Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A2:A1
Extra
PDB:
ATOM 1 O3' G A 1 8.106 -3.541 18.297 1.00 56.43 O
ATOM 2 P A A 2 8.823 -3.354 16.870 1.00 55.82 P
ATOM 3 OP1 A A 2 10.149 -4.017 16.909 1.00 55.72 O
ATOM 4 OP2 A A 2 8.728 -1.914 16.506 1.00 55.26 O
ATOM 5 O5' A A 2 7.903 -4.185 15.880 1.00 53.03 O
ATOM 6 C5' A A 2 7.817 -5.594 15.991 1.00 51.32 C
ATOM 7 C4' A A 2 7.075 -6.140 14.809 1.00 49.43 C
ATOM 8 O4' A A 2 5.666 -5.818 14.928 1.00 48.16 O
ATOM 9 C3' A A 2 7.494 -5.502 13.505 1.00 48.31 C
ATOM 10 O3' A A 2 8.659 -6.134 13.012 1.00 48.66 O
ATOM 11 C2' A A 2 6.266 -5.722 12.634 1.00 47.38 C
ATOM 12 O2' A A 2 6.231 -7.032 12.106 1.00 45.76 O
ATOM 13 C1' A A 2 5.138 -5.512 13.653 1.00 46.63 C
ATOM 14 N9 A A 2 4.655 -4.134 13.716 1.00 45.43 N
ATOM 15 C8 A A 2 5.126 -3.118 14.513 1.00 45.03 C
ATOM 16 N7 A A 2 4.471 -1.988 14.375 1.00 45.06 N
ATOM 17 C5 A A 2 3.505 -2.278 13.419 1.00 44.35 C
ATOM 18 C6 A A 2 2.480 -1.507 12.837 1.00 43.36 C
ATOM 19 N6 A A 2 2.232 -0.230 13.146 1.00 43.22 N
ATOM 20 N1 A A 2 1.698 -2.105 11.915 1.00 43.31 N
ATOM 21 C2 A A 2 1.930 -3.390 11.607 1.00 43.50 C
ATOM 22 N3 A A 2 2.852 -4.218 12.085 1.00 44.12 N
ATOM 23 C4 A A 2 3.616 -3.596 12.998 1.00 44.78 C
ATOM 24 P C A 3 9.428 -5.494 11.763 1.00 48.10 P
ATOM 25 OP1 C A 3 10.761 -6.124 11.593 1.00 48.55 O
ATOM 26 OP2 C A 3 9.319 -4.016 11.886 1.00 47.97 O
ATOM 27 O5' C A 3 8.513 -5.918 10.541 1.00 47.08 O
TER
ATOM 1 O3' G B 0 5.945 2.038 20.158 1.00 70.52 O
ATOM 2 P G B 1 6.984 0.956 20.748 1.00 68.91 P
ATOM 3 OP1 G B 1 6.845 0.908 22.231 1.00 68.62 O
ATOM 4 OP2 G B 1 8.306 1.282 20.155 1.00 68.38 O
ATOM 5 O5' G B 1 6.531 -0.448 20.141 1.00 66.18 O
ATOM 6 C5' G B 1 7.070 -1.646 20.684 1.00 62.29 C
ATOM 7 C4' G B 1 6.512 -2.866 19.993 1.00 59.49 C
ATOM 8 O4' G B 1 5.058 -2.824 20.037 1.00 58.98 O
ATOM 9 C3' G B 1 6.820 -2.981 18.513 1.00 57.81 C
ATOM 10 O3' G B 1 8.106 -3.541 18.297 1.00 56.43 O
ATOM 11 C2' G B 1 5.709 -3.902 18.025 1.00 57.51 C
ATOM 12 O2' G B 1 5.944 -5.257 18.332 1.00 56.72 O
ATOM 13 C1' G B 1 4.530 -3.420 18.863 1.00 57.12 C
ATOM 14 N9 G B 1 3.712 -2.448 18.155 1.00 55.86 N
ATOM 15 C8 G B 1 3.719 -1.080 18.289 1.00 55.10 C
ATOM 16 N7 G B 1 2.851 -0.488 17.514 1.00 55.02 N
ATOM 17 C5 G B 1 2.239 -1.529 16.825 1.00 54.19 C
ATOM 18 C6 G B 1 1.206 -1.512 15.851 1.00 53.76 C
ATOM 19 O6 G B 1 0.597 -0.540 15.389 1.00 52.60 O
ATOM 20 N1 G B 1 0.894 -2.796 15.416 1.00 53.12 N
ATOM 21 C2 G B 1 1.494 -3.945 15.859 1.00 53.54 C
ATOM 22 N2 G B 1 1.070 -5.089 15.307 1.00 53.43 N
ATOM 23 N3 G B 1 2.446 -3.975 16.775 1.00 53.95 N
ATOM 24 C4 G B 1 2.767 -2.742 17.208 1.00 54.84 C
