1.00 38.47 P
ATOM 26 OP1 A B 7 16.209 9.224 -3.992 1.00 42.47 O
ATOM 27 OP2 A B 7 14.832 10.987 -2.753 1.00 37.00 O
ATOM 28 O5' A B 7 14.364 8.595 -2.398 1.00 42.22 O
TER
Atoms:
OP1: (16.209,9.224,-3.992)
OP2: (14.832,10.987,-2.753)
C3': (12.245,6.556,-2.644)
C1': (11.734,6.861,-0.373)
C5': (14.678,7.222,-2.344)
O4': (13.131,6.959,-0.529)
C8: (11.869,9.411,-0.412)
O2': (11.190,4.778,-1.396)
C6: (8.760,10.568,0.677)
C5: (9.936,9.962,0.261)
C4: (9.953,8.582,0.242)
P: (15.454,9.657,-2.767)
C4': (13.516,6.443,-1.829)
C2': (11.189,6.174,-1.620)
C2: (7.897,8.450,0.977)
N1: (7.729,9.777,1.025)
N3: (8.951,7.771,0.588)
N6: (8.623,11.862,0.794)
N7: (11.146,10.470,-0.163)
N9: (11.196,8.230,-0.210)
O5': (14.364,8.595,-2.398)
O3': (12.252,5.737,-3.796)
OP2: (14.832,10.987,-2.753)
C3': (12.245,6.556,-2.644)
C1': (11.734,6.861,-0.373)
C5': (14.678,7.222,-2.344)
O4': (13.131,6.959,-0.529)
C8: (11.869,9.411,-0.412)
O2': (11.190,4.778,-1.396)
C6: (8.760,10.568,0.677)
C5: (9.936,9.962,0.261)
C4: (9.953,8.582,0.242)
P: (15.454,9.657,-2.767)
C4': (13.516,6.443,-1.829)
C2': (11.189,6.174,-1.620)
C2: (7.897,8.450,0.977)
N1: (7.729,9.777,1.025)
N3: (8.951,7.771,0.588)
N6: (8.623,11.862,0.794)
N7: (11.146,10.470,-0.163)
N9: (11.196,8.230,-0.210)
O5': (14.364,8.595,-2.398)
O3': (12.252,5.737,-3.796)
OP1: (19.015,14.226,-0.890)
OP2: (16.897,15.190,0.118)
C3': (16.148,10.045,-0.249)
C1': (15.664,9.597,1.991)
C5': (18.147,11.606,0.287)
O6: (10.169,11.119,3.678)
O4': (16.748,10.480,1.922)
C8: (14.223,11.687,2.420)
C2: (11.859,8.052,3.137)
C6: (11.089,10.360,3.379)
C5: (12.405,10.710,2.967)
C4: (13.295,9.694,2.722)
P: (17.995,14.215,0.184)
C4': (17.346,10.372,0.612)
C2': (15.511,8.975,0.600)
O2': (16.299,7.800,0.549)
N1: (10.903,8.986,3.415)
N2: (11.485,6.769,3.264)
N3: (13.087,8.352,2.781)
N7: (12.989,11.957,2.760)
N9: (14.464,10.336,2.378)
O5': (17.363,12.755,0.348)
O3': (16.499,9.578,-1.526)
OP2: (16.897,15.190,0.118)
C3': (16.148,10.045,-0.249)
C1': (15.664,9.597,1.991)
C5': (18.147,11.606,0.287)
O6: (10.169,11.119,3.678)
O4': (16.748,10.480,1.922)
C8: (14.223,11.687,2.420)
C2: (11.859,8.052,3.137)
C6: (11.089,10.360,3.379)
C5: (12.405,10.710,2.967)
C4: (13.295,9.694,2.722)
P: (17.995,14.215,0.184)
C4': (17.346,10.372,0.612)
C2': (15.511,8.975,0.600)
O2': (16.299,7.800,0.549)
N1: (10.903,8.986,3.415)
N2: (11.485,6.769,3.264)
N3: (13.087,8.352,2.781)
N7: (12.989,11.957,2.760)
N9: (14.464,10.336,2.378)
O5': (17.363,12.755,0.348)
O3': (16.499,9.578,-1.526)
Image (generated by PyMOL):