ATOM 25 P A B 2 8.823 -3.354 16.870 1.00 55.82 P
ATOM 26 OP1 A B 2 10.149 -4.017 16.909 1.00 55.72 O
ATOM 27 OP2 A B 2 8.728 -1.914 16.506 1.00 55.26 O
ATOM 28 O5' A B 2 7.903 -4.185 15.880 1.00 53.03 O
TER
ATOM 2 P A A 2 8.823 -3.354 16.870 1.00 55.82 P
ATOM 3 OP1 A A 2 10.149 -4.017 16.909 1.00 55.72 O
ATOM 4 OP2 A A 2 8.728 -1.914 16.506 1.00 55.26 O
ATOM 5 O5' A A 2 7.903 -4.185 15.880 1.00 53.03 O
ATOM 6 C5' A A 2 7.817 -5.594 15.991 1.00 51.32 C
ATOM 7 C4' A A 2 7.075 -6.140 14.809 1.00 49.43 C
ATOM 8 O4' A A 2 5.666 -5.818 14.928 1.00 48.16 O
ATOM 9 C3' A A 2 7.494 -5.502 13.505 1.00 48.31 C
ATOM 10 O3' A A 2 8.659 -6.134 13.012 1.00 48.66 O
ATOM 11 C2' A A 2 6.266 -5.722 12.634 1.00 47.38 C
ATOM 12 O2' A A 2 6.231 -7.032 12.106 1.00 45.76 O
ATOM 13 C1' A A 2 5.138 -5.512 13.653 1.00 46.63 C
ATOM 14 N9 A A 2 4.655 -4.134 13.716 1.00 45.43 N
ATOM 15 C8 A A 2 5.126 -3.118 14.513 1.00 45.03 C
ATOM 16 N7 A A 2 4.471 -1.988 14.375 1.00 45.06 N
ATOM 17 C5 A A 2 3.505 -2.278 13.419 1.00 44.35 C
ATOM 18 C6 A A 2 2.480 -1.507 12.837 1.00 43.36 C
ATOM 19 N6 A A 2 2.232 -0.230 13.146 1.00 43.22 N
ATOM 20 N1 A A 2 1.698 -2.105 11.915 1.00 43.31 N
ATOM 21 C2 A A 2 1.930 -3.390 11.607 1.00 43.50 C
ATOM 22 N3 A A 2 2.852 -4.218 12.085 1.00 44.12 N
ATOM 23 C4 A A 2 3.616 -3.596 12.998 1.00 44.78 C
ATOM 24 P C A 3 9.428 -5.494 11.763 1.00 48.10 P
ATOM 25 OP1 C A 3 10.761 -6.124 11.593 1.00 48.55 O
ATOM 26 OP2 C A 3 9.319 -4.016 11.886 1.00 47.97 O
ATOM 27 O5' C A 3 8.513 -5.918 10.541 1.00 47.08 O
TER
ATOM 1 O3' G B 0 5.945 2.038 20.158 1.00 70.52 O
ATOM 2 P G B 1 6.984 0.956 20.748 1.00 68.91 P
ATOM 3 OP1 G B 1 6.845 0.908 22.231 1.00 68.62 O
ATOM 4 OP2 G B 1 8.306 1.282 20.155 1.00 68.38 O
ATOM 5 O5' G B 1 6.531 -0.448 20.141 1.00 66.18 O
ATOM 6 C5' G B 1 7.070 -1.646 20.684 1.00 62.29 C
ATOM 7 C4' G B 1 6.512 -2.866 19.993 1.00 59.49 C
ATOM 8 O4' G B 1 5.058 -2.824 20.037 1.00 58.98 O
ATOM 9 C3' G B 1 6.820 -2.981 18.513 1.00 57.81 C
ATOM 10 O3' G B 1 8.106 -3.541 18.297 1.00 56.43 O
ATOM 11 C2' G B 1 5.709 -3.902 18.025 1.00 57.51 C
ATOM 12 O2' G B 1 5.944 -5.257 18.332 1.00 56.72 O
ATOM 13 C1' G B 1 4.530 -3.420 18.863 1.00 57.12 C
ATOM 14 N9 G B 1 3.712 -2.448 18.155 1.00 55.86 N
ATOM 15 C8 G B 1 3.719 -1.080 18.289 1.00 55.10 C
ATOM 16 N7 G B 1 2.851 -0.488 17.514 1.00 55.02 N
ATOM 17 C5 G B 1 2.239 -1.529 16.825 1.00 54.19 C
ATOM 18 C6 G B 1 1.206 -1.512 15.851 1.00 53.76 C
ATOM 19 O6 G B 1 0.597 -0.540 15.389 1.00 52.60 O
ATOM 20 N1 G B 1 0.894 -2.796 15.416 1.00 53.12 N
ATOM 21 C2 G B 1 1.494 -3.945 15.859 1.00 53.54 C
ATOM 22 N2 G B 1 1.070 -5.089 15.307 1.00 53.43 N
ATOM 23 N3 G B 1 2.446 -3.975 16.775 1.00 53.95 N
ATOM 24 C4 G B 1 2.767 -2.742 17.208 1.00 54.84 C
ATOM 25 P A B 2 8.823 -3.354 16.870 1.00 55.82 P
ATOM 26 OP1 A B 2 10.149 -4.017 16.909 1.00 55.72 O
ATOM 27 OP2 A B 2 8.728 -1.914 16.506 1.00 55.26 O
ATOM 28 O5' A B 2 7.903 -4.185 15.880 1.00 53.03 O
TER
Atoms:
OP1: (10.149,-4.017,16.909)
OP2: (8.728,-1.914,16.506)
C3': (7.494,-5.502,13.505)
C1': (5.138,-5.512,13.653)
C5': (7.817,-5.594,15.991)
O4': (5.666,-5.818,14.928)
C8: (5.126,-3.118,14.513)
O2': (6.231,-7.032,12.106)
C6: (2.480,-1.507,12.837)
C5: (3.505,-2.278,13.419)
C4: (3.616,-3.596,12.998)
P: (8.823,-3.354,16.870)
C4': (7.075,-6.140,14.809)
C2': (6.266,-5.722,12.634)
C2: (1.930,-3.390,11.607)
N1: (1.698,-2.105,11.915)
N3: (2.852,-4.218,12.085)
N6: (2.232,-0.230,13.146)
N7: (4.471,-1.988,14.375)
N9: (4.655,-4.134,13.716)
O5': (7.903,-4.185,15.880)
O3': (8.659,-6.134,13.012)
OP2: (8.728,-1.914,16.506)
C3': (7.494,-5.502,13.505)
C1': (5.138,-5.512,13.653)
C5': (7.817,-5.594,15.991)
O4': (5.666,-5.818,14.928)
C8: (5.126,-3.118,14.513)
O2': (6.231,-7.032,12.106)
C6: (2.480,-1.507,12.837)
C5: (3.505,-2.278,13.419)
C4: (3.616,-3.596,12.998)
P: (8.823,-3.354,16.870)
C4': (7.075,-6.140,14.809)
C2': (6.266,-5.722,12.634)
C2: (1.930,-3.390,11.607)
N1: (1.698,-2.105,11.915)
N3: (2.852,-4.218,12.085)
N6: (2.232,-0.230,13.146)
N7: (4.471,-1.988,14.375)
N9: (4.655,-4.134,13.716)
O5': (7.903,-4.185,15.880)
O3': (8.659,-6.134,13.012)
OP1: (6.845,0.908,22.231)
OP2: (8.306,1.282,20.155)
C3': (6.820,-2.981,18.513)
C1': (4.530,-3.420,18.863)
C5': (7.070,-1.646,20.684)
O6: (0.597,-0.540,15.389)
O4': (5.058,-2.824,20.037)
C8: (3.719,-1.080,18.289)
C2: (1.494,-3.945,15.859)
C6: (1.206,-1.512,15.851)
C5: (2.239,-1.529,16.825)
C4: (2.767,-2.742,17.208)
P: (6.984,0.956,20.748)
C4': (6.512,-2.866,19.993)
C2': (5.709,-3.902,18.025)
O2': (5.944,-5.257,18.332)
N1: (0.894,-2.796,15.416)
N2: (1.070,-5.089,15.307)
N3: (2.446,-3.975,16.775)
N7: (2.851,-0.488,17.514)
N9: (3.712,-2.448,18.155)
O5': (6.531,-0.448,20.141)
O3': (8.106,-3.541,18.297)
OP2: (8.306,1.282,20.155)
C3': (6.820,-2.981,18.513)
C1': (4.530,-3.420,18.863)
C5': (7.070,-1.646,20.684)
O6: (0.597,-0.540,15.389)
O4': (5.058,-2.824,20.037)
C8: (3.719,-1.080,18.289)
C2: (1.494,-3.945,15.859)
C6: (1.206,-1.512,15.851)
C5: (2.239,-1.529,16.825)
C4: (2.767,-2.742,17.208)
P: (6.984,0.956,20.748)
C4': (6.512,-2.866,19.993)
C2': (5.709,-3.902,18.025)
O2': (5.944,-5.257,18.332)
N1: (0.894,-2.796,15.416)
N2: (1.070,-5.089,15.307)
N3: (2.446,-3.975,16.775)
N7: (2.851,-0.488,17.514)
N9: (3.712,-2.448,18.155)
O5': (6.531,-0.448,20.141)
O3': (8.106,-3.541,18.297)
Image (generated by PyMOL):